BAC Information

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BAC

Clone NameB6Ng01-247B14
Chromosome12 (Build37)
Map Location 90,449,649 - 90,596,919
singlet/doubletdoublet
Overlap geneNrxn3
Upstream geneEG638008, EG666862, EG435337, LOC100039154, LOC633093, LOC667440, LOC100039383, EG266459, LOC667475, LOC620915, LOC435314, Adck1, LOC100039261, EG666915
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247B14.bB6Ng01-247B14.g
ACCGA055531GA055532
length1,1371,152
definitionB6Ng01-247B14.b B6Ng01-247B14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,595,782 - 90,596,919)(90,449,649 - 90,450,803)
sequence
gaattcactacatttattttaactatggccctacttagggaacacaaggg
tctagcattcattcctatgtcacatggcttgacatctgcagaatcatggc
acagttataatcacttaaaataaaggtcagcaaaacatgatcatgtccca
tactttcaccacagcaaacattccaaacaatgaaaaaaaaatcttacctg
ctttcagaaggggtacctcggggttcgtggactacctcaagcaaccagaa
ccacagcaataggcaatttcctccagaattctccagatagtagctctggt
tttgtgagcagaagtccaggtcaacctggagttcagtcccccacaatgac
taccgactccgttattctctctcattcttaaagaaataggctctaaactg
taatcttctttctcaaatatctttaaacacactcttgcccggtgaataaa
atacagagatgagctcaatttaaccaaagaccttgttgtgtgcactctgc
tatgttgggtaagtgtaatgatggagtttatcatgtgctcccttagaaag
atttggaagtcagaggcagtaagatttagaataagtgatgataaaaaaaa
atatcagcgataccaagagagacacagcatgagaactgaatatgaagaga
aactctcaacatggaggaggatggggttactgataggatggccaaaggaa
gctggccagatggcagtttcatctctgcctcatctttttctgttttcatg
ttttctctctcttaaaaatgtcacagaacccctaagaaataaccatatcc
cagaattccttgcagcagataaagtggaaatgcagagcatccattatttt
ccctaaataacttttcagagaaccaacattctgtagaagaattactagaa
atgattctggatgtgtatttagacttaactcattcaattcacgaggtctc
ctataggagaataatcacctaagactggtttcaaaacagtaacagtctgg
gcctccccactaagaaggcagtagaaccaaagctgaggcttgggatgaaa
ctttcctgactccaaaaccagctacagttgatgctattttctataaagtg
aaactctagtgaccacgggcaaagaagcagccaagaa

gaattctgtggatagaaaacaaagtttatttggagaatcaaactgtgagg
ttgcctcatgggaacagagcagcagctgtctgggaaagcaagcagacttt
atatgatagtcagcagggtgaaggtatttgaggctgctcagactaatcat
cagctagatgcccttgcccaagatagctaacccttaaggacagataaggg
tggtagtggctttcctggtaaacagaaacctaccttgtgacattcctaag
caatctgagtttaggcttcggtttagccaattacaatcctgattacccag
tcatagtccttctctgtaggtcattgtcataagcactggtgttttgggga
cctgctttggactaacaatggtggagacacaacaggtagaatctttgggg
ttcacatgccaaccagtctaaccatactttgaactccactataatcatga
gagacagtgttttgctatggctccatctgagcacagataagtttcttgtt
attcaaggtcttttgatggaaatggagcataaggtagcatatctcagact
ttcatatttgaaactcagaaaagtagtgagtctaggtgacagaagttgct
gccacccagtggtcatgcattttaagcgccctctgggttttagaactgac
ccttaacttcctaccagaaatggaggcagatttaatagttggagttcctg
tccctgtttgcatcaactcgggaatgaagaaactgaaagcctggtggcct
ggtaaatcaaactgtattgactcatgagatagcctggtatagtgaaaatc
ctttccaaattcatttgattatatcaaaagataggtatttcatgtagagg
gcatctaatactttgtaggtatgaatagatttttttttcttcaaaatatg
aggaaactctctgatcctatagaactatcatgactagttacctattgcaa
atacactgaagtcttcaatgataattgagagaaatttatgggtctagtgg
tagaaaaatatttactcttttgtagaaatgatcattgtgctaatgagaaa
atatagaatgcttcatgcttaggcacatgtccagtattttggtgaatcaa
tgttttctaaccacctgtgatacttatggcaccctgtgcaaaataagttg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_90595782_90596919
seq2: B6Ng01-247B14.b_49_1185 (reverse)

