BAC Information

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BAC

Clone NameB6Ng01-250B17
Chromosome12 (Build37)
Map Location 22,825,064 - 22,826,186
singlet/doubletsinglet
Overlap geneEG668662
Upstream gene6030426L16Rik, LOC434693, EG668645, EG668646, LOC100043416, LOC668650, EG668496, LOC668653, EG432637, LOC668656, EG629133, EG668660
Downstream geneLOC668664, 2410018L13Rik, LOC77114, EG668669, EG668670, LOC668680, LOC100042895, LOC100043435
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250B17.bB6Ng01-250B17.g
ACCGA057743GA057744
length1,2271,129
definitionB6Ng01-250B17.b B6Ng01-250B17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg
tgactctaaggaagtgaaagatctgtatgataaaaacttcaaatctctga
agaaagaaattaaagaagatctcagaagatggaaagatctcccatgctca
tggattggcaggatcaacattgtaaaaatggctatcttgccaaaagcaat
ctacagattcaatgcaatccccatcaaaattccaactcaattcttcaacg
aattggaaggagcaatttgcaaattcgtctggaataacaaaaaacctagg
atagcaaaaagtcttctcaaggataaaagaacttctggtggaatcaccat
gccagacctaaagctttactacagagcaattgtgataaaaactgcatggt
actggtatagagacagacaagtagaccaatggaatagaattgaagaccca
gaaatgaacccacacacctatggtcacttgatcttcgacaagggagctaa
aaccatccagtggaagaaagacagcattttcaacaattgggtgctggcac
aactggttgttatcgtgtagaagaattcgaatcaatccacacttatctcc
ttgtactaaggtcaaatctaagtggatcaaggaactcataataaaaccag
aagaacactgaaacttatagagagaaagtgggggaaaagctgaagaatat
tggacacagggaaaatctgaacaagaaacagcatggctgtgcctgtaaga
atcagaaattgacatgacctaatgaaactcaaggttctggcaagcaaagg
aacacacgggtcatatatagcgagtag
gaattcctagtgtctgatgccctgtggggggctttctttgtgaaaagctt
acacattgttttcctgaggctttttgatttgcttggaaaactaactctag
cagcctgagggttgggcataatccccccagacagcagtggggagccaggc
actttgcctccaaactttcccttttctgttagtgcttaaaaaacagggtt
acattctggttctgtttgttccagtactcctctcctctctctcctgacct
ctcccactcagcttgggcttcacagccaatgctgatctcactggctgact
ctgcattgcattttggtgagtcccacttactagtgccaagaagtaaacgc
agaagcagctagctcctgtcctggtcaaagtttcctaggggctcccagcc
tccccagggtcatgccctgaaccctcccctgagtagaacccctgagtgtg
gcaaagaaggcccctgcatgggccagacctgtagaaatgtctggttaggc
aggctctctgggtccctctgagtaattagctggagacgggagtccagaaa
ggacgagagcaagggatttgacagcagggttgccagctgatcaatgtggt
ctttgttccttgttccaaaaaagatgacacagtgatctagcctggagctt
ttaggaacaagcagcatccctggaagatgctgctcactactgtgaagcag
gaagagcactgatgggaagcaggagtaacctccatccttcatgtctcagg
ggactcatagcccatataagcaggctgctcacttgtctgaagtctgatcc
tacagatcctgtcctggctagttttatgtcaacttaacacaagctagagt
catctgagaggagaaatctagatttagaaaaatgctttccataagatcca
gctgtaaaggcattttcttaatgaagaaattaaaggcaatttcataatta
gatatggggagggcccagccaattgaggtgctgtcatctctgggctggtg
gttcctgggtctataagaaaagcaggctgagcaagcccaggaggagcaaa
ccataactagccactcctctcttcatgaactctgccatcagctcctgcct
ccaggttctgcccttgctcaagtcctgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_22825064_22826186
seq2: B6Ng01-250B17.g_66_1194 (reverse)

seq1  AACAGGAACTTGAGC-AGGGCAGAAACCTGGAGGCAGGAGCTGAT-GCAG  48
      |||||| |||||||| ||||||| ||||||||||||||||||||| ||||
seq2  AACAGG-ACTTGAGCAAGGGCAG-AACCTGGAGGCAGGAGCTGATGGCAG  48

seq1  AGTTCATGAAGGAGA-GAGT-GCTAGTTATTGGTTTGCTCCTCCT-GGCT  95
      |||||||||| |||| |||| |||||||| ||||||||||||||| ||||
seq2  AGTTCATGAA-GAGAGGAGTGGCTAGTTA-TGGTTTGCTCCTCCTGGGCT  96

seq1  TGCTCAGCCTGC-TTTCTTATAGACCCAGG-ACCACCAGCCCAGAGATGA  143
      |||||||||||| ||||||||||||||||| |||||||||||||||||||
seq2  TGCTCAGCCTGCTTTTCTTATAGACCCAGGAACCACCAGCCCAGAGATGA  146

