BAC Information

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BAC

Clone NameB6Ng01-265A05
Chromosome12 (Build37)
Map Location 63,731,103 - 63,732,105
singlet/doubletsinglet
Overlap genenone
Upstream geneLrfn5, LOC665707, LOC100040403, LOC665713, LOC622746, LOC100040438
Downstream gene1700047L15Rik, Tspyl-ps, EG665741, EG382606
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265A05.bB6Ng01-265A05.g
ACCGA068772GA068773
length1,0021,164
definitionB6Ng01-265A05.b B6Ng01-265A05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattcctacccaattacaatgatcatgtataaatctagaatgaa
gctgtgacacagctattttcatggaagcaaagctcttttacagactgcag
aagaattttctcaatagcagcttttgtggctatttttgttaaagataaaa
catgaagtaacaattagagtttgagataagatattgatgtatttatataa
ttataacttaatggctataaaataattttgcctcttttagaagacttttt
tcgatgcaatcttcagtaagctattgaaagttaagaaatactgtcttagc
caggcacggttgtgcacgcctttaatcccagcacttgggaggcagaggca
ggcgaatttctgagtttgaggccatcccggactagagtgagttccaggac
agccaggactacacagagaaaccctgtctcaaaaaaacaaacaaacaaac
aaaaaacacaaaaaaacccaaacaaacaaaaaaccaccaccaccaacaaa
accaaacaaaaaacccaaaaaccaccaccaacaacaaaaccaaacaaaaa
aacccaaaaaccaaaaacaacaacaacaacaacaacaacaacaaaaacaa
acaaaaaagaaatacagtctgtgtttcctcatcagtcttcataagtgaag
actgaaattatatttagtaaatgaaatcacacaacatcccttaaatccac
ccatatgcactcagtaatagaaataagaacaatagaaaacaaatgtcaca
tctcagttatttataaaggttatattaaaactgtataaacaagtaataga
ttaatgttcgcaagaggcaggagatggtataaaatgataaagagcaaaat
atgtcaagcttataaggtgactgagttctggttacctgttttacactctg
aatggttgctgaacattgctacgaagtagcttcactacccctttccttca
aacaaataaatgaaatgatgagagagagggagagagagagagggagagag
ag

gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagcc
ctgcgcagagaggcagtgcgcagactcattcattcccagagaggaacaaa
ggaaaatacaacaggcatttccagtctttgaaggagccgagggtgggcgt
gtccacgctccggtagaatacttacaaattaaagaaattgccgagtcggt
ccgtaaatacggaaccaatgctaattttaccttggtgcagttagacaggc
ttgccggcatggcactaactcctgccgactggcaaacggttgtaaaagcc
gctctccctagtatgggcaaatatatggaatggagagcgctttggcacga
agctgcacaagcgcaggcccgagcaaacgcagctgctttgactccagagc
agagagattggacttttgacttgttaacgggtcagggagcttattctgct
gatcagacaaactaccattggggagcttatgcccagatttcttccacggc
tattagggcctggaaggcgctctcccaagcaggtgaaaccactggtcagt
taacaaagataatccagggacctcaggaatccttctcagattttgtggcc
agaatgacagaggcagcagagcgtatttttggagagtcagagcaagctgc
gcctctgatagaacagctaatctatgagcaagccacaaaggagtgccgag
cggccatagccccaagaaagaacaaaggcttacaagactggctcaggtct
gtcgagagcttgggggacctctcaccaatgcagcttagcggccgccatcc
tccaatctcaaaccgctcatgggcagaaatatcagagacatgtttattgc
gaaagctggcatttagaaagatgcagagctcagatacaggggggactctc
actcttgctctagtgtgcagctaatcatagagctgacattcgctctgtga
agaataaagggcgatctcccactgatgtcatcagctagtgctaaacggtt
cattcggccctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_63731103_63732105
seq2: B6Ng01-265A05.b_46_1047 (reverse)

seq1  CTCTCTCTCCCCTCTCTCTCTCTCCCTCTCTCTCATCATTTCATTTATTT  50
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCT-CCCTCTCTCTCTCTCCCTCTCTCTCATCATTTCATTTATTT  49

