BAC Information

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BAC

Clone NameB6Ng01-266P21
Chromosome12 (Build37)
Map Location 26,475,402 - 26,476,524
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668719, Mboat2, EG629397, C330002I19Rik, Id2, LOC100042973, LOC100042974
Downstream geneLOC668726, Rnf144, Rsad2, Tyki, LOC668731, 1700020D12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266P21.bB6Ng01-266P21.g
ACCGA070242GA070243
length6011,123
definitionB6Ng01-266P21.b B6Ng01-266P21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagaacagacagtgtgtagcaagttagtgaagtgcctcctgga
ccctcacaggtcccaaccttctccaaattattccatatctatctacagcc
cattgtcagctatacttaattggtccaattccaattgccctgatcctcat
cctggaaaaatgtcttcaaggtgtctctggtctgtggccctgactctcca
actgtcttattggccaagaattctgtctcttttatattacctctctctct
ctctctctctctctctctctctctctctctctctctctctctctctctct
ctctttctctctttgggttgtcttgtgtatgtgtgtgagcgtgtgtgtgt
gcaatcacatactttatattttaaaatctgtaaatattttttattctagc
tataaaaattagtatgtatatgtaaaaataaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaatttattattttgtgtttgtgtgtgtgagaaac
tgtgagacatagacacatacatatatagacatatatagacggagatagga
ctccgagagacacactctctcacattttttttttttttctgtatagtttg
t

gaattctttggtacttgagccatagctcagtaactctgtcgcatgttcgt
tttcttgcaaacatgacacaacctagagtcactggggtagagggaacact
aattgaacaattacctccatcagttggtctgtgaccatgtctgtgtggga
gtcttgtgagtgtgcatgatgccatccatccctgggtaggtgtgcttggg
ctatacaagagagctagctaaacacaagtcagagggaaagccagtaagca
gtgttcctccatgatttctgcttccagctcctgccttggattctatcttg
gcttccctcagtgatggcctgtaagctaatgaaataaaccctctcctccc
ccaagttgcttttggtcatggtgtttaccacagcaacagaaagcaaacta
gaataaatgatatataaaatgcgactagacagggtagatttatggttcat
ttgtatgttcaaacctaaatagaaatgaaaatgagcaagctcatacatga
aacatgaaatatcttacagaagtaatgaggagttaagccaagagaacaca
aagagaacacactgtaccattgcgttggcacagacacacaaatctgcagg
ctggaagtggggtgagtgagtacttcagggaggaggtatgtgggcctcag
gccagagttggcctcctcccctgctggtaatactgtagttcacagtctga
gtatcatacttagatgggttcgggatgtgaaatgacgtgacctaagctct
gctgactctacacactcttcccagtctatgttgcaattcaaggaacattt
aaagctcctctgtatgtcatactgctttattgtatacccttgttctgagc
tatggtggagaagcagccaactgcacaagatcttaagtttgggcgacaca
ttcttttgttgattcagcataatattttaagaactgcatgcaaagccttt
gaaagctgcccagatttctggatggagaaagttgactgaacattgtaact
gccttctcattccataagcacccattgaattggcagagatacatactgtg
cttaaacacaggaggaagctagcagtggctagaattttttgagaatatct
gggggaacgaatggcagattgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_26475402_26476524
seq2: B6Ng01-266P21.g_67_1189

seq1  GAATTCTTTGGTACTTGAGCCATAGCTCAGTAACTCTGTCGCATGTTCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGTACTTGAGCCATAGCTCAGTAACTCTGTCGCATGTTCGT  50

seq1  TTTCTTGCAAACATGACACAACCTAGAGTCACTGGGGTAGAGGGAACACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGCAAACATGACACAACCTAGAGTCACTGGGGTAGAGGGAACACT  100

seq1  AATTGAACAATTACCTCCATCAGTTGGTCTGTGACCATGTCTGTGTGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAACAATTACCTCCATCAGTTGGTCTGTGACCATGTCTGTGTGGGA  150

seq1  GTCTTGTGAGTGTGCATGATGCCATCCATCCCTGGGTAGGTGTGCTTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTGAGTGTGCATGATGCCATCCATCCCTGGGTAGGTGTGCTTGGG  200

seq1  CTATACAAGAGAGCTAGCTAAACACAAGTCAGAGGGAAAGCCAGTAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAAGAGAGCTAGCTAAACACAAGTCAGAGGGAAAGCCAGTAAGCA  250

