BAC Information

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BAC

Clone NameB6Ng01-282G09
Chromosome12 (Build37)
Map Location 64,240,770 - 64,389,265
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC665713, LOC622746, LOC100040438, 1700047L15Rik, Tspyl-ps, EG665741, EG382606
Downstream geneLOC435302
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282G09.bB6Ng01-282G09.g
ACCGA081626GA081627
length1,0661,146
definitionB6Ng01-282G09.b B6Ng01-282G09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,388,228 - 64,389,265)(64,240,770 - 64,241,906)
sequence
gaattcaaatgaactttttctttacatacgatcacttttcaggtttgtgg
ttgctgttttgagaaggaaatgaaagtacagagttggaagctgtacttga
tgatcttactacatctatttaactccctctatgtcatttgccagacattt
acgaaagaaggctcaagcgatatgtttgcatgtccaatgggcctctcttt
ccagagatggccaactaggccatcttttgatacatatgcagctagaatca
agagctctggggtactggttagttcatattgttgttccacctatagggtt
gcagatccctttagctccttgggttctttctctagctcctccgttggggg
ccctgtgatctatccaatagctgactgtgagcatccacttctgtgtttgc
taggccccggcatagtctcacaagagacagctatatcagggtcctttcag
caattatttatttttcttcaaaaaagaaacagttactttactatttatcg
ttgtgatagcaagtctaactagtctcaaaaaatgcaagaaaaattaaaaa
aaaattttgtgctggtcaagatgatcaacacattagatggcaatataaga
ttggtgtttttaaaatacatatgttaaaattataaaattctgtaaattgc
agagctaaatatacattgatttttaaaagaaaatgagatttaaaaacaga
aaacaaaactatttcttttaactagttttgagaaactatggggttactag
gagaaaatttgtgagcttatatctaaattgatcatttatactactaatac
caccatggtttcagggagcaatttaaaataataagtagaaagaatgcaag
aaactagagggatagggaagggcccttgtgaaatcttgttttttttgtac
atgacatggctaagtctcacccatgaactttacagcaactatttcttact
tatctattctaccgtacacaagatttaaggtagtccaaaaatttctcaat
atcttcttgtttttgaggggtagtccctaaagcctaaccaccacacttga
ggagcggatttttagt

gaattctacagcatggctttctcttataggaaaactaaggaaagcaatca
acttttgcttttttttaaagtaaaacagcaaaataagtttattattatac
acttttaagattagaaatctgtaaggcaaaggtacagtgtcaatggaatg
aaaaggtagtttatagaatgggaaaagattttcattaactccaagttcat
tagagagctaatatctaaattatataaagaacccaggagactagacatca
gcaaatcaaataattcaataaaaaaaggacgggataaacatactaacgga
ggattctcaatagaggaaattcaaatagctgaggaatatagaatatagaa
tagctgaggaatatagaaatttagttgtcaggaaaatacaaatcaaaact
actttgagttcccaactttcaattctcagaatggctaagatcaataatac
aagtgatagctcatgctagtgaggatgtggagcaagcagagcattgtttc
attgctggtgagagtgcaaacctgtacagttactattgactccaatatgg
cagttccagaatggctgagaagtacctcaacttttgctttaatgccacca
ttcaacttttcttcatgaatcttcacatacaacaaataaaatcatgtcac
aacatcattttttgaatgggctattgctaaatgtattaataaagaaacaa
tggcaccacagccatttgctagagcaaggtgaaagtcatgaagccaacac
aaccgtttgacgaagtaccagcaatgttcagccacatgctgcagtcgacc
tgatgcccttttctttctgtttgagtccctaggtgttccactcttggggc
actattaacataatgatcacccatgccttctctgacaaaactgctactgt
atttcctctgataaatttcttgaggtactaccctctactggctaagggaa
gtaacttagctgaccctaattgggtgtcttctctgtgctttggagattga
tatatgtgccctaagcaacttcatgaaacaaaaattattgggatagttgg
gaacttcagaaggagataaaatgttcagaatggactgggcaaattgacag
cagaccagagaacggaacctccttttatagatggtttagaactttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_64388228_64389265
seq2: B6Ng01-282G09.b_44_1109 (reverse)

seq1  ACTATAAAT-CGCTCCTC-AGTGT-GTGG-TAAGCTT--AGGACTACCCT  44
      |||| |||| |||||||| ||||| |||| || ||||   ||||||||| 
seq2  ACTAAAAATCCGCTCCTCAAGTGTGGTGGTTAGGCTTTAGGGACTACCCC  50

seq1  ACAAAA-----CAGAGATTGAGAA---TTTTGACTACCTT-AATCTTGTG  85
       |||||      ||| ||||||||   ||| ||||||||| |||||||||
seq2  TCAAAAACAAGAAGATATTGAGAAATTTTTGGACTACCTTAAATCTTGTG  100

