BAC Information

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BAC

Clone NameB6Ng01-267L11
Chromosome12 (Build37)
Map Location 120,681,665 - 120,682,856
singlet/doubletsinglet
Overlap gene4732474O15Rik
Upstream geneLOC100042993, LOC668611, EG668615, LOC620665, Sp8, Abcb5, Itgb8, EG627557, LOC100043011
Downstream geneLOC668632, LOC668633, Gm528, LOC100043017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267L11.bB6Ng01-267L11.g
ACCGA070764GA070765
length1,1901,223
definitionB6Ng01-267L11.b B6Ng01-267L11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaccaggttaaactgtgattattccaaaactgtcataaaaga
aaatgctaacacacatgtctggatatctaccagaatgagagacatatgca
gatattcttacatgaagttttctgtttaaatatgaacattttttagatta
tttcctctgtcaacttacttatatgtgcttacaataaatatgcctctact
tgctttgtaggtagcaaaatgctaatcagtgaaagagcctattgttggcc
acgagaaattggtcgaagtagatctgaaggaaatttgattgacatggaag
cctcgaaacgctcaaaaaatcaaaatattacaggtacaaaagtttataat
atgataatattattatgtaaataaatcaaataattaccagtacataggga
atgtttgcctctaaaaggtgctatcaaaattatcgagtacaagtgctatc
acagaatagaaatcattaaaaataaatgatttcttaagaaagcacactaa
taggggctagagagatgcctcagtgggtaaaatgattgccgtatgagaat
aagaacaaggctttgttttgccaatatacattaaaatccatgtatgagtg
tgcatctgtagtctcagcattatggatcagagactagcaaatacctggag
cttactgcccagcaagtgtaactaaccagtgaactccagcttcagtgctg
tctcaaagataaggtaaggtgtcataaaggaatacacctgaagttgactt
ctggccgccacatgtagatagaattgtgtgtaccccttccaacacatata
aaacacacacacacagagacacacaaataaagaaaccacactcacagatt
aaaacagatatcaaaaaaagaggcacaaattaacaagtgaatagtatatc
ctgcaaatattgtaaacttcgggggatagagatgaagatacacaagggac
tgagaaaccctatttctcgcctgagctagtatctcgcggcaagaattcac
tcggaacaaccggatcctttctacagcaagcttttattgctacttctcag
aagaccccgacccagaaaatgcgctgcttattatagcccacagcgtgacg
gttcagcactgaatgtggcgtgacaggcactgatagtgctccgcccatca
cccatactacgctctaggaatggcagtgactggaggtgtg

gaattcctaatctctccaattgttttaacatgaaggggtgttgtattttg
tcaaatgcttttcagtatctaaggagatgatcatgtgatttttttctttg
agtttgtttatatattggtttacaaaatggattttgtatattaaaccaac
cttgcatacctgaaatgaagcctacttgaccatggtgaatgatggttttg
atgtgttcttggattaggtttgcaagaattttattgagtatttttgcttt
gatattcataagcaagattggtctgaagttttctttttggttgggtcctt
gggtagtttatgtatcaaaataattatggcttcatagaatgacttaggaa
gtgttctttctggttctactttatgagctagtttgaggaaaattggtatc
aggtcttctttgaaggtacagtagaattctgcactaaatccatctgtccc
tgggctttttttggttggtagatttttaatgacttcttccatttccttgt
gtgttatgggcctgtttagatagtttacctgctcttgatttaactttggg
atgtggcatctcattagaaaaccatccatttcctctagattttccagttt
tgttgagtatagacttgtatagtaggatctgatgattttttgaatttcct
ctgtttttgttgttatgttccttttgatttctgattttattaatttggat
attgcctcttggccctttaattattttggctatggatttatctatcttgt
tgagtctctcaaagaattagcttctagttttgctgattctttgtattgtt
ttctttgttttctatttggttgagtttggccctgaatttgactatttcct
gccttctactcctctggggcaaaaagtttgctttttttgtgttctagagt
tctcaggtgtgctgtgaagtttgttagtgtaagatctctccagtttcttt
taccaaggcattttagtactatgaactgttctcttagccactgtttcatt
gtgtcccataagtttgtgtatgatgtgtcaacatttttcattaaaattct
agaagtctttaatttctttctttatttttcttcctgacagttgtcattgg
gttgtcagtttctacatgtatgtaggcattatctgagactttctgcttat
aaggaccgactttatgcatatttgggtgatactctgatatggagcataca
cgtgaggtgattgcactctaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_120681665_120682856
seq2: B6Ng01-267L11.b_43_1232

seq1  GAATTCTTTACCAGGTTAAACTGTGATTATTCCAAAACTGTCATAAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACCAGGTTAAACTGTGATTATTCCAAAACTGTCATAAAAGA  50

seq1  AAATGCTAACACACATGTCTGGATATCTACCAGAATGAGAGACATATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTAACACACATGTCTGGATATCTACCAGAATGAGAGACATATGCA  100

seq1  GATATTCTTACATGAAGTTTTCTGTTTAAATATGAACATTTTTTAGATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCTTACATGAAGTTTTCTGTTTAAATATGAACATTTTTTAGATTA  150

