BAC Information

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BAC

Clone NameB6Ng01-246M14
Chromosome12 (Build37)
Map Location 26,829,802 - 26,926,896
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042973, LOC100042974, LOC668726
Downstream geneRnf144, Rsad2, Tyki, LOC668731, 1700020D12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246M14.bB6Ng01-246M14.g
ACCGA055303GA055304
length253652
definitionB6Ng01-246M14.b B6Ng01-246M14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,926,644 - 26,926,896)(26,829,802 - 26,830,453)
sequence
tggtttattttgctgtcattaactgtgctagtactgttgtgagagtatag
cactgacccttagactcccatggctggagatgctgggcatggctgtgggg
acaccacaaatgggaggagtctggtcccttcatcaccattcactgtaaca
cagtgacaattcagtgagaccttcatgtcaggtatcttctgtctttgccc
gagtcagttgcagctggttgttttgttgtggttgttgtggttgggtgttg
ttg

gaattcacagggagatggggtgttacccaagaacatatatttatagtgta
tggtcttgcctaggggatgatctgcaatttttctgaggagtaatccactg
gcatgcatggttccatgctgtcctggtttgaatggaaacattccccaccg
agtctgtgtactggtcctgccaccaatggtgctgttttaggtcattgtag
aaactttgaggttggacttgggagggatggttgtagcctggccctgcatt
tgcccattttttactccatgcatagctggggctggagagtctgaactgct
ttgcattctcaagatggttaagcagtctccttggctccccacatttaggt
accagcagcacatctctctctctctctgtgacaatcacaaatgcctgggg
caactgccaagtcccagactgcagagagctgcccttccactgaaacacaa
atgacctccttcatctagcggttgtctctgctctggggcaacggcagaag
aaagacaacaacggaaaccatctgcccacagcagtttccacatttattca
gaactatgcagctaatgctcttaccaactcctgctttaacatccaggagg
aactcagtgctggagagcgcatgagaaggaagggaaggggggtggggaat
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_26926644_26926896
seq2: B6Ng01-246M14.b_49_301 (reverse)

seq1  CAACAACACCCAACCACAACAACCACAACAAAACAACCAGCTGCAACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACACCCAACCACAACAACCACAACAAAACAACCAGCTGCAACTGA  50

seq1  CTCGGGCAAAGACAGAAGATACCTGACATGAAGGTCTCACTGAATTGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGCAAAGACAGAAGATACCTGACATGAAGGTCTCACTGAATTGTCA  100

seq1  CTGTGTTACAGTGAATGGTGATGAAGGGACCAGACTCCTCCCATTTGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTACAGTGAATGGTGATGAAGGGACCAGACTCCTCCCATTTGTGG  150

seq1  TGTCCCCACAGCCATGCCCAGCATCTCCAGCCATGGGAGTCTAAGGGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCACAGCCATGCCCAGCATCTCCAGCCATGGGAGTCTAAGGGTCA  200

seq1  GTGCTATACTCTCACAACAGTACTAGCACAGTTAATGACAGCAAAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTATACTCTCACAACAGTACTAGCACAGTTAATGACAGCAAAATAAA  250

seq1  CCA  253
      |||
seq2  CCA  253


seq1: chr12_26829802_26830453
seq2: B6Ng01-246M14.g_68_719

seq1  GAATTCACAGGGAGATGGGGTGTTACCCAAGAACATATATTTATAGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGGGAGATGGGGTGTTACCCAAGAACATATATTTATAGTGTA  50

seq1  TGGTCTTGCCTAGGGGATGATCTGCAATTTTTCTGAGGAGTAATCCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTGCCTAGGGGATGATCTGCAATTTTTCTGAGGAGTAATCCACTG  100

seq1  GCATGCATGGTTCCATGCTGTCCTGGTTTGAATGGAAACATTCCCCACCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCATGGTTCCATGCTGTCCTGGTTTGAATGGAAACATTCCCCACCG  150

seq1  AGTCTGTGTACTGGTCCTGCCACCAATGGTGCTGTTTTAGGTCATTGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTGTACTGGTCCTGCCACCAATGGTGCTGTTTTAGGTCATTGTAG  200

seq1  AAACTTTGAGGTTGGACTTGGGAGGGATGGTTGTAGCCTGGCCCTGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTGAGGTTGGACTTGGGAGGGATGGTTGTAGCCTGGCCCTGCATT  250

seq1  TGCCCATTTTTTACTCCATGCATAGCTGGGGCTGGAGAGTCTGAACTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATTTTTTACTCCATGCATAGCTGGGGCTGGAGAGTCTGAACTGCT  300

seq1  TTGCATTCTCAAGATGGTTAAGCAGTCTCCTTGGCTCCCCACATTTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTCTCAAGATGGTTAAGCAGTCTCCTTGGCTCCCCACATTTAGGT  350

seq1  ACCAGCAGCACATCTCTCTCTCTCTCTGTGACAATCACAAATGCCTGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCAGCACATCTCTCTCTCTCTCTGTGACAATCACAAATGCCTGGGG  400

seq1  CAACTGCCAAGTCCCAGACTGCAGAGAGCTGCCCTTCCACTGAAACACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCCAAGTCCCAGACTGCAGAGAGCTGCCCTTCCACTGAAACACAA  450

seq1  ATGACCTCCTTCATCTAGCGGTTGTCTCTGCTCTGGGGCAACGGCAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTCCTTCATCTAGCGGTTGTCTCTGCTCTGGGGCAACGGCAGAAG  500

seq1  AAAGACAACAACGGAAACCATCTGCCCACAGCAGTTTCCACATTTATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAACAACGGAAACCATCTGCCCACAGCAGTTTCCACATTTATTCA  550

seq1  GAACTATGCAGCTAATGCTCTTACCAACTCCTGCTTTAACATCCAGGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATGCAGCTAATGCTCTTACCAACTCCTGCTTTAACATCCAGGAGG  600

seq1  AACTCAGTGCTGGAGAGCGCATGAGAAGGAAGGGAAGGGGGGTGGGGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGTGCTGGAGAGCGCATGAGAAGGAAGGGAAGGGGGGTGGGGAAT  650

seq1  GA  652
      ||
seq2  GA  652


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