seq1  TAC-GTAG-ATAGAT-AGTA--GAATAGTTGCTGT-AAGTTCATGGGTGA  129
      ||| |||| |||||| ||||   |||||||||||| ||||||||||||||
seq2  TACGGTAGAATAGATAAGTAAGAAATAGTTGCTGTAAAGTTCATGGGTGA  150

seq1  GACTTAGCCATGTCATGTACAAAAAA---CAGATTTCACAA-GGCCCCTC  175
      ||||||||||||||||||||||||||    ||||||||||| ||||| ||
seq2  GACTTAGCCATGTCATGTACAAAAAAAACAAGATTTCACAAGGGCCCTTC  200

seq1  CCTAT-CCTCTAG-TTCTTGCATTCTTTCTACTTATTATTTTAAATTGCT  223
      ||||| ||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCTATCCCTCTAGTTTCTTGCATTCTTTCTACTTATTATTTTAAATTGCT  250

seq1  CCCTG-AACCATGGTGGTATTAGTAGTATAAATGATCAATTTAGATATTA  272
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCCTGAAACCATGGTGGTATTAGTAGTATAAATGATCAATTTAGATA-TA  299

seq1  AGCTCACAAATTTTCTCCTAGTA--CCCATAGTTTCTCAAAAACTAGTTA  320
      |||||||||||||||||||||||  ||||||||||||| |||||||||||
seq2  AGCTCACAAATTTTCTCCTAGTAACCCCATAGTTTCTC-AAAACTAGTTA  348

seq1  AAAGAAATAGTTTTGTTTTCTGTTTTTAAATCTCATTTTCTTTTAAAAAT  370
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATAGTTTTGTTTTCTGTTTTTAAATCTCATTTTCTTTTAAAAAT  398

seq1  CAATGTATATTTAGCTCTGCAATTTACAGAATTTTATAATTTTAACATAT  420
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTATATTTAGCTCTGCAATTTACAGAATTTTATAATTTTAACATAT  448

seq1  GTATTTTAAAAACACCAATCTTATATTGCCATCTAATGTGTTGATCATCT  470
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTAAAAACACCAATCTTATATTGCCATCTAATGTGTTGATCATCT  498

seq1  TGACCAGCACAAAATTTTTTTTTAATTTTTCTTGCATTTTTTGAGACTAG  520
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGCACAAAATTTTTTTTTAATTTTTCTTGCATTTTTTGAGACTAG  548

seq1  TTAGACTTGCTATCACAACGATAAATAGTAAAGTAACTGTTTCTTTTTTG  570
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTTGCTATCACAACGATAAATAGTAAAGTAACTGTTTCTTTTTTG  598

seq1  AAGAAAAATAAATAATTGCTGAAAGGACCCTGATATAGCTGTCTCTTGTG  620
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAATAAATAATTGCTGAAAGGACCCTGATATAGCTGTCTCTTGTG  648

seq1  AGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCT  670
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCT  698

seq1  ATTGGATAGATCACAGGGCCCCCAACGGAGGAGCTAGAGAAAGAACCCAA  720
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATAGATCACAGGGCCCCCAACGGAGGAGCTAGAGAAAGAACCCAA  748

seq1  GGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGAACTAA  770
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGAACTAA  798

seq1  CCAGTACCCCAGAGCTCTTGATTCTAGCTGCATATGTATCAAAAGATGGC  820
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACCCCAGAGCTCTTGATTCTAGCTGCATATGTATCAAAAGATGGC  848

seq1  CTAGTTGGCCATCTCTGGAAAGAGAGGCCCATTGGACATGCAAACATATC  870
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTGGCCATCTCTGGAAAGAGAGGCCCATTGGACATGCAAACATATC  898

seq1  GCTTGAGCCTTCTTTCGTAAATGTCTGGCAAATGACATAGAGGGAGTTAA  920
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAGCCTTCTTTCGTAAATGTCTGGCAAATGACATAGAGGGAGTTAA  948

seq1  ATAGATGTAGTAAGATCATCAAGTACAGCTTCCAACTCTGTACTTTCATT  970
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGTAGTAAGATCATCAAGTACAGCTTCCAACTCTGTACTTTCATT  998

seq1  TCCTTCTCAAAACAGCAACCACAAACCTGAAAAGTGATCGTATGTAAAGA  1020
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTCAAAACAGCAACCACAAACCTGAAAAGTGATCGTATGTAAAGA  1048

seq1  AAAAGTTCATTTGAATTC  1038
      ||||||||||||||||||
seq2  AAAAGTTCATTTGAATTC  1066


seq1: chr12_64240770_64241906
seq2: B6Ng01-282G09.g_65_1210

seq1  GAATTCTACAGCATGGCTTTCTCTTATAGGAAAACTAAGGAAAGCAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAGCATGGCTTTCTCTTATAGGAAAACTAAGGAAAGCAATCA  50

seq1  ACTTTTGCTTTTTTTTAAAGTAAAACAGCAAAATAAGTTTATTATTATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGCTTTTTTTTAAAGTAAAACAGCAAAATAAGTTTATTATTATAC  100

