BAC Information

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BAC

Clone NameB6Ng01-273N07
Chromosome12 (Build37)
Map Location 91,770,054 - 91,771,201
singlet/doubletsinglet
Overlap genenone
Upstream geneNrxn3, LOC100039498
Downstream geneLOC100039287, Dio2, LOC100039295, 4930544I03Rik, 4930534B04Rik, 5430427M07Rik, Tshr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273N07.bB6Ng01-273N07.g
ACCGA075297GA075298
length8301,133
definitionB6Ng01-273N07.b B6Ng01-273N07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttaatggggttatttgcttt
tctgaagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggcctt
tttgtcttattgacagtgtcttttgccttgcagaaactttggagtttcat
taggtcccatttgtcaattctcgatcttacagcacaagccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttctttgat
ccatttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacatgataacaaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagtttttaccacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttt
tatccttgagaagagttttgctatttctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatgggattgcattgaatctgtagattgcttttggcagatagccattttt
acaatgtttatcctggcaatccatgagcat

gaattcattagagcagtggctctcaacctatgagtcatgacccttttcgg
gggccaaacaacattttcccagaggtcacctaagaccattggaaaacaca
gatatttacattacaattcataacaatcgcaaaattggagttataaaata
gtgacgaaaataattttgtgtttggggggttcaccacagcatgaagaact
gtattaaagctttgcagcactaagaagggttaggaccactgcattcaaac
atcaggtgaaaataaacacactcttgatattccaaatgagtaaaaaaacc
tatagagaacacgcatcataaactcagctgccgcctcttctcggtctctc
ctaagaaatttatctaccatatttgatttgtaatatttctaatattgcag
gaatgtgcctgggaacagttccaaatgctacacagacattaagagcataa
gaaaagataagaaacgtcatatctaattgatatcttcactgtcactccaa
taccacatcagctccaggaatttgacagttgtaaaaggtagaaattacta
aagctaaaagatactctgttctgagataccagcaagtttctttgaactca
tctctttggtgtgtacttgaacttcacttgtctctccagccacaagagaa
tgttttgtagtctgtcttcatttcctatacagttcatcacacaggcaggt
gtcacaccaataggaaaggcttcccttgccaaatgtcagaaagcaatccc
atgacatctctcatggaactcctctacttaattagggaaactagaatcta
ttcttggctaacctgaagtcttaagtagttagtatttttatttctatgta
tggttcttaaaaataaatttatgctaaaaaagaaatggaatatacttgca
gcgatgtagcgcatctgcgcatgctagccctttttttcttgaagtagacc
tagaaagaagctgccagggtgttatggccctattgtgtctcctccctccc
ttggggggtgttatttaatctcatctggagtgtgtgatgctgctcagcag
atggaagtaggctctagaggtgactggcctgcaccctgcagtcaggaaga
agatgcagctagaatcccagccattcttctcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_91770054_91771201
seq2: B6Ng01-273N07.g_68_1200

seq1  GAATTCATTAGAGCAGTGGCTCTCAACCTATGAGTCATGACCCTTTTCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGAGCAGTGGCTCTCAACCTATGAGTCATGACCCTTTTCGG  50

seq1  GGGCCAAACAACATTTTCCCAGAGGTCACCTAAGACCATTGGAAAACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAAACAACATTTTCCCAGAGGTCACCTAAGACCATTGGAAAACACA  100

seq1  GATATTTACATTACAATTCATAACAATCGCAAAATTGGAGTTATAAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTACATTACAATTCATAACAATCGCAAAATTGGAGTTATAAAATA  150

seq1  GTGACGAAAATAATTTTGTGTTTGGGGGGTTCACCACAGCATGAAGAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACGAAAATAATTTTGTGTTTGGGGGGTTCACCACAGCATGAAGAACT  200

seq1  GTATTAAAGCTTTGCAGCACTAAGAAGGGTTAGGACCACTGCATTCAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAAAGCTTTGCAGCACTAAGAAGGGTTAGGACCACTGCATTCAAAC  250

seq1  ATCAGGTGAAAATAAACACACTCTTGATATTCCAAATGAGTAAAAAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGTGAAAATAAACACACTCTTGATATTCCAAATGAGTAAAAAAACC  300

