BAC Information

Click to search

BAC

Clone NameB6Ng01-244D11
Chromosome12 (Build37)
Map Location 120,843,704 - 120,844,869
singlet/doubletsinglet
Overlap geneLOC668632
Upstream geneEG668615, LOC620665, Sp8, Abcb5, Itgb8, EG627557, LOC100043011, 4732474O15Rik
Downstream geneLOC668633, Gm528, LOC100043017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244D11.bB6Ng01-244D11.g
ACCGA053406GA053407
length1,1901,167
definitionB6Ng01-244D11.b B6Ng01-244D11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaatagactggactagaaaagaaattcctcccgacacataata
atcagaacaacaaatgcactaaataaagatagaatactaaaagcagtaag
ggaaaaaggtcaagtaacatataaaggcaagcctatcagaattacaaaag
atttttcaccagagactatgaaagccagaagagcctggacagatgttata
cagacactaagagaacacaaattccagtccaggctactatacccagccaa
atactcaattaccatagatggagaaaccaaagtattccacaacaaaacca
aattcacacattatctttccatgaatccagcccttcaaaggataataaca
gaaaaaaccaatacaaggatggaaaccacgtcctagaaaaagcaaaaagg
taatccctcaacaaacctaaaagaagacagtcacaagaacagaatgccaa
ctttaacaacaaaaataataggaaggaacaattacttttccttaatatct
cttaatatcaagggactctattccccagtaaaaagacatagactaacaaa
ctggctacacaaacaggacccaacattttgctgctgcaggaaactcatct
cagagaaaaagatagacactacctcagagtgaaaggctggaaaacaattt
tccaagcaaatggtatgaagaaacaagctggagtagccattctaatatat
aataaaatcaacttccatcccaaagtcatcaaaaaagacaaggaagggca
ctccatactcatccaaggtaaaatcctccaagaggaactatcaattctga
atatctatgctccaaatacaagggcagccacattcattaaagaaacttta
gtaaagctcaaagtacacattgcaactcacacaataatagtggggagact
tcaacacaccacttttaccaatggacagatcatggaaacagaaactaaca
aggacacatgaaactaacagaagttatgaaacaaatggatctaacagatt
atcttaacataacatttttatctaaaacaaaagggatataaccttcttct
aagcactcatggtacattctcaaaattggacatataatgggtcaacaaaa
agcggaacatataccaaaggtaatgaattgtcatgcatcctttcgaatca
catgacctatgcctggtatccttccattaccgaaagaagg
gaattctctttagagttctatagaccaggctggccttgtctatagcggta
tgcctgcctttaccttctaagtgatgggactaaaggcatgtgccaccact
gccaggcctcatttagattttttatagctacatagttaatactattttgc
ctttttacagcctttcaaaatatgaaaatgcattagtgctgcttataagg
caatttgaaattgagcaatccatttattccactgttatctcttcttggac
cttctgacaataggatactcatagcatagtcaagtatgctgtcagaccta
atagaaggtttagaacatactagaatctagctcagaagtaacaaagtcta
ataccccaaggcctagggtagaaaatattacatagttaagtggaagatgc
tagaaactcgttggtaaagatgcaagcccaccacttgctaaattcatgaa
cgcttagatggaggtttctcagttaagcatgagaaatatctggaaatata
ttttgccacatagtgactatacctagcatcatacactattcttgcaaagt
ggtaaaaatagaagtaaagtatttttataaaccaatttcactggataaat
aatatgtacttagatttatttagtctcttcaaaatactatggtgcattta
atcagcatagttccatctgtcagttagaaaactaattgaaaatttaataa
aggacaagaagaaattaagaaaacatgttgctaatgcgatttttgctaaa
gaacaatccagtttcaaacctctgattttattttaattcctgtccttttt
tattttttaattttttgggaaaaaggctgaattccagtttacaaaactag
ggtgcagcctacataagaaaagaatccactttattctgattcctgatcta
ttatttcatgcacttacataattttcattgtgttactcccgaagattctt
ttaacaggatgatgaaactgttagcacctttgaacataatatgggattcc
atagtcagatttttaaaaaagaaaagaaacctgctatactattttgccta
attagttatgagtcatatgctttgggagtttatttttgattagacttatt
tccatcatttcaaagtgtatggtaattgaacattgagttccttaatattt
ttctggaaccctctcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_120843704_120844869
seq2: B6Ng01-244D11.g_67_1233

seq1  GAATTCTCTTTAGAGTTCTATAGACCAGGCTGGCCTTGTCTATAGCGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTAGAGTTCTATAGACCAGGCTGGCCTTGTCTATAGCGGTA  50

seq1  TGCCTGCCTTTACCTTCTAAGTGATGGGACTAAAGGCATGTGCCACCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCCTTTACCTTCTAAGTGATGGGACTAAAGGCATGTGCCACCACT  100

seq1  GCCAGGCCTCATTTAGATTTTTTATAGCTACATAGTTAATACTATTTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCCTCATTTAGATTTTTTATAGCTACATAGTTAATACTATTTTGC  150

