BAC Information

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BAC

Clone NameB6Ng01-284M04
Chromosome12 (Build37)
Map Location 72,275,340 - 72,413,374
singlet/doubletdoublet
Overlap gene2700049A03Rik, LOC666162, Dact1
Upstream geneGm804, Pygl, Trim9, Txndc1, LOC100040965, LOC100041061, Frmd6, Actr10, Psma3, 3110056K07Rik, Arid4a, Timm9, LOC100041035
Downstream geneLOC100041190, Daam1, LOC666213, LOC666220, Gpr135, LOC100041239, 2810055F11Rik, 1200003C05Rik, 4930403N07Rik, Rtn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284M04.bB6Ng01-284M04.g
ACCGA083383GA083384
length7151,209
definitionB6Ng01-284M04.b B6Ng01-284M04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,275,340 - 72,276,052)(72,412,179 - 72,413,374)
sequence
gaattcatacccactcgaactagttaactgtttataagtaattttgtttt
tcttaggagtttattggaacatgtatgataacaaaaatatattttgaatt
atgtataattgttctcagcaagaagaggtgccccttccaggaactaactt
tgatgccatttttagtaattagagtttatatagtaaggcctagatagtga
acttgaatataatttgacttttattaagatttttaaaagacttattcatt
tcttaaaattatgtgggggcctgtgtgcggctttatatgcatcaggccca
tgcaggtgcccatataagccagagggcactggattcccttaaactggagt
tacggcagttgtgtctgcctggtgtgggcatagtgaaccaaactgtctct
gagagcaacaagtgcttgtaacctgagagacatcactccagtctgtctct
ttttaacttaaaataaaacttttatttggggagtgtgtgtgtgtgtgtgt
aatgcatgtgcatgggtgtgtgaatgtagaggtcagaagacaactttcag
gagttctttcctaacgtgtggttctcagaaatcacactgggtcatctggc
ttgttgacaaatataagccaggtaaagccatcttgtgagccctggttttt
ctttacttttaaaatgatcggaatctgtttctgtcttttgtgagtcagtg
aatgtatatacttac
gaattcagtcccctgaacccaggacagaaggagagaaacagctcctggaa
ttggtcctcagacctccacaagaacgatgtgccacaccgatgcactcatt
tgcatacaccaaacacacaataaattttggatatatatgtggctgagttg
tagttccttggtagagatcttggctattgtgcctgtgttcgatacctggt
actgcaaggatggaaaagatttgtttttagctttcactaatctatacaaa
ctgactttttataggtctgggcaaggaatttgcatagacttcgaatcatc
tggtgtgcagccagtttaaagaaagtccttcacagtgggctcttaaagtc
aaagcaacagattttctacattacactcgaatctttcttaggtgaggttt
tctggccaaatgtcatggcctacagaattttgttttctattagttgctta
gtggggcttaatcagtcttaaggcctttgaaagcgagaaattaatactaa
tagccagcgccaagtataatgtgagctggcagaatccaaaaccctccagg
gaaagcccgtcaagatttgaactcagcttgggtttcccaaggtgacagac
tggttgtgctaactcacactgccatctagtgctccccactgctggaaaag
caaaagaactcgaaaggcatctggtttaaatcaagaatgccaagtctaca
aatgaaaatagtaccataaacattgactggagtggaattctcctgacaca
ctgccttgctcccctgaagcggacaataggaatgcgctgctctctcgatc
tttgagatttcaggaagacaaaaaaaaaaaaaaaaaaggtgctattgtac
aagacaatacccgaaatgtaaacgaccagtcacaacccagaaaagaactg
ggctcaattcacgtacatacaatttctggttctttctaccaagaaacagt
aaaaatgccaaaaacaggagctaattgcacaaaccacaggcacacatcct
ttacaaaataagataccgtggtcctggctcacgacctatgactttctgaa
agcttatggacgttaggccattggcctgtgtggccaaaatggaacttcat
cagaaaatgaatttaatgaaggcattggatgctctgtaactcacaataaa
tctagaactcgtataccagagaatacctggacaccgctcaaacattcact
ttcacgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_72275340_72276052
seq2: B6Ng01-284M04.b_48_762

seq1  GAATTCATACCCACTCGAACTAGTTAACTGTTTATAAGTAATTTTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACCCACTCGAACTAGTTAACTGTTTATAAGTAATTTTGTTTT  50

seq1  TCTTAGGAGTTTATTGGAACATGTATGATAACAAAAATATATTTTGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGAGTTTATTGGAACATGTATGATAACAAAAATATATTTTGAATT  100

seq1  ATGTATAATTGTTCTCAGCAAGAAGAGGTGCCCCTTCCAGGAACTAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATAATTGTTCTCAGCAAGAAGAGGTGCCCCTTCCAGGAACTAACTT  150

