BAC Information

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BAC

Clone NameB6Ng01-283B09
Chromosome12 (Build37)
Map Location 120,726,316 - 120,840,342
singlet/doubletdoublet
Overlap geneLOC668632
Upstream geneLOC100042993, LOC668611, EG668615, LOC620665, Sp8, Abcb5, Itgb8, EG627557, LOC100043011, 4732474O15Rik
Downstream geneLOC668633, Gm528, LOC100043017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283B09.bB6Ng01-283B09.g
ACCGA082134GA082135
length1,1141,110
definitionB6Ng01-283B09.b B6Ng01-283B09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,839,236 - 120,840,342)(120,726,316 - 120,727,431)
sequence
gaattccaggttagattcatgattaacctggtaactgttgtttccagggt
ccaaagcacatcatggttgttattctagcacaattttggcagatgtcagt
tagtagaaggacatagagttatttaaggacagcccaaagttagagaggtg
aaatttctgtcttaaatctccatttttcatggttcagtgaaggcctctag
tgggatgtggggttaaaaatgagacataagcaaactatgtctgcattagg
cagtatcttcaccatctgaagtgatcctttccctcttctctggcaaaaac
tatgcaatggactttgatctcttgtaggtagtcaagcaagactcaatgaa
aaacacattcagcaagaaggacaaacaaagatgaccaagggactggttca
aatgaattcttgttcccaggaatctgatccagcaaggtttgcccatactt
agaacacatttcttgatattcaatgccaggtaaaacacttaatgaaattt
tcccttttagcaaaaataagaaaatctttttagaagaatgaaactcacaa
taacacacagaaaatttacccaagaattttgtacttcagttttgtggaaa
ttaagcaagtttcataagaccagtctttattatcacattaattaaaaaat
acaaactgcacaaatgatatattagaaaaaaagaaaacaagctaaaatat
tataaataccttgaaaggccttctgttatttcagatctttaatagtcaaa
aataatgtattgaaaaattgttttcaacttttattcagttttacttgaga
catgcaaaacctattagccatccactgtgctaaatcatttcttagttaaa
aaaaaatcctcttattttattttttatattttattaggtattttcctcat
ttacttttccaatgctatcccaaaaatcccccataccctccccccacccc
actcccctacccacccactcccactttttgggcctggcatttccctgtac
tggggcatataaagtttgcaagcccaatggggcctcttcttttccagtga
tggctgcctaggccatctttttgatacatatgcagcctagagtcagaagc
ttccggggttactg

gaattccttccataaagaaaaaaaaacacaaaaaagaattatatcacttt
ctctttccttattttgcccctcttacccctctcaggtaccatgccttaaa
ctcctttcatgtgctcctactctcaaaataatagcctctcatttttggtt
aatattgttagagaggggtagaaagagaacaaaaatagtacttcacccca
ctgcccacagtgaaagtgggtcttcctacctcaattaatgtaatcttgat
aatcacctacagagatacccaaagctaacctaatttagataatgcctcat
aggtgttcctggaggcttttctctaagaagattctagatctgtcaagttg
accatcaatattaaccatcacaactgcagatatttcttttcactgttcag
gatttaacgctaccaggctttttatctatcatcaaaatccatggtataaa
acatgattgacaaagaatgattgttcattcattcacattctgactgtgaa
gccaaacaaaagagcccacagcactaccagccccaagcatggtttatgtc
aaacttacctcttcttttgaattataaggctagataaccttataaatatc
aatacttcgtaaaaatatcagtagccacttacacaacattagagggtgaa
catttccctggagagaaggctctatctatgggtattgtgtctctcagagt
gtttatggtgctttactctttcacttggcactgtgaaaggctagcttctg
tttaggtttttatctcagtgttctataatggatgctgctagtaaatatgg
aagcaaaattaggaacagtagtctgcagttttaaatgtggtgatatttta
aacttttcattcccaggaacatcaaaagagttaatgcaatgtaataagtt
atttgtaaaaccattatataatgcacacaggcaaaccattcctttgtagt
gcccttagctctagagtgctgttggagcatctgaattaattagagatagg
atattaagattaatctttcttatttgaaaggttcagcagcagaacatttt
tataataaagtgcaaatagagaacttgaagaaacaacacagatagctagg
gagctattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_120839236_120840342
seq2: B6Ng01-283B09.b_44_1157 (reverse)

seq1  CAGT-ACCCCGG-AGCTCTTGACTCTA-GCTGCATATGTATC-AAAAGAT  46
      |||| ||||||| ||||  |||||||| |||||||||||||| |||||||
seq2  CAGTAACCCCGGAAGCTTCTGACTCTAGGCTGCATATGTATCAAAAAGAT  50

seq1  GGCCTAGGCAGCCATCACTGGAAA--GAGAGG-CCCATTGGGCTTGCAAA  93
      ||||||||||||||||||||||||   ||||| |||||||||||||||||
seq2  GGCCTAGGCAGCCATCACTGGAAAAGAAGAGGCCCCATTGGGCTTGCAAA  100

