BAC Information

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BAC

Clone NameB6Ng01-240O15
Chromosome12 (Build37)
Map Location 31,434,154 - 31,435,270
singlet/doubletsinglet
Overlap genenone
Upstream geneMyt1l, Pxdn, Tpo, Sntg2, Tmem18
Downstream geneLOC100043055, Acp1, Sh3yl1, LOC629656, 9030611O19Rik, LOC668781, LOC100043065, LOC100043514, EG629667, LOC100043068, Lamb1-1, Dld, LOC668786, Slc26a3, Cbll1, Slc26a4, LOC100043531, Bcap29, Dus4l, LOC100043081, Gpr22
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240O15.bB6Ng01-240O15.g
ACCGA050960GA050961
length1,2141,120
definitionB6Ng01-240O15.b B6Ng01-240O15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattatcagaccttcaaagaagacctaatactaatactcttcaa
actactccacaaaatagaaacaaaagaaacactacccaattcattctatg
aagccaaaattactctgatgcctaaaacacatgaagacccaacaaagaaa
gagaacttcagaccaatttccctatgaatattgatgcaaaaatactcaat
aaaattctcacaaagtgaatccaagaacacatcaaaatgatcatccatca
tgatcaagtaggcttcatcccagggatgcagggatggttcaatatacaga
aatcaatcaatgtaatccactatataaacaaactcaaagaaaacaaacca
catgatcatttcattagatgctaagaaagcatttgacaaaatccaacacc
cattcatgataaaaaccttggaaagatcgggaattcaaggctcatgccta
aacatagtaaaagcaatatacagcaaatcagtagccaacaacaaactaaa
tggcgagaaacttgaagcaatcacattgaaatcagggactagaacaaggc
ttgcccattctctccctacctgaccaatatagtactcaaagtcctagcca
gagcaattagacgataaaaggccaaagggatacacattggaaaggaagaa
gtcaaaatatcactatttgcagatgatataataatatacttaagtgaccc
aaaaattccaccagagaactcctaaatctgataaacaacttcagcaaaat
agttggatataaaattaacttaaaaaaaaaatcaggccttccggtccacg
ccagaccggtacaccttgggaagagagtctatggacacccccaaggtctc
cacaggatcttaggacctctggtgagtggatcacaacttctgccaggagg
caggttcaaacaccagatatctgggcacctttccctgcaagaggagagct
ggcctgcagagagtactctgaacactgaaactcagagagacctagtctcc
caggtctgctgatagaggctaacatatcacctgagaacagctctaccaga
agacactataacacttaacttcagagactaccagaatggctaagggcaag
taagatcttactacggaatcaggacacttcacatcatcgaggagccctcc
aactccacctagtctgaccatcactcgaaagatgaacctggattaagcat
atctctctgtgatg
gaattcattactcctaagttgccatgtatggatattcattcatccaatag
atcatccagcgagctataaggtaagcgcaggagatgtactactcaaacca
agtcaatataaaacacaatgttcccttcccactctcatgattatgtcctt
gtaacagctgtacatctaatcataaaaagtagaaattgcagggaaacggg
acttcactttaccctaggagggcatgagcaaaattgcaggcttcctgttt
acccagtcctaacttccatcacgtctgtttgctgctctcaagctgatgct
atgatgtttccataaaaacaggtacttgctatctgctattagagtccctc
catccaagtctccttttgaaccattaattctattatttattctgtccctt
atcttgaagctgtgctcttcaaccaggctcatccgcttgtagatgtgtgt
gtctcacccctatccctcctcttcccttcctgacactggatgcccttgat
cctgatacactgtgccccgaacaggcagattcctctcgaatggcagggct
gcaagttcagccaacacatctgctcatgacagagtaacagctttcctgtg
ggtacctgcctctgtcttttccaccttcatggctcagagtatgttttcca
tgctcaacattaaaaataaagaaagctcatttgtaatttcaactaacagt
caaggaggaaggctggaagcatcattgtgatttatctctatacactagaa
tgcctctatggatagttcatgcaggaaacaggaggtagctctgttggcct
tgaactagggacagtgacacaacatggaaggtttcatgacattggtgctg
tatgtggtacgacatacctgtactatgtacctatacccctgctgttctaa
ttcctacagacacagtctgcaatcatgggctgaatctgtagaattctgat
gggagttgtgtttgaacctggaaatcagaatgggaggcagtaggttgaca
gataagggagcagagtgcagggaacttaacaaaacccttgaaaactatcg
gaactagcaagcctagaggcattcttagtagactgggagtcattcataag
aatgttcaggaactaagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_31434154_31435270
seq2: B6Ng01-240O15.g_69_1188

seq1  GAATTCATTACTCCTAAGTTGCCATGTATGGATATTCATTCATCCAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACTCCTAAGTTGCCATGTATGGATATTCATTCATCCAATAG  50

seq1  ATCATCCAGCGAGCTATAAGGTAAGCGCAGGAGATGTACTACTCAAACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCAGCGAGCTATAAGGTAAGCGCAGGAGATGTACTACTCAAACCA  100

