BAC Information

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BAC

Clone NameB6Ng01-266B18
Chromosome12 (Build37)
Map Location 19,606,200 - 19,607,385
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668553, LOC668558, LOC100042641, LOC668568, LOC668570, EG668413, LOC671401, EG546524, EG668584, EG544848, EG627871, LOC100042698, LOC629055
Downstream geneEG668588, LOC100042706, EG668594, EG668600, LOC100042727, LOC673301, EG668605, LOC668614, LOC100042751, LOC100043371, EG668455, LOC100042755
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266B18.bB6Ng01-266B18.g
ACCGA069589GA069590
length1,1961,167
definitionB6Ng01-266B18.b B6Ng01-266B18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctatagaacaggctggcctctaactcagaaatgcacctgcc
tctgcctcccaattgttgggattaaaggcatgtgccaccactgcctggcc
agatagttgtaagccaccatgtgtgtgctaggaactgaaccccattcctc
tggaggagcaacaagtgcttttaactgccaagtcatcatttctccacacc
accactatttttaaaacacactcacacacatgcacacacatgtacaagtg
cacacatacacatgcacacacacacatgcacaagtgcacacatacacatg
cacacatacacacacattttaaagtttttgtcattattgtatgtggatgt
ttgctttcatgtatgtctgagcaccacatgcatgcagtgctctcagagac
cagagagggcatcacatcccctggaactggaatgacagatgattgtaaac
ttctgtgctgggtgttgaacctgctctcaacctctgaatcatcccacctt
taaaaggtgttcttccactgagctatgccctagatgttctcatgtctaca
ccacgagtctttgctctagtgttcatgatcccattatccatgttttgtgt
ttgtttctgcaaagaaagaaaataccttaggaagctcatccttgggccca
gacgattgtgtttgttcttattttttgagacagggtcaactttgtagcct
ggatagcctggaattttcttgtagaccaggctggcctcaaactcacagag
atttgcctgcctatacattcctgagttctgggattaaaagtaagtgccac
catgcccagtttaggcctcaacatttgaaaatgtgtgttttctgggtcac
cttatggctgactttagaaatgaatgacaagcacatctatcctcagctta
tttaacagaacagcacacaaagactgtttaattttgtcattttaataaag
tctgtagactctctgtgctgaaataacgtagtcagtccctagataaagga
gcccttaaactagggtctgtggcagctagtcaagtgagcctcttgctacc
agtcaggaagctggatttggacttggtggtggtgtgtagaaatagtacat
gggtggtatatcaactgtgcattctccttccagttccattagtctgcagc
tggaaattgccttcggtaggtgatattttacaccagaagaaatggg
gaattctccactttccttggttagggggtacaggatggcagccagtgttg
taaacccaggtatccaaagtctgcagaacccagcggtgcccaagaatttt
ctaacctgtcttggagtagccggtgttggtatttgagtcacagtcctttt
tctatcctctgtcagccaccgtttttcatcccggtgggtatatcccaaat
agactacttccatctgacatagctgggcttttgtagcagaggcccggtaa
cccaactcacccagttctgctagcaatctcttggtcccctgccagcattc
tctctccgtggttgcagcaaggagtaagtcatcaacatattgaagcagag
ttatctgggagttttcagctcgaaaggaggctaaatctcaatgtagagcc
tcatcaaaaagggtgggggagtttttgaacccctgaggtaaccgtgtcca
ggtcaattgtcccatttgtccagtgtcaggatctctccactcaaaggctg
gagagatgggctggctggagggatgtaacttcaggcaaaagaaagcatct
tttcaatcaaatactatgtaccattttcgctccggagggagtgagctgag
gaggttatagggattaggaacagttgggtgaatatcttggaccctcttat
tgacctctctcgggtcttggactggtcagtagtcactcgtgccaggtttc
tttaccggcagtaaaggagtattccagggtgactggcaagttaccaaaat
acctaattgtaatagtctctgaatatgtggcctgattccatctcttgctt
catggctcattgggtattgtcgcactcctataggggttgcatccgttttc
agtcccacgaccacaggggaactctgaaagccattcccatgccctccagt
ctctgcccatgctctgggggaaagcagtcaaccaatctttttaagtctgg
catctccgtttgcttttgctttctagaaaaacaaatgggggctctgtagg
gccctgcatcactctctacctaccaaatgtgggtgtctcatcgcctccct
ttagactagagcccggcgtaacagtcacctctcctcctttctggacagtt
gttaggtctatctgaccgtcaagaccaggttcaatggtacagattcagtc
gcagtgatgaaggctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_19606200_19607385
seq2: B6Ng01-266B18.b_48_1243 (reverse)

seq1  CCCATTT-TTCTGGTGT-AAATA-CACCTA-CGAA-GCAATTTCAAGCTG  45
      ||||||| ||||||||| ||||| |||||| |||| |||||||| |||||
seq2  CCCATTTCTTCTGGTGTAAAATATCACCTACCGAAGGCAATTTCCAGCTG  50

seq1  CCAGACT-ATGGAACTGGAAAGAG-ATGCACAG-TGATATACCA-CCATG  91
       |||||| |||||||||||| ||| |||||||| |||||||||| |||||
seq2  -CAGACTAATGGAACTGGAAGGAGAATGCACAGTTGATATACCACCCATG  99