seq1  TATAGAGAACACGCATCATAAACTCAGCTGCCGCCTCTTCTCGGTCTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAGAACACGCATCATAAACTCAGCTGCCGCCTCTTCTCGGTCTCTC  350

seq1  CTAAGAAATTTATCTACCATATTTGATTTGTAATATTTCTAATATTGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAATTTATCTACCATATTTGATTTGTAATATTTCTAATATTGCAG  400

seq1  GAATGTGCCTGGGAACAGTTCCAAATGCTACACAGACATTAAGAGCATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGCCTGGGAACAGTTCCAAATGCTACACAGACATTAAGAGCATAA  450

seq1  GAAAAGATAAGAAACGTCATATCTAATTGATATCTTCACTGTCACTCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGATAAGAAACGTCATATCTAATTGATATCTTCACTGTCACTCCAA  500

seq1  TACCACATCAGCTCCAGGAATTTGACAGTTGTAAAAGGTAGAAATTACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACATCAGCTCCAGGAATTTGACAGTTGTAAAAGGTAGAAATTACTA  550

seq1  AAGCTAAAAGATACTCTGTTCTGAGATACCAGCAAGTTTCTTTGAACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAAAAGATACTCTGTTCTGAGATACCAGCAAGTTTCTTTGAACTCA  600

seq1  TCTCTTTGGTGTGTACTTGAACTTCACTTGTCTCTCCAGCCACAAGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTGGTGTGTACTTGAACTTCACTTGTCTCTCCAGCCACAAGAGAA  650

seq1  TGTTTTGTAGTCTGTCTTCATTTCCTATACAGTTCATCACACAGGCAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTAGTCTGTCTTCATTTCCTATACAGTTCATCACACAGGCAGGT  700

seq1  GTCACACCAATAGGAAAGGCTTCCCTTGCCAAATGTCAGAAAGCAATCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACACCAATAGGAAAGGCTTCCCTTGCCAAATGTCAGAAAGCAATCCC  750

seq1  ATGACATCTCTCATGGAACTCCTCTACTTAATTAGGGAAACTAGAATCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATCTCTCATGGAACTCCTCTACTTAATTAGGGAAACTAGAATCTA  800

seq1  TTCTTGGCTAACCTGAAGTCTTAAGTAGTTAGTATTTTTATTTCTATGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGCTAACCTGAAGTCTTAAGTAGTTAGTATTTTTATTTCTATGTA  850

seq1  TGGTTCTTAAAAATAAATTTATGCTAAAAAAGAAATGGAATATACTTGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTTAAAAATAAATTTATGCTAAAAAAGAAATGGAATATACTTGCA  900

seq1  GCGATGTAGCGCATCTGCGCATGCTAGCCCTTTTTTTCTTGAAGTAGACC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATGTAGCGCATCTGCGCATGCTAGCCCTTTTTTTCTTGAAGTAGACC  950

seq1  TAGAAAGAAGGCTGCCAGGGTGTTAATGGCCTATTGTGTTCTCCTCCCTC  1000
      ||||||||| |||||||||||||||  | ||||||||| |||||||||||
seq2  TAGAAAGAA-GCTGCCAGGGTGTTATGGCCCTATTGTG-TCTCCTCCCTC  998

seq1  CCTT-GGGGGTG-TATTTAATCTCAATCCTGGAGTGTGTGAATGCTGCTC  1048
      |||| ||||||| ||||||||||||   |||||||||||| |||||||| 
seq2  CCTTGGGGGGTGTTATTTAATCTCA--TCTGGAGTGTGTG-ATGCTGCT-  1044

seq1  CAGCAGATGAAAGGTAAGGGCTCTAGAGGTGACTGGCTTGCACCCTTGCC  1098
      ||||||||| || |||  ||||||||||||||||||| ||||||||   |
seq2  CAGCAGATGGAA-GTA--GGCTCTAGAGGTGACTGGCCTGCACCCT--GC  1089

seq1  AGTTCAAGAGAAGAAGAATGCAGTCTAAGATCCCAGCCATTCTTCCTCCA  1148
      || |||   ||||||| |||||| |||  ||||||||||||||| |||||
seq2  AG-TCA--GGAAGAAG-ATGCAG-CTAGAATCCCAGCCATTCTT-CTCCA  1133


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