BAC Information

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BAC

Clone NameB6Ng01-258P22
Chromosome12 (Build37)
Map Location 38,809,675 - 38,810,791
singlet/doubletsinglet
Overlap geneDgkb
Upstream geneMeox2, A530016O06Rik, LOC100043139
Downstream geneLOC668824, LOC100043142, Etv1, LOC100043145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258P22.bB6Ng01-258P22.g
ACCGA064292GA064293
length1,1351,200
definitionB6Ng01-258P22.b B6Ng01-258P22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcaagaacatcctttaatttctttgtagaatctacaacaacaa
gaaaagagaaagagagaaaacacacaaaccatttatatagtcctgatatg
tttatgtactccagttcaaacaaaaatacaacatgtaaataatcacaaag
agaagtcaagttttaaatcaacacataaaatgctttttgagagagtcagg
aagctgatgagtaaacccaagttcttgtacaaatgagataagcattctac
cactgcagtacatccccagaaaacaaagtctacttagtcataaaagataa
cggcaaagtagtgaaagcaactatatgtatgtatgtgtgtgtgtatgtat
atacacacgcacacacacacacacacacacacacacacacacacacacac
acacattggccaagtatatattttaggattcaggtcacagtctctctatt
ataatagttagtggcaaataaatgagatttttctttttcttttttgcttt
agtttgattgtgtcaaatctaactgaatacaataaatgtaacttaaaaag
ctaaagagagtatcatcatgccttgttaaagtacagcctgctcttctcat
atccatatcactgttgtaggttgtttgagtacaatattctttaaaaacca
tgtaactacagtctgtccacattatattttttatcagcaaaattttactt
tttgattttttcctgagtttgggggtaaacctaaacaatgctgcttttga
acaatcaaacgggtcagtttttgtgtgagcaaacacaaccatttgggacc
tttcatattgagttagttgataggtatcactgtataaaaattaattttca
gaagcttattaaataatacatttaaaattttcaactaaacaatttctttc
ataagattatatccctctgatcaagcatttcaaattgattaattcacttt
aggttggagaaatatatggaagacaatggaaaatccattataaatgttcc
agaaattcaagagcatatagttaataccctgtctctaaccataatgtata
tggaggaatgagtggcctccttaccacataaaaagtctctataaaccagg
tacttagtcaggcggggctgcacatgctttaatct
gaattctcataacaaggtcatggtggtttgtggtctttgtcagaattcag
tgtggggccaggggcaggagaattgctaatcttgttatggttatttctct
gagaacagctattattttggtagctacaggcttaatcattttgaccacta
aaatgatgtttttacatttgtttagtcagccagcttccttatctggctct
gcacttggcctgctagtacagtttggaaagtccgtttcgagggggaaggt
actgggtggtcttgaattcattttggatattacaaggccatgaaaggcca
ttcgtgaaggtacagccttagttgtagttgacagcccaggactaaggggt
catgcaaaggatttgaggcttggcatcatgaagagagcctatgagaggcc
attgatgaagcctagttgcagctaaagacccccctgtattggagatgttg
gtaccattggatgatgatcaagaacagcagtggcagtggagtggatcaac
ctggccttagagtgccattgagggcacagttggagaagtgatgcaaaccc
tttggagaagcacagaagatcatgtgtggatcccagacattgaaacaaga
agttgcaacatcgagtctgccttgaagaccttaagattttagagatgcca
gagccgtgggatatctactaggaaagctgctaacagggagtgtgaacagt
tcaggaaagaagtttgttgcagtcactgaagatgaaaaaggagttggaga
tcttaaaactactttgacattatacatggagattcagcgtttaatttgcc
cagctggtttcctttctttatttaggggttacagttaagtgattggatgg
atctctgaagagatttttgactatagggacttggaagtttggacgaaatg
tactttttaattatgttatgactacatatggcccccatagtccttgaaca
agcctatgggggcccagggagtagatgccatggatttgatatgcttgctt
cagggagtgcacacttgaagtgtggcctcatgttataaatgtgtcaatgt
gggccatggtttttcttctaggtcttcaatagaaggcccttcagatggag
attaggcattcttcaagttcctggccctacccatggcctgcctagatgcg
tcatgatagatataatgatcgtgaactctcgtagaacctcgtggtaaggc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_38809675_38810791
seq2: B6Ng01-258P22.b_46_1180 (reverse)

seq1  AGATTAAAGGCATGTACAGCCCCCGCCTGACTAAGTA-CTTGTTTAT-GA  48
      |||||||| |||||| ||| ||||||||||||||||| || |||||| ||
seq2  AGATTAAA-GCATGTGCAG-CCCCGCCTGACTAAGTACCTGGTTTATAGA  48

seq1  GACTTCTTATGTGGTAGGGAGG-CACTCATTCCT-CATATACATTTATGT  96
      ||||| |||||||||| ||||| ||||||||||| |||||||||   | |
seq2  GACTTTTTATGTGGTAAGGAGGCCACTCATTCCTCCATATACAT---TAT  95