seq1  TTTCCTCTGTCAACTTACTTATATGTGCTTACAATAAATATGCCTCTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTGTCAACTTACTTATATGTGCTTACAATAAATATGCCTCTACT  200

seq1  TGCTTTGTAGGTAGCAAAATGCTAATCAGTGAAAGAGCCTATTGTTGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTAGGTAGCAAAATGCTAATCAGTGAAAGAGCCTATTGTTGGCC  250

seq1  ACGAGAAATTGGTCGAAGTAGATCTGAAGGAAATTTGATTGACATGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGAAATTGGTCGAAGTAGATCTGAAGGAAATTTGATTGACATGGAAG  300

seq1  CCTCGAAACGCTCAAAAAATCAAAATATTACAGGTACAAAAGTTTATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGAAACGCTCAAAAAATCAAAATATTACAGGTACAAAAGTTTATAAT  350

seq1  ATGATAATATTATTATGTAAATAAATCAAATAATTACCAGTACATAGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAATATTATTATGTAAATAAATCAAATAATTACCAGTACATAGGGA  400

seq1  ATGTTTGCCTCTAAAAGGTGCTATCAAAATTATCGAGTACAAGTGCTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGCCTCTAAAAGGTGCTATCAAAATTATCGAGTACAAGTGCTATC  450

seq1  ACAGAATAGAAATCATTAAAAATAAATGATTTCTTAAGAAAGCACACTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATAGAAATCATTAAAAATAAATGATTTCTTAAGAAAGCACACTAA  500

seq1  TAGGGGCTAGAGAGATGCCTCAGTGGGTAAAATGATTGCCGTATGAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGCTAGAGAGATGCCTCAGTGGGTAAAATGATTGCCGTATGAGAAT  550

seq1  AAGAACAAGGCTTTGTTTTGCCAATATACATTAAAATCCATGTATGAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAAGGCTTTGTTTTGCCAATATACATTAAAATCCATGTATGAGTG  600

seq1  TGCATCTGTAGTCTCAGCATTATGGATCAGAGACTAGCAAATACCTGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTGTAGTCTCAGCATTATGGATCAGAGACTAGCAAATACCTGGAG  650

seq1  CTTACTGCCCAGCAAGTGTAACTAACCAGTGAACTCCAGCTTCAGTGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGCCCAGCAAGTGTAACTAACCAGTGAACTCCAGCTTCAGTGCTG  700

seq1  TCTCAAAGATAAGGTAAGGTGTCATAAAGGAATACACCTGAAGTTGACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAGATAAGGTAAGGTGTCATAAAGGAATACACCTGAAGTTGACTT  750

seq1  CTGGCCGCCACATGTAGATAGAATTGTGTGTACCCCTTCCAACACATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCGCCACATGTAGATAGAATTGTGTGTACCCCTTCCAACACATATA  800

seq1  AAACACACACACACAGAGACACACAAATAAAGAAACCACACTCACAGATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACACACACACAGAGACACACAAATAAAGAAACCACACTCACAGATT  850

seq1  AAAACAGATATCAAAAAAAGAGGCACAAATTAACAAGTGAATAGTATATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGATATCAAAAAAAGAGGCACAAATTAACAAGTGAATAGTATATC  900

seq1  CTGCAAATATTGTAAACTTCGGGGGATAGAGATGAAGATACAC-AGGGAC  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGCAAATATTGTAAACTTCGGGGGATAGAGATGAAGATACACAAGGGAC  950

seq1  TGAGAAA-CCTAATTCTCGCCTGAGCTAGTATCTCGCCGGCAAGAATTCA  998
      ||||||| |||| ||||||||||||||||||||||| |||||||||||||
seq2  TGAGAAACCCTATTTCTCGCCTGAGCTAGTATCTCG-CGGCAAGAATTCA  999

seq1  CTCGG-ACAACCGGATCC-TTCTACAGCAAAGCTTTTATTGCTTACTTCT  1046
      ||||| |||||||||||| ||||||||| ||||||||||||| |||||||
seq2  CTCGGAACAACCGGATCCTTTCTACAGC-AAGCTTTTATTGC-TACTTCT  1047

seq1  CAGGAAGACCCCGAACCCAGAAAATGGCGCTGCTTA-TATAGCCCACAGC  1095
      || |||||||||| ||||||||||| |||||||||| |||||||||||||
seq2  CA-GAAGACCCCG-ACCCAGAAAAT-GCGCTGCTTATTATAGCCCACAGC  1094

seq1  GTGACGTTTCAGCACCTGATGTGGCGTGACAGCACCTGATTAGTTGCT-C  1144
      |||||| ||||||||   ||||||||||||||   |||| ||| |||| |
seq2  GTGACGGTTCAGCACTGAATGTGGCGTGACAGGCACTGA-TAG-TGCTCC  1142

seq1  GCCCATCACCCCATTACTACGCCCTGAGATGGGCAGTGACTG--GGTGTG  1192
      |||||||||||   |||||||| ||  ||  |||||||||||  ||||||
seq2  GCCCATCACCC--ATACTACGCTCTAGGAATGGCAGTGACTGGAGGTGTG  1190


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