BAC Information

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BAC

Clone NameB6Ng01-284C13
Chromosome12 (Build37)
Map Location 38,982,461 - 39,125,773
singlet/doubletdoublet
Overlap geneDgkb
Upstream geneA530016O06Rik, LOC100043139
Downstream geneLOC668824, LOC100043142, Etv1, LOC100043145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284C13.bB6Ng01-284C13.g
ACCGA082932GA082933
length9791,133
definitionB6Ng01-284C13.b B6Ng01-284C13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,982,461 - 38,983,181)(39,124,642 - 39,125,773)
sequence
gaattcattattcctagttaatttctgcatctaaaatatttaatgaaatc
tctccttacatcagcatttgctgaggcattaatgctaagcagctgtgtaa
ccctctgcttcctccattcatggacacatttttggctttgggttatttgt
ttgcttaattgattgattttgttttgcttctgacttatttgtttttaaaa
ctaatattttacctttattcatatttttgagattataattataagattat
attatatgctttttattttaacattccttcctttcttcccccaaactctg
ccatgtaaccgtccctgctctccttcaaattcctggcctatttatttttt
tattgcatgcatatatatatatatatatatatatatatatatatacacat
atatacatatatatatatatatatatacatatatgtgtgcgaatatatat
agatgtatatatgtgcatatatgtatacatatatacacatatacacacgc
agaaatatatatgtatatatacatatatcatgtatatatacatatatatt
tgtaaatataatgtacccaatccatatgatgttacttgtacatacatttt
cacatctgactcttggcatgacaagcagtttgtttccaccatgtctccca
ttccattttcctcagatgcatatgttgttctacagggttgaggtctcatg
ttctgggacctaactttggtgtatccattgggacagcccttgcttaactc
ccatgtgcccagtcatgttggtgaagttttatgggtacatattctggcat
tgctatgaaatgatctcacagcaagctcccttattttctgtttctttacc
atctttactctcctctttctgctgtgtttcttcagacttaaaggataaga
atattttgcaatatattttattgggactgggcttcacaaccctgtgtttt
gattgattgtgttttctaccctttatcat
gaattctttgcagattaggcatatactcctggatagtgttaacctagtga
atgattattgatgcagatatgttcgtttttcagcttccctacagagctca
ggttggtcttgaactagtgattatcttgcccaaatgtcacgactacagac
acatctcataaaactctctcaggacattattttttaaaatagattaagca
aatataaccgatacctaacagaagaaagatgaaaggaagcataccattct
tctaggctgaaaggattattgcattgtatttttagtgcataaaatttgaa
gtattatggaagctttctatcaatatgcagcgatgagactctttcatttc
caaggacaattcttatgacataaagatgactctctgttgttctaaaaacg
tacaaataaataaataaataaattgatgtatgctgaggttccaaattggg
ttctattaataaaatggctttcaaagtattttggtattatgggaaaatgg
gagttttccaggtagcagcatttaaaaaggtgaagagggtagacagaaag
gcacaaagaggaaactggtaacttgtcgaactcccttctgccttgcctgc
caacatgcatccgagggcttttctacagaattgctagagctcttctttac
acctttgttaaccaattcagagcatgaaggcaagcagcctcgaaagatca
tttgaaacaccccttgccctttcctcacgacctcctcgcaccgtgcagct
taaagagtacatcacaactgacttttgtgatcattattgaaagatatctt
tcaatattagctctgatttacacgttggggtgtttgtaaacgtcagacaa
gcaagccacattttggatgagtttgtaaaagtcgaactcacacaacggca
ctttggatgagccctcttttgtgtgtctgcttcattcctttgttggagtt
acacatttttctgtgtgtgggattgaagaatcatggaaaattgccactgt
gtgataaattactgttttcacccgtcaaacatcgaaaatgcacctacgag
ccttcacaacacccattatgcttgtccatctagaccggtttgaagtcagc
agggtgcattctggctgaaatcagtcaggcgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_38982461_38983181
seq2: B6Ng01-284C13.b_46_766

seq1  GAATTCATTATTCCTAGTTAATTTCTGCATCTAAAATATTTAATGAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTATTCCTAGTTAATTTCTGCATCTAAAATATTTAATGAAATC  50

