BAC Information

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BAC

Clone NameB6Ng01-258M13
Chromosome12 (Build37)
Map Location 64,799,666 - 64,799,817
singlet/doubletsinglet
Overlap genenone
Upstream geneTspyl-ps, EG665741, EG382606
Downstream geneLOC435302, EG623046
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258M13.bB6Ng01-258M13.g
ACCGA064132GA064133
length1,039984
definitionB6Ng01-258M13.b B6Ng01-258M13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaagtgaggaacaccaaatgactgaaaagcaccaaaaaaaaaa
aaaaaaaaaaaagttcaacattcttagttatcagggaaatgcaaatcaaa
acaaccctgagattccacctcacaccaatcagaatgactaagatcaaaaa
cttaggtaaaaccagatgctggcaaggatgtgaagaaagaggaatactcc
tccattgctggtgggattgcaagctggtacaaccactctggaagtcagtc
tggaggttcctcagaaaaattgacataggacccagaaataccactactgg
gtatatacccagaagatgttccaactggtaataaggacacatgctccacc
atgttcatagcagccttatttataatagccagaagctggaaagaacccag
atgtccctcaacagaggaatggatacagaaaatgtggtatagttacacaa
tggagtactactcaggtattaaaaacaatgaatttatgaaattcttaggc
aaatggatggaactagaaaatatcatcctgagtgaggcaacctaatcacc
aaagaacacacatgatatgcactcagtgatacgtggatattagcccagaa
gcttagaatacccaagatacaattcacaaaccacatgaaactgaagaagg
aagacaaaaatgtgaatactttgatccttcttagaagggggagcaaaata
cccaatagaaggaattacagagacaaactgtggagcagagactgaaggaa
tgaccatccagagactgccccacctggggatccatcccatatacagttac
caaacccagacactattgcggatgccaacaagtgcttgctgacagaagcc
tgatacatctgtctcctgagaggttttgccagtgcctgacaaatacagaa
gtgaatgctcacagccatccattgaattgagcagagggtccacaatgaag
gagctagagaaggacccaaggggctgaaggggtttgcagccccataggag
aacaacatatgaactaatcagtaccccagagctccaagg
gaattcatgaaattcgcaggcaaatggatggaaatagaaaatatcatcct
gagtgaggtaacccaatcacaaaagaacacacatgatatgcactcattga
taagtggatattagcgaagaagattgaaatacccataatacaagctcagg
aagaaggaagaccaaagtgtggatactttggtccttcttagaagggggaa
caaaatacccatggaaggagttacagagacgaagtattgaatagagtctg
aaagaaggaccatccagggactgctccacctggggatccatcccatatac
agtcaccaaacccagacactattgtggatgccaataagtgcttgatgaca
gaagcctgatatagctgtctcctgagaggctctaccagtgcctgacaaat
acagaggtggatgctcacagccatccattggactgagcacagggtcccca
atagacaagctagagaaatgaccgaaggagctgaaggggttagcagttgc
ataggaggaacaacaataggaactaaccagtactctcagagctcccaggg
actaaaccactaatcagagatatggagggactcatggtccagctgcatat
gtaacagaggatggccttgttgggcatcaatggaaggagaggccctttgt
cttgtgaaggctctgtgccccaatgtaggggaatgccaggaccaggaagc
agaggtgggtgctttggtgagcaggggaaggggattgggggttttcagag
gggaacccaggaaaggggataacatttgaaatgtaaataaagaaaatatc
taataattattttaaagtacatgcttacagtgtctgaaaaggcttcattg
ggactcttaaagatccttcctcctcccagtcaacctccccagaaagtata
ttttagcacatggacttttagaagattatttaaaattcaggcacaacaga
caggagcacagtaaacggagagctctggatcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_64799666_64799817
seq2: B6Ng01-258M13.g_111_439 (reverse)

seq1  --------------------------------------------------  0
                                                        
seq2  GAGACAGCTATATCAGGCTTCTGTCATCAAGCACTTATTGGCATCCACAA  50

seq1  --------------------------------------------------  0
                                                        
seq2  TAGTGTCTGGGTTTGGTGACTGTATATGGGATGGATCCCCAGGTGGAGCA  100

seq1  -----------------------------------------------GAG  3
                                                     |  
seq2  GTCCCTGGATGGTCCTTCTTTCAGACTCTATTCAATACTTCGTCTCTGTA  150

seq1  ACAGCT-------ATATCATGGT---CCTTGCAACAAACGCTTACTAGTG  43
      ||  ||        |||  || |   ||||  || ||      || |  |
seq2  ACTCCTTCCATGGGTATTTTGTTCCCCCTTCTAAGAA----GGACCAAAG  196

seq1  TATGCA----ATGGTGTCAGTGTTT--GGAGGCTG-ATTATGG-------  79
      ||| ||     |||| |   |  ||   |||  || |||||||       
seq2  TATCCACACTTTGGTCTTCCTTCTTCCTGAGCTTGTATTATGGGTATTTC  246

seq1  ----------GCTAATATCCACTTATCAGTGAGTACATATCATTTGACTT  119
                |||||||||||||||||| ||||| |||||||| ||  ||
seq2  AATCTTCTTCGCTAATATCCACTTATCAATGAGTGCATATCATGTGTGTT  296

seq1  CTTTTGTGATTGTGTTACCTCACTCAGGATGAT  152
      |||||||||||| ||||||||||||||||||||
seq2  CTTTTGTGATTGGGTTACCTCACTCAGGATGAT  329