BAC Information

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BAC

Clone NameB6Ng01-242J04
Chromosome12 (Build37)
Map Location 64,930,026 - 65,051,385
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665741, EG382606
Downstream geneLOC435302, EG623046, LOC623123, LOC217645, LOC217647, Gm527, Klhl28
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242J04.bB6Ng01-242J04.g
ACCGA052179GA052180
length9321,082
definitionB6Ng01-242J04.b B6Ng01-242J04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,050,856 - 65,051,385)(64,930,026 - 64,931,100)
sequence
gaattcccaggaagccaagtccccaaccattactcaaatgctcgtttctt
tccttctcagaactttctctgccaacctataaatatttgaacacaataaa
attcttaaaaggaataggaagagggattgtgggtcacaaggggtttagga
actcctaaggaagaccaaaaaagtcaatgaacctgtacccttggggttct
cagagtctgaaccagcaaccaaagaacatatacagactagtcctaaccat
ccccacacatatgtagcagatgtgcagtttagtttgcatgtgggtcatga
acaactggagcatgggctatcccataaggtgttgcctgtatgtgcgatat
gttctactaggtgggctgccttgtttggcctcagtgagagaagcgtcttg
ccttgcctagacttttagtgctgggtgggagatgatacccttgaggcccc
acctgctcagaggagaaggtgagggagaacagggaagagctgtcgaaggg
agtgactgggagggggcagtgagcaggatgtaaagtgaataagtaaaaat
taattaaattaaaaaaaaaaaaccaatataagcctggcagtggtggcaca
tgcctttaatcccagcacttgggaggcagaggcaggctgatttctgagtt
cgggggcagcctggtctacagagtgagttccaggacagccaggactatac
aaagaaaccctgtctcaaaacaaaacaaaaacagcaaaatataataaaaa
ttagttaattcatttcgtgaacaacaagtataaatatgatatattcggct
taataggaaagaattgtttgtaaaactttccaccttgataacagttcttg
gtaaaatattaaaacaaaacaccttcccaagccctaacctgaatcatcat
ttagaaaataaaatctgaacaatttcgcagtt
gaattctttcttactgcttgaccaaagaaagtgataaaaagtattgcctg
gagagatggatcagtggtcaagagcagtgactgctcttgcagaggatctg
tgtttgggaccagaaaaccacattgtgatttgtaactgtctataactcca
gttccagagtacttgataatctcttctgatgtttgagagaaacatgccca
tcagcagtgcatatgcatatatgtatatgcaggcataacacaatgaacac
aaaaataaaatgtttaaaaatgttaaaaaattagagctattcttacatca
atgtctagactgcaaattgaaacaaatttgaacattactgccgaatgcaa
ttttaatattaataaatattttaatataaacatgtaatgaagaggaccag
gtctttagcagagttacctaatgaccatggtgagtgttacttacaacagg
gaagtaattataaaaggaacaaacaaaagaattacagatagagccataat
ccttttatcttcattggtgaaatataccagttagtttttcaacacctata
tgatacaaatttgccatgtaataatctacatcaatgaattatccaattct
tcagttttatacttttctgaagggatatttcataagatggattctttcct
ctatttctttctcctctcttctttctcctctcttctttcttcttttgttc
tttccttcttttctttctttctttctctctctttctttctttctttcttt
ctttctttccttctttctcttttctttcttcctttcttttgttgttgttt
tgttaggtagttttgtttgagacaaggtctcattgtgtattccctttggc
atggaaattttgtagtttgctgtgtagagttgactttaacgcacattgat
ccacctgcctctgtctcctatgtgctagaatttaaggtctaagttaacac
acacacacacacacgcacacacagttatttagtttagctgatcaaataaa
tctctgaccacatttctgtttcacttgtaccttggataggagatttaaga
gtaactctgtagaggttttagaagaaactagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_65050856_65051385
seq2: B6Ng01-242J04.b_43_572 (reverse)

seq1  CATCCTGCTCACTGCCCCCTCCCAGTCACTCCCTTCGACAGCTCTTCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGCTCACTGCCCCCTCCCAGTCACTCCCTTCGACAGCTCTTCCCT  50

seq1  GTTCTCCCTCACCTTCTCCTCTGAGCAGGTGGGGCCTCAAGGGTATCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCCTCACCTTCTCCTCTGAGCAGGTGGGGCCTCAAGGGTATCATC  100

seq1  TCCCACCCAGCACTAAAAGTCTAGGCAAGGCAAGACGCTTCTCTCACTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCCAGCACTAAAAGTCTAGGCAAGGCAAGACGCTTCTCTCACTGA  150

seq1  GGCCAAACAAGGCAGCCCACCTAGTAGAACATATCGCACATACAGGCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAACAAGGCAGCCCACCTAGTAGAACATATCGCACATACAGGCAAC  200

seq1  ACCTTATGGGATAGCCCATGCTCCAGTTGTTCATGACCCACATGCAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTATGGGATAGCCCATGCTCCAGTTGTTCATGACCCACATGCAAACT  250

seq1  AAACTGCACATCTGCTACATATGTGTGGGGATGGTTAGGACTAGTCTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCACATCTGCTACATATGTGTGGGGATGGTTAGGACTAGTCTGTA  300

seq1  TATGTTCTTTGGTTGCTGGTTCAGACTCTGAGAACCCCAAGGGTACAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCTTTGGTTGCTGGTTCAGACTCTGAGAACCCCAAGGGTACAGGT  350

seq1  TCATTGACTTTTTTGGTCTTCCTTAGGAGTTCCTAAACCCCTTGTGACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGACTTTTTTGGTCTTCCTTAGGAGTTCCTAAACCCCTTGTGACCC  400