seq1  TCTCCTTACATCAGCATTTGCTGAGGCATTAATGCTAAGCAGCTGTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTACATCAGCATTTGCTGAGGCATTAATGCTAAGCAGCTGTGTAA  100

seq1  CCCTCTGCTTCCTCCATTCATGGACACATTTTTGGCTTTGGGTTATTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGCTTCCTCCATTCATGGACACATTTTTGGCTTTGGGTTATTTGT  150

seq1  TTGCTTAATTGATTGATTTTGTTTTGCTTCTGACTTATTTGTTTTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTAATTGATTGATTTTGTTTTGCTTCTGACTTATTTGTTTTTAAAA  200

seq1  CTAATATTTTACCTTTATTCATATTTTTGAGATTATAATTATAAGATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATTTTACCTTTATTCATATTTTTGAGATTATAATTATAAGATTAT  250

seq1  ATTATATGCTTTTTATTTTAACATTCCTTCCTTTCTTCCCCCAAACTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATGCTTTTTATTTTAACATTCCTTCCTTTCTTCCCCCAAACTCTG  300

seq1  CCATGTAACCGTCCCTGCTCTCCTTCAAATTCCTGGCCTATTTATTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTAACCGTCCCTGCTCTCCTTCAAATTCCTGGCCTATTTATTTTTT  350

seq1  TATTGCATGCATATATATATATATATATATATATATATATATATACACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCATGCATATATATATATATATATATATATATATATATATACACAT  400

seq1  ATATACATATATATATATATATATATACATATATGTGTGCGAATATATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATATATATATATATATATATACATATATGTGTGCGAATATATAT  450

seq1  AGATGTATATATGTGCATATATGTATACATATATACACATATACACACGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTATATATGTGCATATATGTATACATATATACACATATACACACGC  500

seq1  AGAAATATATATGTATATATACATATATCATGTATATATACATATATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATATATGTATATATACATATATCATGTATATATACATATATATT  550

seq1  TGTAAATATAATGTACCCAATCCATATGATGTTACTTGTACATACATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATATAATGTACCCAATCCATATGATGTTACTTGTACATACATTTT  600

seq1  CACATCTGACTCTTGGCATGACAAGCAGTTTGTTTCCACCATGTCTCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTGACTCTTGGCATGACAAGCAGTTTGTTTCCACCATGTCTCCCA  650

seq1  TTCCATTTTCCTCAGATGCATATGTTGTTCTACAGGGTTGAGGTCTCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTTCCTCAGATGCATATGTTGTTCTACAGGGTTGAGGTCTCATG  700

seq1  TTCTGGGACCTAACTTTGGTG  721
      |||||||||||||||||||||
seq2  TTCTGGGACCTAACTTTGGTG  721

seq1: chr12_39124642_39125773
seq2: B6Ng01-284C13.g_69_1201 (reverse)

seq1  ATCGCCTGACTGAATTTCAGCCAG-ATGCACCCTGCTGACTTTCAACGGG  49
      |||||||||||| ||||||||||| |||||||||||||||||  ||| ||
seq2  ATCGCCTGACTG-ATTTCAGCCAGAATGCACCCTGCTGACTTCAAACCGG  49

seq1  TCCTAGATGGGACAGCATAAT-GGTG-TGTG-AGGCTCGTAGGGTGCATT  96
      | ||||||||   |||||||| |||| |||| ||||||||| ||||||||
seq2  T-CTAGATGGACAAGCATAATGGGTGTTGTGAAGGCTCGTA-GGTGCATT  97

seq1  TTCGATGTTTGACGGGTGAAAACAGTAATTTATCACACAAGTGGCAATTT  146
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTCGATGTTTGACGGGTGAAAACAGTAATTTATCACAC-AGTGGCAATTT  146

seq1  TCCATGATTCTTCAATCCCACACACAG-AAAATGTGTAACTCCAACAAAG  195
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCCATGATTCTTCAATCCCACACACAGAAAAATGTGTAACTCCAACAAAG  196

seq1  GAATGAAGCAGACACACAAAAGAGGGCTCATCCAAAGTGCCGTTGTGTGA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAGCAGACACACAAAAGAGGGCTCATCCAAAGTGCCGTTGTGTGA  246