seq1  CTTTATATGCCCCAGTACAGGGAAATGCCAGGGCCAAAAAGTGGGAGTGG  143
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTTTATATGCCCCAGTACAGGGAAATGCCAGGCCCAAAAAGTGGGAGTGG  150

seq1  GTGGGTAGGGGAGTGGGGTGGGGGGAGGGTATGGGGGATTTTTGGGATAG  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTAGGGGAGTGGGGTGGGGGGAGGGTATGGGGGATTTTTGGGATAG  200

seq1  CATTGGAAAAGTAAATGAGGAAAATACCTAATAAAATATAAAAAATAAAA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGAAAAGTAAATGAGGAAAATACCTAATAAAATATAAAAAATAAAA  250

seq1  TAAGAGGATTTTTTTTTAACTAAGAAATGATTTAGCACAGTGGATGGCTA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGATTTTTTTTTAACTAAGAAATGATTTAGCACAGTGGATGGCTA  300

seq1  ATAGGTTTTGCATGTCTCAAGTAAAACTGAATAAAAGTTGAAAACAATTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTTTTGCATGTCTCAAGTAAAACTGAATAAAAGTTGAAAACAATTT  350

seq1  TTCAATACATTATTTTTGACTATTAAAGATCTGAAATAACAGAAGGCCTT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATACATTATTTTTGACTATTAAAGATCTGAAATAACAGAAGGCCTT  400

seq1  TCAAGGTATTTATAATATTTTAGCTTGTTTTCTTTTTTTCTAATATATCA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGTATTTATAATATTTTAGCTTGTTTTCTTTTTTTCTAATATATCA  450

seq1  TTTGTGCAGTTTGTATTTTTTAATTAATGTGATAATAAAGACTGGTCTTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCAGTTTGTATTTTTTAATTAATGTGATAATAAAGACTGGTCTTA  500

seq1  TGAAACTTGCTTAATTTCCACAAAACTGAAGTACAAAATTCTTGGGTAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTTGCTTAATTTCCACAAAACTGAAGTACAAAATTCTTGGGTAAA  550

seq1  TTTTCTGTGTGTTATTGTGAGTTTCATTCTTCTAAAAAGATTTTCTTATT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTGTGTTATTGTGAGTTTCATTCTTCTAAAAAGATTTTCTTATT  600

seq1  TTTGCTAAAAGGGAAAATTTCATTAAGTGTTTTACCTGGCATTGAATATC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTAAAAGGGAAAATTTCATTAAGTGTTTTACCTGGCATTGAATATC  650

seq1  AAGAAATGTGTTCTAAGTATGGGCAAACCTTGCTGGATCAGATTCCTGGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGTGTTCTAAGTATGGGCAAACCTTGCTGGATCAGATTCCTGGG  700

seq1  AACAAGAATTCATTTGAACCAGTCCCTTGGTCATCTTTGTTTGTCCTTCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAATTCATTTGAACCAGTCCCTTGGTCATCTTTGTTTGTCCTTCT  750

seq1  TGCTGAATGTGTTTTTCATTGAGTCTTGCTTGACTACCTACAAGAGATCA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAATGTGTTTTTCATTGAGTCTTGCTTGACTACCTACAAGAGATCA  800

seq1  AAGTCCATTGCATAGTTTTTGCCAGAGAAGAGGGAAAGGATCACTTCAGA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCATTGCATAGTTTTTGCCAGAGAAGAGGGAAAGGATCACTTCAGA  850

seq1  TGGTGAAGATACTGCCTAATGCAGACATAGTTTGCTTATGTCTCATTTTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAAGATACTGCCTAATGCAGACATAGTTTGCTTATGTCTCATTTTT  900

seq1  AACCCCACATCCCACTAGAGGCCTTCACTGAACCATGAAAAATGGAGATT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCACATCCCACTAGAGGCCTTCACTGAACCATGAAAAATGGAGATT  950

seq1  TAAGACAGAAATTTCACCTCTCTAACTTTGGGCTGTCCTTAAATAACTCT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAGAAATTTCACCTCTCTAACTTTGGGCTGTCCTTAAATAACTCT  1000

seq1  ATGTCCTTCTACTAACTGACATCTGCCAAAATTGTGCTAGAATAACAACC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTTCTACTAACTGACATCTGCCAAAATTGTGCTAGAATAACAACC  1050

seq1  ATGATGTGCTTTGGACCCTGGAAACAACAGTTACCAGGTTAATCATGAAT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTGCTTTGGACCCTGGAAACAACAGTTACCAGGTTAATCATGAAT  1100

seq1  CTAACCTGGAATTC  1107
      ||||||||||||||
seq2  CTAACCTGGAATTC  1114


seq1: chr12_120726316_120727431
seq2: B6Ng01-283B09.g_65_1174

seq1  GAATTCCTTCCATAAAGAAAAAAAAACACAAAAAAGAATTATATCACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCATAAAGAAAAAAAAACACAAAAAAGAATTATATCACTTT  50