seq1  ACAATCCCTCTTCCTATTCCTTTTAAGAATTTTATTGTGTTCAAATATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCCTCTTCCTATTCCTTTTAAGAATTTTATTGTGTTCAAATATTT  450

seq1  ATAGGTTGGCAGAGAAAGTTCTGAGAAGGAAAGAAACGAGCATTTGAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTTGGCAGAGAAAGTTCTGAGAAGGAAAGAAACGAGCATTTGAGTA  500

seq1  ATGGTTGGGGACTTGGCTTCCTGGGAATTC  530
      ||||||||||||||||||||||||||||||
seq2  ATGGTTGGGGACTTGGCTTCCTGGGAATTC  530

seq1: chr12_64930026_64931100
seq2: B6Ng01-242J04.g_68_1149

seq1  GAATTCTTTCTTACTGCTTGACCAAAGAAAGTGATAAAAAGTATTGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTACTGCTTGACCAAAGAAAGTGATAAAAAGTATTGCCTG  50

seq1  GAGAGATGGATCAGTGGTCAAGAGCAGTGACTGCTCTTGCAGAGGATCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATGGATCAGTGGTCAAGAGCAGTGACTGCTCTTGCAGAGGATCTG  100

seq1  TGTTTGGGACCAGAAAACCACATTGTGATTTGTAACTGTCTATAACTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGGACCAGAAAACCACATTGTGATTTGTAACTGTCTATAACTCCA  150

seq1  GTTCCAGAGTACTTGATAATCTCTTCTGATGTTTGAGAGAAACATGCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGAGTACTTGATAATCTCTTCTGATGTTTGAGAGAAACATGCCCA  200

seq1  TCAGCAGTGCATATGCATATATGTATATGCAGGCATAACACAATGAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGTGCATATGCATATATGTATATGCAGGCATAACACAATGAACAC  250

seq1  AAAAATAAAATGTTTAAAAATGTTAAAAAATTAGAGCTATTCTTACATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAATGTTTAAAAATGTTAAAAAATTAGAGCTATTCTTACATCA  300

seq1  ATGTCTAGACTGCAAATTGAAACAAATTTGAACATTACTGCCGAATGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTAGACTGCAAATTGAAACAAATTTGAACATTACTGCCGAATGCAA  350

seq1  TTTTAATATTAATAAATATTTTAATATAAACATGTAATGAAGAGGACCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATATTAATAAATATTTTAATATAAACATGTAATGAAGAGGACCAG  400

seq1  GTCTTTAGCAGAGTTACCTAATGACCATGGTGAGTGTTACTTACAACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTAGCAGAGTTACCTAATGACCATGGTGAGTGTTACTTACAACAGG  450

seq1  GAAGTAATTATAAAAGGAACAAACAAAAGAATTACAGATAGAGCCATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAATTATAAAAGGAACAAACAAAAGAATTACAGATAGAGCCATAAT  500

seq1  CCTTTTATCTTCATTGGTGAAATATACCAGTTAGTTTTTCAACACCTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTATCTTCATTGGTGAAATATACCAGTTAGTTTTTCAACACCTATA  550

seq1  TGATACAAATTTGCCATGTAATAATCTACATCAATGAATTATCCAATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACAAATTTGCCATGTAATAATCTACATCAATGAATTATCCAATTCT  600

seq1  TCAGTTTTATACTTTTCTGAAGGGATATTTCATAAGATGGATTCTTTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTTATACTTTTCTGAAGGGATATTTCATAAGATGGATTCTTTCCT  650

seq1  CTATTTCTTTCTCCTCTCTTCTTTCTCCTCTCTTCTTTCTTCTTTTGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCTTTCTCCTCTCTTCTTTCTCCTCTCTTCTTTCTTCTTTTGTTC  700

seq1  TTTCCTTCTTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTTTCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTCTTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTTTCTTT  750

seq1  CTTTCTTTCCTTCTTTCTCTTTTCTTTCTTCCTTTCTTTTGTTGTTGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCCTTCTTTCTCTTTTCTTTCTTCCTTTCTTTTGTTGTTGTTT  800

seq1  TGTTAGGTAGTTTTGTTTGAGACAAGGTCTCATTGTGTATTCCCTTTGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGGTAGTTTTGTTTGAGACAAGGTCTCATTGTGTATTCCCTTTGGC  850

seq1  ATGGAAA-TTTGTAGTTTGCTGTGTAGAGTTGACTTTAACGCACATTGAT  899
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAATTTTGTAGTTTGCTGTGTAGAGTTGACTTTAACGCACATTGAT  900

seq1  CCACCTGCCTCTGTCTCCTATGTGCTAGAATTTAAGGTCTAAGTTAACAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGCCTCTGTCTCCTATGTGCTAGAATTTAAGGTCTAAGTTAACAC  950

seq1  ACACACACACACACGCACACACAGTTATTTAG-TTAGCTGATCAAATAAA  998
      |||||||||||||||||||||||||||||||| |||||||||||||| ||
seq2  ACACACACACACACGCACACACAGTTATTTAGTTTAGCTGATCAAAT-AA  999

seq1  ATCTCTGA-CACA-TTCTG-TTCACTTGTACCTTGGATAAGGAGATTT-A  1044
      |||||||| |||| ||||| |||||||||||||||||| ||||||||| |
seq2  ATCTCTGACCACATTTCTGTTTCACTTGTACCTTGGAT-AGGAGATTTAA  1048

seq1  GAGT-ACTCTGTAGAGGTTTTAGA--GAACTAGC  1075
      |||| |||||||||||||||||||   |||||||
seq2  GAGTAACTCTGTAGAGGTTTTAGAAGAAACTAGC  1082