seq1  GTTCGACTTTTACAAACTCATCCAAAATGTGGCTTGCTTGTCTGACGTTT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGACTTTTACAAACTCATCCAAAATGTGGCTTGCTTGTCTGACGTTT  296

seq1  ACAAACACCCCAACGTGTAAATCAGAGCTAATATTGAAAGATATCTTTCA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACCCCAACGTGTAAATCAGAGCTAATATTGAAAGATATCTTTCA  346

seq1  ATAATGATCACAAAAGTCAGTTGTGATGTACTCTTTAAGCTGCACGGTGC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGATCACAAAAGTCAGTTGTGATGTACTCTTTAAGCTGCACGGTGC  396

seq1  GAGGAGGTCGTGAGGAAAGGGCAAGGGGTGTTTCAAATGATCTTTCGAGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGTCGTGAGGAAAGGGCAAGGGGTGTTTCAAATGATCTTTCGAGG  446

seq1  CTGCTTGCCTTCATGCTCTGAATTGGTTAACAAAGGTGTAAAGAAGAGCT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGCCTTCATGCTCTGAATTGGTTAACAAAGGTGTAAAGAAGAGCT  496

seq1  CTAGCAATTCTGTAGAAAAGCCCTCGGATGCATGTTGGCAGGCAAGGCAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAATTCTGTAGAAAAGCCCTCGGATGCATGTTGGCAGGCAAGGCAG  546

seq1  AAGGGAGTTCGACAAGTTACCAGTTTCCTCTTTGTGCCTTTCTGTCTACC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGTTCGACAAGTTACCAGTTTCCTCTTTGTGCCTTTCTGTCTACC  596

seq1  CTCTTCACCTTTTTAAATGCTGCTACCTGGAAAACTCCCATTTTCCCATA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCACCTTTTTAAATGCTGCTACCTGGAAAACTCCCATTTTCCCATA  646

seq1  ATACCAAAATACTTTGAAAGCCATTTTATTAATAGAACCCAATTTGGAAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAAATACTTTGAAAGCCATTTTATTAATAGAACCCAATTTGGAAC  696

seq1  CTCAGCATACATCAATTTATTTATTTATTTATTTGTACGTTTTTAGAACA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCATACATCAATTTATTTATTTATTTATTTGTACGTTTTTAGAACA  746

seq1  ACAGAGAGTCATCTTTATGTCATAAGAATTGTCCTTGGAAATGAAAGAGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGTCATCTTTATGTCATAAGAATTGTCCTTGGAAATGAAAGAGT  796

seq1  CTCATCGCTGCATATTGATAGAAAGCTTCCATAATACTTCAAATTTTATG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCGCTGCATATTGATAGAAAGCTTCCATAATACTTCAAATTTTATG  846

seq1  CACTAAAAATACAATGCAATAATCCTTTCAGCCTAGAAGAATGGTATGCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAAATACAATGCAATAATCCTTTCAGCCTAGAAGAATGGTATGCT  896

seq1  TCCTTTCATCTTTCTTCTGTTAGGTATCGGTTATATTTGCTTAATCTATT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCATCTTTCTTCTGTTAGGTATCGGTTATATTTGCTTAATCTATT  946

seq1  TTAAAAAATAATGTCCTGAGAGAGTTTTATGAGATGTGTCTGTAGTCGTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATAATGTCCTGAGAGAGTTTTATGAGATGTGTCTGTAGTCGTG  996

seq1  ACATTTGGGCAAGATAATCACTAGTTCAAGACCAACCTGAGCTCTGTAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGGGCAAGATAATCACTAGTTCAAGACCAACCTGAGCTCTGTAGG  1046

seq1  GAAGCTGAAAAACGAACATATCTGCATCAATAATCATTCACTAGGTTAAC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGAAAAACGAACATATCTGCATCAATAATCATTCACTAGGTTAAC  1096

seq1  ACTATCCAGGAGTATATGCCTAATCTGCAAAGAATTC  1132
      |||||||||||||||||||||||||||||||||||||
seq2  ACTATCCAGGAGTATATGCCTAATCTGCAAAGAATTC  1133