BAC Information

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BAC

Clone NameB6Ng01-282E01
Chromosome12 (Build37)
Map Location 88,224,701 - 88,225,188
singlet/doubletsinglet
Overlap gene6430527G18Rik
Upstream geneTtll5, Tgfb3, 1700019E19Rik, 1700020O03Rik, LOC100042112, Esrrb, LOC667191, Vash1, Angel1, EG627607, LOC100042650
Downstream gene2310044G17Rik, Zdhhc22, Tmem63c, Ngb, Pomt2, Gstz1, EG625237, Tmed8, Gm263, 4933437F05Rik, AI413782, Ahsa1, Thsd3, Sptlc2, LOC667287, Nrp, 1810035L17Rik, Snw1, LOC100042747, EG544883, EG666806, EG633031, Oog1, LOC100042776, LOC100042778, LOC100042239, LOC100042786, BB287469, LOC100038964, LOC673658, LOC100038992, LOC100038982, LOC674027, LOC100039042, LOC100039052, LOC100039076, LOC100039087, LOC100039100
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282E01.bB6Ng01-282E01.g
ACCGA081520GA081521
length482953
definitionB6Ng01-282E01.b B6Ng01-282E01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tatgcggtcggcgccttcgtaattgacgcaaccacggcatacgggttcgg
agaagtcccagatcatggcccagggcatgcgaggcaggtcgcacaggtag
caagactgtcttcgggacgaggacacctgcgccgccgacatgatgccagc
ctcggggaaggtaggcccccgcccgggctgtttccgaggcgccttctcct
acgggaggactagctggctggggaagaagtccagctgcgggggagggggg
cggaggggagcgagaaagttctgcccctggggcaggagagagcgcgagtc
tccacagccggcgcagcagtgcctctctctcggcgggggctccaccaccc
aggcggccgacgggttccgcacgctcctcgcccccacctcctactgcggc
tgtctggtccagagaagagcaccgggagccttcttcctggtgcggcggat
cagggctgcgagctccgggtctggggggaggg
gaattcactttgtagaccaggctggcctcgaactcagaaatccgcatgcc
tctgcctcccaagtgctgggatcaaaggcgtgtgccaccacgcccggctg
ttttgtttttttaatgttgaagcactcttgcaaacccgagaaaggtttcc
tttgatatgtgtataattctttttgtaaagctgtatttgaattgctacat
tttactgatgtttttgtctatgattttaagttttattaatatctttgtgc
ttagtatcaataaaatggtagtcatagaataaggacgttttcttatgctt
ctatattctggaatagataatgaagaaattgcctatttcttcctttagtg
tttgatgagtttgctagtgaatccatctggtcctggtgtttctcttttgg
aaggaaattgattattgctttgaaatatctagcagatataggactttcca
gatggtctatttcttctggtgagaacgttggcaagttgtgtctatggtgg
cattggcttgttccatggaggctctcaggttggtgggcataaagttgtct
gtaatatccataatcgcttactatcttctcactctctgaagaatgtgcaa
cgtagactccaggtagatattttatcttttaattttgttttctctccttc
cctccctcagccagattcttgtcaatttaagatatagatataatagatag
atagagttggggtaaaacacatataatatagaatttactatcttagtaat
ttttatttatttatttatgtgttgcatagtggtgttgggaaatgaaccca
ggacctctgagaagccaggcaaatgttctaccactactagtctgtgttcc
tgtagttccagtcttttttttttttaataaccaacttgtattttttgaca
ctgtactctgaatgtgacttgtttggaaccttagacatttgtaccacacc
ctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_88224701_88225188
seq2: B6Ng01-282E01.b_46_533

seq1  GAATTCTATGCGGTCGGCGCCTTCGTAATTGACGCAACCACGGCATACGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGCGGTCGGCGCCTTCGTAATTGACGCAACCACGGCATACGG  50

seq1  GTTCGGAGAAGTCCCAGATCATGGCCCAGGGCATGCGAGGCAGGTCGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGGAGAAGTCCCAGATCATGGCCCAGGGCATGCGAGGCAGGTCGCAC  100

seq1  AGGTAGCAAGACTGTCTTCGGGACGAGGACACCTGCGCCGCCGACATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGCAAGACTGTCTTCGGGACGAGGACACCTGCGCCGCCGACATGAT  150

seq1  GCCAGCCTCGGGGAAGGTAGGCCCCCGCCCGGGCTGTTTCCGAGGCGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCTCGGGGAAGGTAGGCCCCCGCCCGGGCTGTTTCCGAGGCGCCT  200

seq1  TCTCCTACGGGAGGACTAGCTGGCTGGGGAAGAAGTCCAGCTGCGGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTACGGGAGGACTAGCTGGCTGGGGAAGAAGTCCAGCTGCGGGGGA  250

seq1  GGGGGGCGGAGGGGAGCGAGAAAGTTCTGCCCCTGGGGCAGGAGAGAGCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGCGGAGGGGAGCGAGAAAGTTCTGCCCCTGGGGCAGGAGAGAGCG  300

seq1  CGAGTCTCCACAGCCGGCGCAGCAGTGCCTCTCTCTCGGCGGGGGCTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTCTCCACAGCCGGCGCAGCAGTGCCTCTCTCTCGGCGGGGGCTCCA  350

seq1  CCACCCAGGCGGCCGACGGGTTCCGCACGCTCCTCGCCCCCACCTCCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCAGGCGGCCGACGGGTTCCGCACGCTCCTCGCCCCCACCTCCTAC  400

seq1  TGCGGCTGTCTGGTCCAGAGAAGAGCACCGGGAGCCTTCTTCCTGGTGCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGCTGTCTGGTCCAGAGAAGAGCACCGGGAGCCTTCTTCCTGGTGCG  450

seq1  GCGGATCAGGGCTGCGAGCTCCGGGTCTGGGGGGAGGG  488
      ||||||||||||||||||||||||||||||||||||||
seq2  GCGGATCAGGGCTGCGAGCTCCGGGTCTGGGGGGAGGG  488