seq1  TTCTT-GCTGCTTCTTTCCCAATTGTCAACTAGAGTTTCACTTTATAGAA  49
      ||||| ||||||||||| ||  | ||| ||||||||||||||||||||||
seq2  TTCTTGGCTGCTTCTTTGCCCGTGGTC-ACTAGAGTTTCACTTTATAGAA  49

seq1  AATAGCATCACCTTGTAGCTGGGTTTTGGAGTCAGGAAAGTTTCATCCCA  99
      |||||||||| | ||||||| |||||||||||||||||||||||||||||
seq2  AATAGCATCAAC-TGTAGCT-GGTTTTGGAGTCAGGAAAGTTTCATCCCA  97

seq1  AGCCTCAGCTTTGGTTCCTACTGCCTTCTTAGT-GGGAGGCCCAGACTGT  148
      |||||||||||||||| |||||||||||||||| ||||||||||||||||
seq2  AGCCTCAGCTTTGGTT-CTACTGCCTTCTTAGTGGGGAGGCCCAGACTGT  146

seq1  TACTGTTTTG-AACCAGTCTTAGGTGATTATTCTCCTATAGGAGACCTCG  197
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTTTGAAACCAGTCTTAGGTGATTATTCTCCTATAGGAGACCTCG  196

seq1  TGAATTGAATGAGTTAAGTCTAAATACACATCCAGAATCATTTCTAGTAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGAATGAGTTAAGTCTAAATACACATCCAGAATCATTTCTAGTAA  246

seq1  TTCTTCTACAGAATGTTGGTTCTCTGAAAAGTTATTTAGGGAAAATAATG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTACAGAATGTTGGTTCTCTGAAAAGTTATTTAGGGAAAATAATG  296

seq1  GATGCTCTGCATTTCCACTTTATCTGCTGCAAGGAATTCTGGGATATGGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTCTGCATTTCCACTTTATCTGCTGCAAGGAATTCTGGGATATGGT  346

seq1  TATTTCTTAGGGGTTCTGTGACATTTTTAAGAGAGAGAAAACATGAAAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTAGGGGTTCTGTGACATTTTTAAGAGAGAGAAAACATGAAAAC  396

seq1  AGAAAAAGATGAGGCAGAGATGAAACTGCCATCTGGCCAGCTTCCTTTGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGATGAGGCAGAGATGAAACTGCCATCTGGCCAGCTTCCTTTGG  446

seq1  CCATCCTATCAGTAACCCCATCCTCCTCCATGTTGAGAGTTTCTCTTCAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTATCAGTAACCCCATCCTCCTCCATGTTGAGAGTTTCTCTTCAT  496

seq1  ATTCAGTTCTCATGCTGTGTCTCTCTTGGTATCGCTGATATTTTTTTTTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTTCTCATGCTGTGTCTCTCTTGGTATCGCTGATATTTTTTTTTA  546

seq1  TCATCACTTATTCTAAATCTTACTGCCTCTGACTTCCAAATCTTTCTAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACTTATTCTAAATCTTACTGCCTCTGACTTCCAAATCTTTCTAAG  596

seq1  GGAGCACATGATAAACTCCATCATTACACTTACCCAACATAGCAGAGTGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCACATGATAAACTCCATCATTACACTTACCCAACATAGCAGAGTGC  646

seq1  ACACAACAAGGTCTTTGGTTAAATTGAGCTCATCTCTGTATTTTATTCAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACAAGGTCTTTGGTTAAATTGAGCTCATCTCTGTATTTTATTCAC  696