seq1  TACTATTTCTAC-CA-CACACACAAGTTCCCAAACCCAGCTTTCCTGACT  139
      |||||||||||| || |||   |||||  ||||| ||||| |||||||||
seq2  TACTATTTCTACACACCACCACCAAGT--CCAAATCCAGC-TTCCTGACT  146

seq1  GGGTAGC-AGA-GCTCACCTGACTAGCTGCCACAGACCCTAGTTTAA-GG  186
       |||||| ||| |||||| |||||||||||||||||||||||||||| ||
seq2  -GGTAGCAAGAGGCTCACTTGACTAGCTGCCACAGACCCTAGTTTAAGGG  195

seq1  CTCCTTTATCTA-GGACTGACTACGTTATTTCAGCACAGAGAGTCTACAG  235
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTATCTAGGGACTGACTACGTTATTTCAGCACAGAGAGTCTACAG  245

seq1  ACTTTATTAAAATGACAAAA-TAAACAGTCTTTGTGTGCTGTTCTGTTAA  284
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACTTTATTAAAATGACAAAATTAAACAGTCTTTGTGTGCTGTTCTGTTAA  295

seq1  ATAAGCTGAGGATAGATGTGCTTGTCATTCATTTTCTAAAGTCAGCCATA  334
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATAAGCTGAGGATAGATGTGCTTGTCATTCA-TTTCTAAAGTCAGCCATA  344

seq1  AGGTGACCCAGAAAACACACATTTTCAAATGTTGAGGCCTAAACTGGGCA  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACCCAGAAAACACACATTTTCAAATGTTGAGGCCTAAACTGGGCA  394

seq1  TGGTGGCACTTACTTTTAATCCCAGAACTCAGGAATGTATAGGCAGGCAA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCACTTACTTTTAATCCCAGAACTCAGGAATGTATAGGCAGGCAA  444

seq1  ATCTCTGTGAGTTTGAGGCCAGCCTGGTCTACAAGAAAATTCCAGGCTAT  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGTGAGTTTGAGGCCAGCCTGGTCTACAAGAAAATTCCAGGCTAT  494

seq1  CCAGGCTACAAAGTTGACCCTGTCTCAAAAAATAAGAACAAACACAATCG  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTACAAAGTTGACCCTGTCTCAAAAAATAAGAACAAACACAATCG  544

seq1  TCTGGGCCCAAGGATGAGCTTCCTAAGGTATTTTCTTTCTTTGCAGAAAC  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCCCAAGGATGAGCTTCCTAAGGTATTTTCTTTCTTTGCAGAAAC  594

seq1  AAACACAAAACATGGATAATGGGATCATGAACACTAGAGCAAAGACTCGT  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAAAACATGGATAATGGGATCATGAACACTAGAGCAAAGACTCGT  644

seq1  GGTGTAGACATGAGAACATCTAGGGCATAGCTCAGTGGAAGAACACCTTT  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGACATGAGAACATCTAGGGCATAGCTCAGTGGAAGAACACCTTT  694

seq1  TAAAGGTGGGATGATTCAGAGGTTGAGAGCAGGTTCAACACCCAGCACAG  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGGGATGATTCAGAGGTTGAGAGCAGGTTCAACACCCAGCACAG  744

seq1  AAGTTTACAATCATCTGTCATTCCAGTTCCAGGGGATGTGATGCCCTCTC  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTACAATCATCTGTCATTCCAGTTCCAGGGGATGTGATGCCCTCTC  794

seq1  TGGTCTCTGAGAGCACTGCATGCATGTGGTGCTCAGACATACATGAAAGC  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCTGAGAGCACTGCATGCATGTGGTGCTCAGACATACATGAAAGC  844

seq1  AAACATCCACATACAATAATGACAAAAACTTTAAAATGTGTGTGTATGTG  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCCACATACAATAATGACAAAAACTTTAAAATGTGTGTGTATGTG  894

seq1  TGCATGTGTATGTGTGCACTTGTGCATGTGTGTGTGTGCATGTGTATGTG  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGTATGTGTGCACTTGTGCATGTGTGTGTGTGCATGTGTATGTG  944

seq1  TGCACTTGTACATGTGTGTGCATGTGTGTGAGTGTGTTTTAAAAATAGTG  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTTGTACATGTGTGTGCATGTGTGTGAGTGTGTTTTAAAAATAGTG  994

seq1  GTGGTGTGGAGAAATGATGACTTGGCAGTTAAAAGCACTTGTTGCTCCTC  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTGGAGAAATGATGACTTGGCAGTTAAAAGCACTTGTTGCTCCTC  1044

seq1  CAGAGGAATGGGGTTCAGTTCCTAGCACACACATGGTGGCTTACAACTAT  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAATGGGGTTCAGTTCCTAGCACACACATGGTGGCTTACAACTAT  1094

seq1  CTGGCCAGGCAGTGGTGGCACATGCCTTTAATCCCAACAATTGGGAGGCA  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCAGGCAGTGGTGGCACATGCCTTTAATCCCAACAATTGGGAGGCA  1144

seq1  GAGGCAGGTGCATTTCTGAGTTAGAGGCCAGCCTGTTCTATAGAGTGAAT  1184
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGTGCATTTCTGAGTTAGAGGCCAGCCTGTTCTATAGAGTGAAT  1194

seq1  TC  1186
      ||
seq2  TC  1196