seq1  GTTTAGAGACAGGGTATT-ACTATATGGCTCTTGATGTCTTGGAACATTT  145
      | |||||||||||||||| ||||||| ||||||||  |  ||||||||||
seq2  GGTTAGAGACAGGGTATTAACTATAT-GCTCTTGAATTTCTGGAACATTT  144

seq1  AT-ATGGATTTT-CATTGTCTTCCATTATATTTCTCCAA-CTAAAGTGAA  192
      || ||||||||| |||||||||||| ||||||||||||| ||||||||||
seq2  ATAATGGATTTTCCATTGTCTTCCA-TATATTTCTCCAACCTAAAGTGAA  193

seq1  -TAATCAATTTGAAATGCTTTGATCAGA-GGATATAATCTTATGAAAG-A  239
       ||||||||||||||||| ||||||||| ||||||||||||||||||| |
seq2  TTAATCAATTTGAAATGC-TTGATCAGAGGGATATAATCTTATGAAAGAA  242

seq1  ATTGTTTAGTTGAAA--TTTTAATGTATTATTT-ATAAGCTTCTGAAA--  284
      |||||||||||||||  ||| |||||||||||| ||||||||||||||  
seq2  ATTGTTTAGTTGAAAATTTTAAATGTATTATTTAATAAGCTTCTGAAAAT  292

seq1  TTATTTTTATACAGTGATACCTATC-ACT-ACTCAATATGAAAGGTCCC-  331
      | ||||||||||||||||||||||| ||| ||||||||||||||||||| 
seq2  TAATTTTTATACAGTGATACCTATCAACTAACTCAATATGAAAGGTCCCA  342

seq1  AATGGTTGTGTTTGCTCACACAAAAACTGACCCGTTTGATTGTTC-AAAG  380
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AATGGTTGTGTTTGCTCACACAAAAACTGACCCGTTTGATTGTTCAAAAG  392

seq1  CAGCATTGTTTAGGTT--ACCCCAAACTCAGGAAAAAATC-AAAAGTAAA  427
      ||||||||||||||||   ||||||||||||||||||||| |||||||||
seq2  CAGCATTGTTTAGGTTTACCCCCAAACTCAGGAAAAAATCAAAAAGTAAA  442

seq1  --TTTGCTGAT-AAAAATATAATGTGGACAGACTGTAGTTACATGGTTTT  474
        ||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCTGATAAAAAATATAATGTGGACAGACTGTAGTTACATGGTTTT  492

seq1  TAAAGAATATTGTACTCAAACAACCTACAACAGTGATATGGATATGAGAA  524
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATATTGTACTCAAACAACCTACAACAGTGATATGGATATGAGAA  542

seq1  GAGCAGGCTGTACTTTAACAAGGCATGATGATACTCTCTTTAGCTTTTTA  574
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGCTGTACTTTAACAAGGCATGATGATACTCTCTTTAGCTTTTTA  592

seq1  AGTTACATTTATTGTATTCAGTTAGATTTGACACAATCAAACTAAAGCAA  624
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACATTTATTGTATTCAGTTAGATTTGACACAATCAAACTAAAGCAA  642

seq1  AAAAGAAAAAGAAAAATCTCATTTATTTGCCACTAACTATTATAATAGAG  674
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAAGAAAAATCTCATTTATTTGCCACTAACTATTATAATAGAG  692

seq1  AGACTGTGACCTGAATCCTAAAATATATACTTGGCCAATGTGTGTGTGTG  724
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTGACCTGAATCCTAAAATATATACTTGGCCAATGTGTGTGTGTG  742

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTATATACATA  774
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTATATACATA  792

seq1  CACACACACATACATACATATAGTTGCTTTCACTACTTTGCCGTTATCTT  824
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACATACATACATATAGTTGCTTTCACTACTTTGCCGTTATCTT  842

seq1  TTATGACTAAGTAGACTTTGTTTTCTGGGGATGTACTGCAGTGGTAGAAT  874
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACTAAGTAGACTTTGTTTTCTGGGGATGTACTGCAGTGGTAGAAT  892

seq1  GCTTATCTCATTTGTACAAGAACTTGGGTTTACTCATCAGCTTCCTGACT  924
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATCTCATTTGTACAAGAACTTGGGTTTACTCATCAGCTTCCTGACT  942

seq1  CTCTCAAAAAGCATTTTATGTGTTGATTTAAAACTTGACTTCTCTTTGTG  974
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAAAAAGCATTTTATGTGTTGATTTAAAACTTGACTTCTCTTTGTG  992

seq1  ATTATTTACATGTTGTATTTTTGTTTGAACTGGAGTACATAAACATATCA  1024
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTACATGTTGTATTTTTGTTTGAACTGGAGTACATAAACATATCA  1042

seq1  GGACTATATAAATGGTTTGTGTGTTTTCTCTCTTTCTCTTTTCTTGTTGT  1074
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTATATAAATGGTTTGTGTGTTTTCTCTCTTTCTCTTTTCTTGTTGT  1092

seq1  TGTAGATTCTACAAAGAAATTAAAGGATGTTCTTGAAGAATTC  1117
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATTCTACAAAGAAATTAAAGGATGTTCTTGAAGAATTC  1135