seq1  AGTCAATATAAAACACAATGTTCCCTTCCCACTCTCATGATTATGTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATATAAAACACAATGTTCCCTTCCCACTCTCATGATTATGTCCTT  150

seq1  GTAACAGCTGTACATCTAATCATAAAAAGTAGAAATTGCAGGGAAACGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAGCTGTACATCTAATCATAAAAAGTAGAAATTGCAGGGAAACGGG  200

seq1  ACTTCACTTTACCCTAGGAGGGCATGAGCAAAATTGCAGGCTTCCTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACTTTACCCTAGGAGGGCATGAGCAAAATTGCAGGCTTCCTGTTT  250

seq1  ACCCAGTCCTAACTTCCATCACGTCTGTTTGCTGCTCTCAAGCTGATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTCCTAACTTCCATCACGTCTGTTTGCTGCTCTCAAGCTGATGCT  300

seq1  ATGATGTTTCCATAAAAACAGGTACTTGCTATCTGCTATTAGAGTCCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTTTCCATAAAAACAGGTACTTGCTATCTGCTATTAGAGTCCCTC  350

seq1  CATCCAAGTCTCCTTTTGAACCATTAATTCTATTATTTATTCTGTCCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAAGTCTCCTTTTGAACCATTAATTCTATTATTTATTCTGTCCCTT  400

seq1  ATCTTGAAGCTGTGCTCTTCAACCAGGCTCATCCGCTTGTAGATGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAAGCTGTGCTCTTCAACCAGGCTCATCCGCTTGTAGATGTGTGT  450

seq1  GTCTCACCCCTATCCCTCCTCTTCCCTTCCTGACACTGGATGCCCTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACCCCTATCCCTCCTCTTCCCTTCCTGACACTGGATGCCCTTGAT  500

seq1  CCTGATACACTGTGCCCCGAACAGGCAGATTCCTCTCGAATGGCAGGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATACACTGTGCCCCGAACAGGCAGATTCCTCTCGAATGGCAGGGCT  550

seq1  GCAAGTTCAGCCAACACATCTGCTCATGACAGAGTAACAGCTTTCCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTCAGCCAACACATCTGCTCATGACAGAGTAACAGCTTTCCTGTG  600

seq1  GGTACCTGCCTCTGTCTTTTCCACCTTCATGGCTCAGAGTATGTTTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCTGCCTCTGTCTTTTCCACCTTCATGGCTCAGAGTATGTTTTCCA  650

seq1  TGCTCAACATTAAAAATAAAGAAAGCTCATTTGTAATTTCAACTAACAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAACATTAAAAATAAAGAAAGCTCATTTGTAATTTCAACTAACAGT  700

seq1  CAAGGAGGAAGGCTGGAAGCATCATTGTGATTTATCTCTATACACTAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGGAAGGCTGGAAGCATCATTGTGATTTATCTCTATACACTAGAA  750

seq1  TGCCTCTATGGATAGTTCATGCAGGAAACAGGAGGTAGCTCTGTTGGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTATGGATAGTTCATGCAGGAAACAGGAGGTAGCTCTGTTGGCCT  800

seq1  TGAACTAGGGACAGTGACACAACATGGAAGGTTTCATGACATTGGTGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTAGGGACAGTGACACAACATGGAAGGTTTCATGACATTGGTGCTG  850

seq1  TATGTGGTACGACATACCTGTACTATGTACCTATACCCCTGCTGTTCTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGTACGACATACCTGTACTATGTACCTATACCCCTGCTGTTCTAA  900

seq1  TTCCTACAGACACAGTCTGCAATCATGGGCTGAATCTGTAGAATTCTGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACAGACACAGTCTGCAATCATGGGCTGAATCTGTAGAATTCTGAT  950

seq1  GGGAGTTGTGTTTGAACCTGGAAATCAGGAATGGGAGGCAGTAGGTTGAC  1000
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGGAGTTGTGTTTGAACCTGGAAATCA-GAATGGGAGGCAGTAGGTTGAC  999

seq1  AGATAAGGGAGCAGAAGTGCAGGGAACTT-ACAAAACCC-TGAAAACTAT  1048
      |||||||||||||| |||||||||||||| ||||||||| ||||||||||
seq2  AGATAAGGGAGCAG-AGTGCAGGGAACTTAACAAAACCCTTGAAAACTAT  1048

seq1  CGGAACTAGCAAGCCTAGAGGCAT--CTAGTAGGACTGGGAGCCA-TCAT  1095
      ||||||||||||||||||||||||   ||||| ||||||||| || ||||
seq2  CGGAACTAGCAAGCCTAGAGGCATTCTTAGTA-GACTGGGAGTCATTCAT  1097

seq1  AAGAATG-TCAGGGACTAAGAGA  1117
      ||||||| ||||| |||||||||
seq2  AAGAATGTTCAGGAACTAAGAGA  1120