seq1  CGGGCAAGAGTGTGTTTAAAGATATTTGAGAAAGAAGATTACAGTTTAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCAAGAGTGTGTTTAAAGATATTTGAGAAAGAAGATTACAGTTTAGA  746

seq1  GCCTATTTCTTTAAGAATGAGAGAGAATAACGGAGTCGGTAGTCATTGTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATTTCTTTAAGAATGAGAGAGAATAACGGAGTCGGTAGTCATTGTG  796

seq1  GGGGACTGAACTCCAGGTTGACCTGGACTTCTGCTCACAAAACCAGAGCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTGAACTCCAGGTTGACCTGGACTTCTGCTCACAAAACCAGAGCT  846

seq1  ACTATCTGGAGAATTCTGGAGGAAATTGCCTATTGCTGTGGTTCTGGTTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTGGAGAATTCTGGAGGAAATTGCCTATTGCTGTGGTTCTGGTTG  896

seq1  CTTGAGGTAGTCCACGAACCCCGAGGTACCCCTTCTGAAAGCAGGTAAGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGTAGTCCACGAACCCCGAGGTACCCCTTCTGAAAGCAGGTAAGA  946

seq1  TTTTTTTTTCATTGTTTGGAATGTTTGCTGTGGTGAAAGTATGGGACATG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCATTGTTTGGAATGTTTGCTGTGGTGAAAGTATGGGACATG  996

seq1  ATCATGTTTTGCTGACCTTTATTTTAAGTGATTATAACTGTGCCATGATT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTTTTGCTGACCTTTATTTTAAGTGATTATAACTGTGCCATGATT  1046

seq1  CTGCAGATGTCAAGCCATGTGACATAGGAATGAATGCTAGACCCTTGTGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGATGTCAAGCCATGTGACATAGGAATGAATGCTAGACCCTTGTGT  1096

seq1  TCCCTAAGTAGGGCCATAGTTAAAATAAATGTAGTGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAAGTAGGGCCATAGTTAAAATAAATGTAGTGAATTC  1137


seq1: chr12_90449649_90450803
seq2: B6Ng01-247B14.g_68_1219

seq1  GAATTCTGTGGATAGAAAACAAAGTTTATTTGGAGAATCAAACTGTGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGGATAGAAAACAAAGTTTATTTGGAGAATCAAACTGTGAGG  50

seq1  TTGCCTCATGGGAACAGAGCAGCAGCTGTCTGGGAAAGCAAGCAGACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCATGGGAACAGAGCAGCAGCTGTCTGGGAAAGCAAGCAGACTTT  100

seq1  ATATGATAGTCAGCAGGGTGAAGGTATTTGAGGCTGCTCAGACTAATCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATAGTCAGCAGGGTGAAGGTATTTGAGGCTGCTCAGACTAATCAT  150

seq1  CAGCTAGATGCCCTTGCCCAAGATAGCTAACCCTTAAGGACAGATAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGATGCCCTTGCCCAAGATAGCTAACCCTTAAGGACAGATAAGGG  200

seq1  TGGTAGTGGCTTTCCTGGTAAACAGAAACCTACCTTGTGACATTCCTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGTGGCTTTCCTGGTAAACAGAAACCTACCTTGTGACATTCCTAAG  250

seq1  CAATCTGAGTTTAGGCTTCGGTTTAGCCAATTACAATCCTGATTACCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTGAGTTTAGGCTTCGGTTTAGCCAATTACAATCCTGATTACCCAG  300

seq1  TCATAGTCCTTCTCTGTAGGTCATTGTCATAAGCACTGGTGTTTTGGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTCCTTCTCTGTAGGTCATTGTCATAAGCACTGGTGTTTTGGGGA  350

seq1  CCTGCTTTGGACTAACAATGGTGGAGACACAACAGGTAGAATCTTTGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTTTGGACTAACAATGGTGGAGACACAACAGGTAGAATCTTTGGGG  400