seq1  CTCTTTCCTTATTTTGCCCCTCTTACCCCTCTCAGGTACCATGCCTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCCTTATTTTGCCCCTCTTACCCCTCTCAGGTACCATGCCTTAAA  100

seq1  CTCCTTTCATGTGCTCCTACTCTCAAAATAATAGCCTCTCATTTTTGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTCATGTGCTCCTACTCTCAAAATAATAGCCTCTCATTTTTGGTT  150

seq1  AATATTGTTAGAGAGGGGTAGAAAGAGAACAAAAATAGTACTTCACCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGTTAGAGAGGGGTAGAAAGAGAACAAAAATAGTACTTCACCCCA  200

seq1  CTGCCCACAGTGAAAGTGGGTCTTCCTACCTCAATTAATGTAATCTTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCACAGTGAAAGTGGGTCTTCCTACCTCAATTAATGTAATCTTGAT  250

seq1  AATCACCTACAGAGATACCCAAAGCTAACCTAATTTAGATAATGCCTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACCTACAGAGATACCCAAAGCTAACCTAATTTAGATAATGCCTCAT  300

seq1  AGGTGTTCCTGGAGGCTTTTCTCTAAGAAGATTCTAGATCTGTCAAGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTCCTGGAGGCTTTTCTCTAAGAAGATTCTAGATCTGTCAAGTTG  350

seq1  ACCATCAATATTAACCATCACAACTGCAGATATTTCTTTTCACTGTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCAATATTAACCATCACAACTGCAGATATTTCTTTTCACTGTTCAG  400

seq1  GATTTAACGCTACCAGGCTTTTTATCTATCATCAAAATCCATGGTATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAACGCTACCAGGCTTTTTATCTATCATCAAAATCCATGGTATAAA  450

seq1  ACATGATTGACAAAGAATGATTGTTCATTCATTCACATTCTGACTGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATTGACAAAGAATGATTGTTCATTCATTCACATTCTGACTGTGAA  500

seq1  GCCAAACAAAAGAGCCCACAGCACTACCAGCCCCAAGCATGGTTTATGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAACAAAAGAGCCCACAGCACTACCAGCCCCAAGCATGGTTTATGTC  550

seq1  AAACTTACCTCTTCTTTTGAATTATAAGGCTAGATAACCTTATAAATATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTACCTCTTCTTTTGAATTATAAGGCTAGATAACCTTATAAATATC  600

seq1  AATACTTCGTAAAAATATCAGTAGCCACTTACACAACATTAGAGGGTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTCGTAAAAATATCAGTAGCCACTTACACAACATTAGAGGGTGAA  650

seq1  CATTTCCCTGGAGAGAAGGCTCTATCTATGGGTATTGTGTCTCTCAGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCCTGGAGAGAAGGCTCTATCTATGGGTATTGTGTCTCTCAGAGT  700

seq1  GTTTATGGTGCTTTACTCTTTCACTTGGCACTGTGAAAGGCTAGCTTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGGTGCTTTACTCTTTCACTTGGCACTGTGAAAGGCTAGCTTCTG  750

seq1  TTTAGGTTTTTATCTCAGTGTTCTATAATGGATGCTGCTAGTAAATATGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTTTTTATCTCAGTGTTCTATAATGGATGCTGCTAGTAAATATGG  800

seq1  AAGCAAAATTAGGAACAGTAGTCTGCAGTTTTAAATGTGGTGATATTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAATTAGGAACAGTAGTCTGCAGTTTTAAATGTGGTGATATTTTA  850

seq1  AACTTTTCATTCCCAGGAACATCAAAAGAGTTAATGCAATGTAAATAAGT  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AACTTTTCATTCCCAGGAACATCAAAAGAGTTAATGCAATGT-AATAAGT  899

seq1  TATTTGTAAAACCATTATATAATGCACACAGGCAAACCATTCCTTTGTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTAAAACCATTATATAATGCACACAGGCAAACCATTCCTTTGTAG  949

seq1  TGCCCTTAGCTCTAGAGGTGCTGTTGGAGCATCTGAAATTTAATTAGAGA  1000
      |||||||||||||||| ||||||||||||||||||||  |||||||||||
seq2  TGCCCTTAGCTCTAGA-GTGCTGTTGGAGCATCTGAA--TTAATTAGAGA  996

seq1  TTAGGATAATTAAGATTTAATCTTTC-TATTTGAAAGGTTCAAGCAGCAG  1049
       |||||| ||||||| |||||||||| |||||||||||||| ||||||||
seq2  -TAGGAT-ATTAAGA-TTAATCTTTCTTATTTGAAAGGTTC-AGCAGCAG  1042

seq1  -ACATTTTTAT-ATAAAGTGGCAATAGAG-ACCTGAAGAAACAACACAAG  1096
       |||||||||| ||||||||  ||||||| || |||||||||||||| ||
seq2  AACATTTTTATAATAAAGTGCAAATAGAGAACTTGAAGAAACAACAC-AG  1091

seq1  AGAAGCTAAGGAGCTATTGA  1116
      |  ||||| |||||||||||
seq2  A-TAGCTAGGGAGCTATTGA  1110


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