seq1  CAGCACCCTCAATTGGCTGGGCCCT-CCCATATCTAATTATGAAATTGCC  192
      ||||| ||||||||||||||||||| ||||||||||||||||||||||||
seq2  CAGCA-CCTCAATTGGCTGGGCCCTCCCCATATCTAATTATGAAATTGCC  195

seq1  -TTAATTTCTTCATTAAGAAAATGCC-TTACAGCTGGATCTTATGG-AAG  239
       ||||||||||||||||||||||||| ||||||||||||||||||| |||
seq2  TTTAATTTCTTCATTAAGAAAATGCCTTTACAGCTGGATCTTATGGAAAG  245

seq1  CATTTTTCTAAATCTAGATTTCTCCTCTCAGATGACTCTAGCTTGTGTTA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCTAAATCTAGATTTCTCCTCTCAGATGACTCTAGCTTGTGTTA  295

seq1  AGTTGACATAAAACTAGCCAGGACAGGATCTGTAGGATCAGACTTCAGAC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGACATAAAACTAGCCAGGACAGGATCTGTAGGATCAGACTTCAGAC  345

seq1  AAGTGAGCAGCCTGCTTATATGGGCTATGAGTCCCCTGAGACATGAAGGA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGCAGCCTGCTTATATGGGCTATGAGTCCCCTGAGACATGAAGGA  395

seq1  TGGAGGTTACTCCTGCTTCCCATCAGTGCTCTTCCTGCTTCACAGTAGTG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTTACTCCTGCTTCCCATCAGTGCTCTTCCTGCTTCACAGTAGTG  445

seq1  AGCAGCATCTTCCAGGGATGCTGCTTGTTCCTAAAAGCTCCAGGCTAGAT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCATCTTCCAGGGATGCTGCTTGTTCCTAAAAGCTCCAGGCTAGAT  495

seq1  CACTGTGTCATCTTTTTTGGAACAAGGAACAAAGACCACATTGATCAGCT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGTCATCTTTTTTGGAACAAGGAACAAAGACCACATTGATCAGCT  545

seq1  GGCAACCCTGCTGTCAAATCCCTTGCTCTCGTCCTTTCTGGACTCCCGTC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACCCTGCTGTCAAATCCCTTGCTCTCGTCCTTTCTGGACTCCCGTC  595

seq1  TCCAGCTAATTACTCAGAGGGACCCAGAGAGCCTGCCTAACCAGACATTT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTAATTACTCAGAGGGACCCAGAGAGCCTGCCTAACCAGACATTT  645

seq1  CTACAGGTCTGGCCCATGCAGGGGCCTTCTTTGCCACACTCAGGGGTTCT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGGTCTGGCCCATGCAGGGGCCTTCTTTGCCACACTCAGGGGTTCT  695

seq1  ACTCAGGGGAGGGTTCAGGGCATGACCCTGGGGAGGCTGGGAGCCCCTAG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGGGAGGGTTCAGGGCATGACCCTGGGGAGGCTGGGAGCCCCTAG  745

seq1  GAAACTTTGACCAGGACAGGAGCTAGCTGCTTCTGCGTTTACTTCTTGGC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTTGACCAGGACAGGAGCTAGCTGCTTCTGCGTTTACTTCTTGGC  795

seq1  ACTAGTAAGTGGGACTCACCAAAATGCAATGCAGAGTCAGCCAGTGAGAT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTAAGTGGGACTCACCAAAATGCAATGCAGAGTCAGCCAGTGAGAT  845

seq1  CAGCATTGGCTGTGAAGCCCAAGCTGAGTGGGAGAGGTCAGGAGAGAGAG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTGGCTGTGAAGCCCAAGCTGAGTGGGAGAGGTCAGGAGAGAGAG  895

seq1  GAGAGGAGTACTGGAACAAACAGAACCAGAATGTAACCCTGTTTTTTAAG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGTACTGGAACAAACAGAACCAGAATGTAACCCTGTTTTTTAAG  945

seq1  CACTAACAGAAAAGGGAAAGTTTGGAGGCAAAGTGCCTGGCTCCCCACTG  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAACAGAAAAGGGAAAGTTTGGAGGCAAAGTGCCTGGCTCCCCACTG  995

seq1  CTGTCTGGGGGGATTATGCCCAACCCTCAGGCTGCTAGAGTTAGTTTTCC  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGGGGGGATTATGCCCAACCCTCAGGCTGCTAGAGTTAGTTTTCC  1045

seq1  AAGCAAATCAAAAAGCCTCAGGAAAACAATGTGTAAGCTTTTCACAAAGA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAATCAAAAAGCCTCAGGAAAACAATGTGTAAGCTTTTCACAAAGA  1095

seq1  AAGCCCCCCACAGGGCATCAGACACTAGGAATTC  1123
      ||||||||||||||||||||||||||||||||||
seq2  AAGCCCCCCACAGGGCATCAGACACTAGGAATTC  1129