seq1  TTCACATGCCAACCAGTCTAACCATACTTTGAACTCCACTATAATCATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATGCCAACCAGTCTAACCATACTTTGAACTCCACTATAATCATGA  450

seq1  GAGACAGTGTTTTGCTATGGCTCCATCTGAGCACAGATAAGTTTCTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGTGTTTTGCTATGGCTCCATCTGAGCACAGATAAGTTTCTTGTT  500

seq1  ATTCAAGGTCTTTTGATGGAAATGGAGCATAAGGTAGCATATCTCAGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGGTCTTTTGATGGAAATGGAGCATAAGGTAGCATATCTCAGACT  550

seq1  TTCATATTTGAAACTCAGAAAAGTAGTGAGTCTAGGTGACAGAAGTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTTGAAACTCAGAAAAGTAGTGAGTCTAGGTGACAGAAGTTGCT  600

seq1  GCCACCCAGTGGTCATGCATTTTAAGCGCCCTCTGGGTTTTAGAACTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCCAGTGGTCATGCATTTTAAGCGCCCTCTGGGTTTTAGAACTGAC  650

seq1  CCTTAACTTCCTACCAGAAATGGAGGCAGATTTAATAGTTGGAGTTCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAACTTCCTACCAGAAATGGAGGCAGATTTAATAGTTGGAGTTCCTG  700

seq1  TCCCTGTTTGCATCAACTCGGGAATGAAGAAACTGAAAGCCTGGTGGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTTTGCATCAACTCGGGAATGAAGAAACTGAAAGCCTGGTGGCCT  750

seq1  GGTAAATCAAACTGTATTGACTCATGAGATAGCCTGGTATAGTGAAAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATCAAACTGTATTGACTCATGAGATAGCCTGGTATAGTGAAAATC  800

seq1  CTTTCCAAATTCATTTGATTATATCAAAAGATAGGTATTTCATGTAGAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAAATTCATTTGATTATATCAAAAGATAGGTATTTCATGTAGAGG  850

seq1  GCATCTAATACTTTGTAGGTATGAATAGA-TTTTTTTTCTTCAAAAATAT  899
      ||||||||||||||||||||||||||||| |||||||||||| |||||||
seq2  GCATCTAATACTTTGTAGGTATGAATAGATTTTTTTTTCTTC-AAAATAT  899

seq1  GAGGAAACTCTCTGATCCTATAGAACTATCATGACTAGTTACCTATTGCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAACTCTCTGATCCTATAGAACTATCATGACTAGTTACCTATTGCA  949

seq1  AATACACTGAAGTCTTCAATGATAATTGAGAGAAATTTAT-GGTCTAGGT  998
      |||||||||||||||||||||||||||||||||||||||| |||||| ||
seq2  AATACACTGAAGTCTTCAATGATAATTGAGAGAAATTTATGGGTCTA-GT  998

seq1  GGTAAGAAAATAATTACTC-TTTGTAGAAATGAATCATTGGTGCTAATGA  1047
      ||||  |||||| |||||| |||||||||||| |||||| ||||||||||
seq2  GGTAGAAAAATATTTACTCTTTTGTAGAAATG-ATCATT-GTGCTAATGA  1046

seq1  AGAAATATAGAATGCTTCATGCTTAGGGCACATGTCCAGGTAATTTTGGT  1097
        ||||||||||||||||||||||| |||||||||||||   ||||||||
seq2  GAAAATATAGAATGCTTCATGCTTA-GGCACATGTCCAG--TATTTTGGT  1093

seq1  G-ATCAATGTTTCTTAACACACTGTGATTACTTAT-GCA-CCTGTGGCAA  1144
      | ||||||||||  ||||   |||||| ||||||| ||| ||||| ||||
seq2  GAATCAATGTTTTCTAACCACCTGTGA-TACTTATGGCACCCTGT-GCAA  1141

seq1  AATAAGTTGTG  1155
      |||||||||||
seq2  AATAAGTTGTG  1152


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