seq1  TGATGCCATTTTTAGTAATTAGAGTTTATATAGTAAGGCCTAGATAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCATTTTTAGTAATTAGAGTTTATATAGTAAGGCCTAGATAGTGA  200

seq1  ACTTGAATATAATTTGACTTTTATTAAGATTTTTAAAAGACTTATTCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAATATAATTTGACTTTTATTAAGATTTTTAAAAGACTTATTCATT  250

seq1  TCTTAAAATTATGTGGGGGCCTGTGTGCGGCTTTATATGCATCAGGCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAATTATGTGGGGGCCTGTGTGCGGCTTTATATGCATCAGGCCCA  300

seq1  TGCAGGTGCCCATATAAGCCAGAGGGCACTGGATTCCCTTAAACTGGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTGCCCATATAAGCCAGAGGGCACTGGATTCCCTTAAACTGGAGT  350

seq1  TACGGCAGTTGTGTCTGCCTGGTGTGGGCATAGTGAACCAAACTGTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGCAGTTGTGTCTGCCTGGTGTGGGCATAGTGAACCAAACTGTCTCT  400

seq1  GAGAGCAACAAGTGCTTGTAACCTGAGAGACATCACTCCAGTCTGTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAACAAGTGCTTGTAACCTGAGAGACATCACTCCAGTCTGTCTCT  450

seq1  TTTTAACTTAAAATAAAACTTTTATTTGGGGAGTGTGTGTGTGTGTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACTTAAAATAAAACTTTTATTTGGGGAGTGTGTGTGTGTGTGTGT  500

seq1  AATGCATGTGCATGGGTGTGTGAATGTAGAGGTCAGAAGACAACTTTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATGTGCATGGGTGTGTGAATGTAGAGGTCAGAAGACAACTTTCAG  550

seq1  GAGTTCTTTCCTAACGTGTGGTTCTCAG-AATCACACTGGGTCATCTGGC  599
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAGTTCTTTCCTAACGTGTGGTTCTCAGAAATCACACTGGGTCATCTGGC  600

seq1  TTGTTGACAAATATAAGCCAGGTAAAGCCATCTTGTGAGCCCTGG-TTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTGTTGACAAATATAAGCCAGGTAAAGCCATCTTGTGAGCCCTGGTTTTT  650

seq1  CTTTACTTTTAAAATGATCGGAATCTGTTTCTGTCTTTTGTGAGTCAGTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTTTTAAAATGATCGGAATCTGTTTCTGTCTTTTGTGAGTCAGTG  700

seq1  AATGTATATACTTAC  713
      |||||||||||||||
seq2  AATGTATATACTTAC  715

seq1: chr12_72412179_72413374
seq2: B6Ng01-284M04.g_71_1279 (reverse)

seq1  CCCCCTGAAAGTG-ATG-TTGTGGGTTGT-CACGTGTTTTCTTGTATTAC  47
      |||| |||||||| ||| ||| | | ||| || || || ||| ||| |||
seq2  CCCCGTGAAAGTGAATGTTTGAGCGGTGTCCAGGTATTCTCTGGTA-TAC  49

seq1  GGTTTTCTAGATTTTTTGTGTAGTTACAGAGCATCAAAGTGCTTTTATTT  97
       |  |||||||||| ||||| |||||||||||||| || ||| || ||| 
seq2  -GAGTTCTAGATTTATTGTG-AGTTACAGAGCATCCAA-TGCCTTCATTA  96

seq1  AATTCATTTTTTTCTGATGAAATTCAATTTTTGGCACACAAGCATATGG-  146
      ||||||   |||||||||||| ||| ||||| | |||||| ||  |||| 
seq2  AATTCA---TTTTCTGATGAAGTTCCATTTTGGCCACACAGGCCAATGGC  143

seq1  CTTACGTCTCTAAGCTTTCAG-AAGTCATAGGTCGTGAGCAAGGACCAC-  194
      || |||||  ||||||||||| |||||||||||||||||| |||||||| 
seq2  CTAACGTCCATAAGCTTTCAGAAAGTCATAGGTCGTGAGCCAGGACCACG  193

seq1  GTATC-TATTTTGT-AAGGATGTGTG-CTGTGGTTTGTGCAA-TAGCT-C  239
      ||||| |||||||| ||||||||||| ||||||||||||||| ||||| |
seq2  GTATCTTATTTTGTAAAGGATGTGTGCCTGTGGTTTGTGCAATTAGCTCC  243

seq1  TG-TTTTGGCATTTTTACTGTTTCTTTGGTAG-AAGAA-CAG-AATTGTA  285
      || ||||||||||||||||||||| ||||||| ||||| ||| |||||||
seq2  TGTTTTTGGCATTTTTACTGTTTC-TTGGTAGAAAGAACCAGAAATTGTA  292