seq1  ACTTTTAAGATTAGAAATCTGTAAGGCAAAGGTACAGTGTCAATGGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTAAGATTAGAAATCTGTAAGGCAAAGGTACAGTGTCAATGGAATG  150

seq1  AAAAGGTAGTTTATAGAATGGGAAAAGATTTTCATTAACTCCAAGTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTAGTTTATAGAATGGGAAAAGATTTTCATTAACTCCAAGTTCAT  200

seq1  TAGAGAGCTAATATCTAAATTATATAAAGAACCCAGGAGACTAGACATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGCTAATATCTAAATTATATAAAGAACCCAGGAGACTAGACATCA  250

seq1  GCAAATCAAATAATTCAATAAAAAAAGGACGGGATAAACATACTAACGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCAAATAATTCAATAAAAAAAGGACGGGATAAACATACTAACGGA  300

seq1  GGATTCTCAATAGAGGAAATTCAAATAGCTGAGGAATATAGAATATAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTCAATAGAGGAAATTCAAATAGCTGAGGAATATAGAATATAGAA  350

seq1  TAGCTGAGGAATATAGAAATTTAGTTGTCAGGAAAATACAAATCAAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGAGGAATATAGAAATTTAGTTGTCAGGAAAATACAAATCAAAACT  400

seq1  ACTTTGAGTTCCCAACTTTCAATTCTCAGAATGGCTAAGATCAATAATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGAGTTCCCAACTTTCAATTCTCAGAATGGCTAAGATCAATAATAC  450

seq1  AAGTGATAGCTCATGCTAGTGAGGATGTGGAGCAAGCAGAGCATTGTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATAGCTCATGCTAGTGAGGATGTGGAGCAAGCAGAGCATTGTTTC  500

seq1  ATTGCTGGTGAGAGTGCAAACCTGTACAGTTACTATTGACTCCAATATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGGTGAGAGTGCAAACCTGTACAGTTACTATTGACTCCAATATGG  550

seq1  CAGTTCCAGAATGGCTGAGAAGTACCTCAACTTTTGCTTTAATGCCACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCAGAATGGCTGAGAAGTACCTCAACTTTTGCTTTAATGCCACCA  600

seq1  TTCAACTTTTCTTCATGAATCTTCACATACAACAAATAAAATCATGTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTTTTCTTCATGAATCTTCACATACAACAAATAAAATCATGTCAC  650

seq1  AACATCATTTTTTGAATGGGCTATTGCTAAATGTATTAATAAAGAAACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCATTTTTTGAATGGGCTATTGCTAAATGTATTAATAAAGAAACAA  700

seq1  TGGCACCACAGCCATTTGCTAGAGCAAGGTGAAAGTCATGAAGCCAACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCACAGCCATTTGCTAGAGCAAGGTGAAAGTCATGAAGCCAACAC  750

seq1  AACCGTTTGACGAAGTACCAGCAATGTTCAGCCACATGCTGCAGTCGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGTTTGACGAAGTACCAGCAATGTTCAGCCACATGCTGCAGTCGACC  800

seq1  TGATGCCCTTTTCTTTCTGTTTGAGTCCCTAGGTGTTCCACTCTTGGGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCCTTTTCTTTCTGTTTGAGTCCCTAGGTGTTCCACTCTTGGGGC  850

seq1  ACTATTAACATAATGATCACCCATGCCTTCTCTGACAAAACTGCTACTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTAACATAATGATCACCCATGCCTTCTCTGACAAAACTGCTACTGT  900

seq1  A-TTCCTCTGATAAA-TTCTTGAAGGTACTACCCTCTACTGGCTAA-GGA  947
      | ||||||||||||| |||||| ||||||||||||||||||||||| |||
seq2  ATTTCCTCTGATAAATTTCTTG-AGGTACTACCCTCTACTGGCTAAGGGA  949

seq1  AGTAACTTAGCTGACCCTAATTGGGTGTCTTCTCTGTGCTTTGGAGATTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTTAGCTGACCCTAATTGGGTGTCTTCTCTGTGCTTTGGAGATTG  999

seq1  ATATATGTG-CCTAAGCAACTTCATGAAAC-AAAATAATTGGAATAGTT-  1044
      ||||||||| |||||||||||||||||||| ||||| ||||| |||||| 
seq2  ATATATGTGCCCTAAGCAACTTCATGAAACAAAAATTATTGGGATAGTTG  1049

seq1  GGAAC-TCAGAGGAGGATAAAAAGGTTCAGAA-GGACTGGGCAAA-TGAC  1091
      ||||| ||||| |  ||| |||| |||||||| |||||||||||| ||||
seq2  GGAACTTCAGAAGGAGAT-AAAATGTTCAGAATGGACTGGGCAAATTGAC  1098

seq1  AGCAGACCAGAGGACAGAA-CTCCTTTTATAGTATGTTTAGAA-TTTC  1137
      |||||||||||| || ||| ||||||||||||   |||||||| ||||
seq2  AGCAGACCAGAGAACGGAACCTCCTTTTATAGATGGTTTAGAACTTTC  1146


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