seq1  GTGTTCCTCCATGATTTCTGCTTCCAGCTCCTGCCTTGGATTCTATCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCTCCATGATTTCTGCTTCCAGCTCCTGCCTTGGATTCTATCTTG  300

seq1  GCTTCCCTCAGTGATGGCCTGTAAGCTAATGAAATAAACCCTCTCCTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCTCAGTGATGGCCTGTAAGCTAATGAAATAAACCCTCTCCTCCC  350

seq1  CCAAGTTGCTTTTGGTCATGGTGTTTACCACAGCAACAGAAAGCAAACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTGCTTTTGGTCATGGTGTTTACCACAGCAACAGAAAGCAAACTA  400

seq1  GAATAAATGATATATAAAATGCGACTAGACAGGGTAGATTTATGGTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATGATATATAAAATGCGACTAGACAGGGTAGATTTATGGTTCAT  450

seq1  TTGTATGTTCAAACCTAAATAGAAATGAAAATGAGCAAGCTCATACATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGTTCAAACCTAAATAGAAATGAAAATGAGCAAGCTCATACATGA  500

seq1  AACATGAAATATCTTACAGAAGTAATGAGGAGTTAAGCCAAGAGAACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAAATATCTTACAGAAGTAATGAGGAGTTAAGCCAAGAGAACACA  550

seq1  AAGAGAACACACTGTACCATTGCGTTGGCACAGACACACAAATCTGCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAACACACTGTACCATTGCGTTGGCACAGACACACAAATCTGCAGG  600

seq1  CTGGAAGTGGGGTGAGTGAGTACTTCAGGGAGGAGGTATGTGGGCCTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGTGGGGTGAGTGAGTACTTCAGGGAGGAGGTATGTGGGCCTCAG  650

seq1  GCCAGAGTTGGCCTCCTCCCCTGCTGGTAATACTGTAGTTCACAGTCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGTTGGCCTCCTCCCCTGCTGGTAATACTGTAGTTCACAGTCTGA  700

seq1  GTATCATACTTAGATGGGTTCGGGATGTGAAATGACGTGACCTAAGCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATACTTAGATGGGTTCGGGATGTGAAATGACGTGACCTAAGCTCT  750

seq1  GCTGACTCTACACACTCTTCCCAGTCTATGTTGCAATTCAAGGAACATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTCTACACACTCTTCCCAGTCTATGTTGCAATTCAAGGAACATTT  800

seq1  AAAGCTCCTCTGTATGTCATACTGCTTTATTGTATACCCTTGTTCTGAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCCTCTGTATGTCATACTGCTTTATTGTATACCCTTGTTCTGAGC  850

seq1  TATGGTGGAGAAGCAGCCAACTGCACAAGATCTTAAGTTT-GGCGACACA  899
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TATGGTGGAGAAGCAGCCAACTGCACAAGATCTTAAGTTTGGGCGACACA  900

seq1  TTC-TTTGTTGATTCAGCATAATA-TTTAAGAACTGCATGCAAAAGCCTT  947
      ||| |||||||||||||||||||| |||||||||||||||| ||||||||
seq2  TTCTTTTGTTGATTCAGCATAATATTTTAAGAACTGCATGC-AAAGCCTT  949

seq1  TGAAAGCTGCCCAGATTTCTGGATGGAGAAAGTGGACTGAACATTGTAAC  997
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGAAAGCTGCCCAGATTTCTGGATGGAGAAAGTTGACTGAACATTGTAAC  999

seq1  TG-CTTCTCATTCCATAAGCACCCATTGAATTGGCAGAGGATACATAACT  1046
      || ||||||||||||||||||||||||||||||||||| ||||||| |||
seq2  TGCCTTCTCATTCCATAAGCACCCATTGAATTGGCAGA-GATACAT-ACT  1047

seq1  GTGCTTAAACACAAGGAAGGGAGCCAGCAGTGAGCCAG-ATATTTTGAG-  1094
      |||||||||||||  | ||| ||| ||||||| || || || ||||||| 
seq2  GTGCTTAAACACA--GGAGGAAGCTAGCAGTG-GCTAGAATTTTTTGAGA  1094

seq1  ATATCCTGGGAGACAGAAT-GCAGATTGGA  1123
      |||| ||||| ||  |||| ||||||||||
seq2  ATAT-CTGGGGGAACGAATGGCAGATTGGA  1123


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