seq1  TGTACGTGAATTTGAG-CCAGTTC-TTTCT-GGTTGTGACTGGTCGTTTA  332
      |||||||||| ||||| ||||||| ||||| |||||||||||||||||||
seq2  TGTACGTGAA-TTGAGCCCAGTTCTTTTCTGGGTTGTGACTGGTCGTTTA  341

seq1  CATTTC-GGTATTGTCTTGTACAATAGCACC-TTTTTTTTTTTTTTTTTG  380
      |||||| |||||||||||||||||||||||| ||||||||||||||||||
seq2  CATTTCGGGTATTGTCTTGTACAATAGCACCTTTTTTTTTTTTTTTTTTG  391

seq1  TCTTCCTG-AATCTC-AAGATCGAGAGAGCAGCGCATTCCTATTGTCCGC  428
      |||||||| |||||| ||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGAAATCTCAAAGATCGAGAGAGCAGCGCATTCCTATTGTCCGC  441

seq1  TTCAGGGGAGCAAGGCAGTGTGTCAGGAGAATTCCACTCCAGTCAATGTT  478
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGGAGCAAGGCAGTGTGTCAGGAGAATTCCACTCCAGTCAATGTT  491

seq1  TATGGTACTATTTTCATTTGTAGACTTGGCATTCTTGATTTAAACCAGAT  528
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTACTATTTTCATTTGTAGACTTGGCATTCTTGATTTAAACCAGAT  541

seq1  GCCTTTCGAGTTCTTTTGCTTTTCCAGCAGTGGGGAGCACTAGATGGCAG  578
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCGAGTTCTTTTGCTTTTCCAGCAGTGGGGAGCACTAGATGGCAG  591

seq1  TGTGAGTTAGCACAACCAGTCTGTCACCTTGGGAAACCCAAGCTGAGTTC  628
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTTAGCACAACCAGTCTGTCACCTTGGGAAACCCAAGCTGAGTTC  641

seq1  AAATCTTGACGGGCTTTCCCTGGAGGGTTTTGGATTCTGCCAGCTCACAT  678
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTGACGGGCTTTCCCTGGAGGGTTTTGGATTCTGCCAGCTCACAT  691

seq1  TATACTTGGCGCTGGCTATTAGTATTAATTTCTCGCTTTCAAAGGCCTTA  728
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTGGCGCTGGCTATTAGTATTAATTTCTCGCTTTCAAAGGCCTTA  741

seq1  AGACTGATTAAGCCCCACTAAGCAACTAATAGAAAACAAAATTCTGTAGG  778
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGATTAAGCCCCACTAAGCAACTAATAGAAAACAAAATTCTGTAGG  791

seq1  CCATGACATTTGGCCAGAAAACCTCACCTAAGAAAGATTCGAGTGTAATG  828
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGACATTTGGCCAGAAAACCTCACCTAAGAAAGATTCGAGTGTAATG  841

seq1  TAGAAAATCTGTTGCTTTGACTTCAAGAGCCCACTGTGAAGGACTTTCTT  878
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAGAAAATCTGTTGCTTTGACTTTAAGAGCCCACTGTGAAGGACTTTCTT  891

seq1  TAAACTGGCTGCACACCAGATGATTCGAAGTCTATGCAAATTCCTTGCCC  928
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGGCTGCACACCAGATGATTCGAAGTCTATGCAAATTCCTTGCCC  941

seq1  AGACCTATAAAAAGTCAGTTTGTATAGATTAGTGAAAGCTAAAAACAAAT  978
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTATAAAAAGTCAGTTTGTATAGATTAGTGAAAGCTAAAAACAAAT  991

seq1  CTTTTCCATCCTTGCAGTACCAGGTATCGAACACAGGCACAATAGCCAAG  1028
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCATCCTTGCAGTACCAGGTATCGAACACAGGCACAATAGCCAAG  1041

seq1  ATCTCTACCAAGGAACTACAACTCAGCCACATATATATCCAAAATTTATT  1078
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTACCAAGGAACTACAACTCAGCCACATATATATCCAAAATTTATT  1091

seq1  GTGTGTTTGGTGTATGCAAATGAGTGCATCGGTGTGGCACATCGTTCTTG  1128
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTGGTGTATGCAAATGAGTGCATCGGTGTGGCACATCGTTCTTG  1141

seq1  TGGAGGTCTGAGGACCAATTCCAGGAGCTGTTTCTCTCCTTCTGTCCTGG  1178
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTCTGAGGACCAATTCCAGGAGCTGTTTCTCTCCTTCTGTCCTGG  1191

seq1  GTTCAGGGGACTGAATTC  1196
      ||||||||||||||||||
seq2  GTTCAGGGGACTGAATTC  1209