seq1  CTTTTTACAGCCTTTCAAAATATGAAAATGCATTAGTGCTGCTTATAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTACAGCCTTTCAAAATATGAAAATGCATTAGTGCTGCTTATAAGG  200

seq1  CAATTTGAAATTGAGCAATCCATTTATTCCACTGTTATCTCTTCTTGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGAAATTGAGCAATCCATTTATTCCACTGTTATCTCTTCTTGGAC  250

seq1  CTTCTGACAATAGGATACTCATAGCATAGTCAAGTATGCTGTCAGACCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGACAATAGGATACTCATAGCATAGTCAAGTATGCTGTCAGACCTA  300

seq1  ATAGAAGGTTTAGAACATACTAGAATCTAGCTCAGAAGTAACAAAGTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGGTTTAGAACATACTAGAATCTAGCTCAGAAGTAACAAAGTCTA  350

seq1  ATACCCCAAGGCCTAGGGTAGAAAATATTACATAGTTAAGTGGAAGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCCAAGGCCTAGGGTAGAAAATATTACATAGTTAAGTGGAAGATGC  400

seq1  TAGAAACTCGTTGGTAAAGATGCAAGCCCACCACTTGCTAAATTCATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACTCGTTGGTAAAGATGCAAGCCCACCACTTGCTAAATTCATGAA  450

seq1  CGCTTAGATGGAGGTTTCTCAGTTAAGCATGAGAAATATCTGGAAATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTAGATGGAGGTTTCTCAGTTAAGCATGAGAAATATCTGGAAATATA  500

seq1  TTTTGCCACATAGTGACTATACCTAGCATCATACACTATTCTTGCAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCACATAGTGACTATACCTAGCATCATACACTATTCTTGCAAAGT  550

seq1  GGTAAAAATAGAAGTAAAGTATTTTTATAAACCAATTTCACTGGATAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAAATAGAAGTAAAGTATTTTTATAAACCAATTTCACTGGATAAAT  600

seq1  AATATGTACTTAGATTTATTTAGTCTCTTCAAAATACTATGGTGCATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTACTTAGATTTATTTAGTCTCTTCAAAATACTATGGTGCATTTA  650

seq1  ATCAGCATAGTTCCATCTGTCAGTTAGAAAACTAATTGAAAATTTAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCATAGTTCCATCTGTCAGTTAGAAAACTAATTGAAAATTTAATAA  700

seq1  AGGACAAGAAGAAATTAAGAAAACATGTTGCTAATGCGATTTTTGCTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAAGAAGAAATTAAGAAAACATGTTGCTAATGCGATTTTTGCTAAA  750

seq1  GAACAATCCAGTTTCAAACCTCTGATTTTATTTTAATTCCTGTCCTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATCCAGTTTCAAACCTCTGATTTTATTTTAATTCCTGTCCTTTTT  800

seq1  TATTTTTTAATTTTTT-GGAAAAAGGCTGAATTCCAGTTTACAAAACTAG  849
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TATTTTTTAATTTTTTGGGAAAAAGGCTGAATTCCAGTTTACAAAACTAG  850

seq1  GGTGCAGCCTACATAAGAAAAGAATCCAC-TTATTCTGATTCCTGATCTA  898
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGTGCAGCCTACATAAGAAAAGAATCCACTTTATTCTGATTCCTGATCTA  900

seq1  TTATTTCATGCACTTACATAATTTTCATTGTGTTACTCCCGAAGATTC-T  947
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTATTTCATGCACTTACATAATTTTCATTGTGTTACTCCCGAAGATTCTT  950

seq1  TTAACAGGATGATGAAACTGTTAGCACC-TTGAACATAATTATGGATTCC  996
      |||||||||||||||||||||||||||| |||||||||||   |||||||
seq2  TTAACAGGATGATGAAACTGTTAGCACCTTTGAACATAATATGGGATTCC  1000

seq1  AATAGTCCAGATTTTTAAAAAAGAAAAGAAA-CTGCTATACTATTTTGCC  1045
       ||||| |||||||||||||||||||||||| ||||||||||||||||||
seq2  -ATAGT-CAGATTTTTAAAAAAGAAAAGAAACCTGCTATACTATTTTGCC  1048

seq1  TAATTAAGTTATTGAAGTCATATGCTTT-GGAGTTTATTTTGGAATTTAA  1094
      ||||| ||||||   ||||||||||||| |||||||||||| ||   | |
seq2  TAATT-AGTTAT--GAGTCATATGCTTTGGGAGTTTATTTTTGA---TTA  1092

seq1  GACTTATTTCCATCATTTAAAAGTGGTATGGTAATGGAACATTGAGTTCT  1144
      |||||||||||||||||| ||||| |||||||||| ||||||||||||| 
seq2  GACTTATTTCCATCATTTCAAAGT-GTATGGTAATTGAACATTGAGTTCC  1141

seq1  TTAACA--TTTCTG--ACCCTCTATA  1166
      |||| |  ||||||  ||||||| ||
seq2  TTAATATTTTTCTGGAACCCTCTCTA  1167