seq1  GTTTGAAGGAAAGGGGTAGTGAAGCTACTTCGTAGCAATGTTCAGCAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAGGAAAGGGGTAGTGAAGCTACTTCGTAGCAATGTTCAGCAACC  99

seq1  ATTCAGAGTGTAAAACAGGTAACCAGAACTCAGTCACCTTATAAGCTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAGTGTAAAACAGGTAACCAGAACTCAGTCACCTTATAAGCTTGA  149

seq1  CATATTTTGCTCTTTATCATTTTATACCATCTCCTGCCTCTTGCGAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTGCTCTTTATCATTTTATACCATCTCCTGCCTCTTGCGAACAT  199

seq1  TAATCTATTACTTGTTTATACAGTTTTAATATAACCTTTATAAATAACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTATTACTTGTTTATACAGTTTTAATATAACCTTTATAAATAACTG  249

seq1  AGATGTGACATTTGTTTTCTATTGTTCTTATTTCTATTACTGAGTGCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGACATTTGTTTTCTATTGTTCTTATTTCTATTACTGAGTGCATA  299

seq1  TGGGTGGATTTAAGGGATGTTGTGTGATTTCATTTACTAAATATAATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGATTTAAGGGATGTTGTGTGATTTCATTTACTAAATATAATTTC  349

seq1  AGTCTTCACTTATGAAGACTGATGAGGAAACACAGACTGTATTTCTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCACTTATGAAGACTGATGAGGAAACACAGACTGTATTTCTTTTT  399

seq1  TGTTTGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTTGGTTTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTTGGTTTTTGG  449

seq1  GTTTTTTTGTTTGGTTTTGTTGTTGGTGGTGGTTTTTGGGTTTTTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTGTTTGGTTTTGTTGTTGGTGGTGGTTTTTGGGTTTTTTGTTT  499

seq1  GGTTTTGTTGGTGGTGGTGGTTTTTTGTTTGTTTGGGTTTTTTTGTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGTTGGTGGTGGTGGTTTTTTGTTTGTTTGGGTTTTTTTGTGTTT  549

seq1  TTTGTTTGTTTGTTTGTTTTTTTGAGACAGGGTTTCTCTGTGTAGTCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTGTTTGTTTTTTTGAGACAGGGTTTCTCTGTGTAGTCCTG  599

seq1  GCTGTCCTGGAACTCACTCTAGTCCGGGATGGCCTCAAACTCAGAAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCTGGAACTCACTCTAGTCCGGGATGGCCTCAAACTCAGAAATTC  649

seq1  GCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACAACCGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACAACCGTGC  699

seq1  CTGGCTAAGACAGTATTTCTTAACTTTCAATAGCTTACTGAAGATTGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTAAGACAGTATTTCTTAACTTTCAATAGCTTACTGAAGATTGCAT  749

seq1  CGAAAAAAGTCTTCTAAAAGAGGCAAAATTATTTTATAGCCATTAAGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAAAAGTCTTCTAAAAGAGGCAAAATTATTTTATAGCCATTAAGTTA  799

seq1  TAATTATATAAATACATCAATATCTTATCTCAAACTCTAATTGTTACTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATATAAATACATCAATATCTTATCTCAAACTCTAATTGTTACTTC  849

seq1  ATGTTTTATCTTTAACAAAAATAGCCACAAAAGCTGCTATTGAGAAAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTATCTTTAACAAAAATAGCCACAAAAGCTGCTATTGAGAAAATT  899

seq1  CTTCTGCAGTCTGTAAAAGAGCTTTGCTTCCATGAAAATAGCTGTGTCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCAGTCTGTAAAAGAGCTTTGCTTCCATGAAAATAGCTGTGTCAC  949

seq1  AGCTTCATTCTAGATTTATACATGATCATTGTAATTGGGTAGGAATTGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCATTCTAGATTTATACATGATCATTGTAATTGGGTAGGAATTGAA  999

seq1  TTC  1003
      |||
seq2  TTC  1002


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