BAC Information

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BAC

Clone NameB6Ng01-285P07
Chromosome12 (Build37)
Map Location 19,049,644 - 19,156,787
singlet/doubletdoublet
Overlap geneEG668413
Upstream geneEG245297, LOC100042573, LOC668539, LOC100043324, LOC636282, EG632781, LOC668541, LOC673160, 5730507C01Rik, EG668553, LOC668558, LOC100042641, LOC668568, LOC668570
Downstream geneLOC671401, EG546524, EG668584, EG544848, EG627871, LOC100042698, LOC629055, EG668588, LOC100042706, EG668594, EG668600, LOC100042727, LOC673301, EG668605
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285P07.bB6Ng01-285P07.g
ACCGA084273GA084274
length1,081969
definitionB6Ng01-285P07.b B6Ng01-285P07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,049,644 - 19,050,723)(19,155,824 - 19,156,787)
sequence
gaattcccattcggcttgtaccatggtcaactccctatacaaaatacctg
cctttacccctggcttcttaaggctgtgagacggagcacagacagaacat
ggtccctatcattgcatccccaactaactgtccctacatcttgtcctgct
aaagtgccctggaggatttcactgtcttgtaggaggcgagctacccacac
tgtctcactggccctttcctgaggttctggtgggggattcagggggttct
gaggctaacggtgggattggggagcaaaagggtgggctcccttccagccg
ggaagccagtatccccggttccactccatgccctctgagcaatgttggta
gaggtcttggagggtgcagggtgggagccgggcaccgcagcccaggagag
ggcgcgccctcgaaccccagcatgtcccgaaagcagaagcaacgtagacg
accacagccactgacaggccctgagtgcatgtagccctccttcctgaggc
ctctgctacctggcggcgattagcggcgggcgacccgattggtggctagg
actgcgccccgccccgccgggcggtcctctgcgcctccccagccgggccc
tcccctttccgcgggaggcgtcccggacagcggcttggtggcgcgcagtt
cccactgcctgtgcgcgcccgcgtctgggctcctttgcagaggacttgat
agctgcagctcccggagcacagcgggcagagctgcgggctgcgcgcgccc
ttgctgccaccgggcgtcccgcggtggctcccgcgccccgcggcgacttc
cgagcccgcgcttccctttgttcaagtcccggagcggcggcggggtcgga
gcccgcgccctgggcgactgaggcggccacagtccgcgccccggcgccct
ggcgatgccggaccagatctctgtgttcggaattcgtggccgagaccctg
aggactacaaaggcgcccacgggcctctagcttcaccacacgcgcacggc
ccagtgccgcaacacgtggcgccgtcgagagttggagcggttagcgtctc
ctgcacaggaagggaggcctagagtccgggg
gaattctcaccatccttttctcacagatgttgtctggcagggaagcagtc
atgggcagcctgcttgttctgtcagggaagaaagacagacacaatgtgtt
tccccaggctagctcactgggtaagacacaatgtgttaagctgggcagtg
gtggcacaggcctttaatcccagcacttgggaggcagaggcagaggcaag
ctgatttctgagttcgaggccagcctggtctacaaagtgagttccaggac
agccaggactatacagagaaaacctgtctcaaaaaaaaaaacaacaacaa
caacaacaacaaaacaaaaaacaaaacaaaaagacacaatgtgtttcccc
aggctagctcactgttggagcatcatgctctcatgatggtctccactctt
ttgggggacaactctccactcagtccccaggactaataaagacacctaag
gcagatggaatgagaggagatagaataaaattcagactgttccctgggcc
tctgatactgtcaccctatgtatctcaagcaggcttccagttgagggttc
cctggacacccattccatactccacacgattgtgtatcagcggtgagagc
ccagaggtcaagagcacaagttggatgcccgctttcctcactgaccttgt
gatcagacactgttttcagggtttcatgaaaagcacggtcccttatctga
tacagaagaagcccagaacagagggttacatgctgttctcaagagtatgt
tgtcctgactgcctctactaccaccaccaccaacaccaccaccaccaaca
ccactaccaccaccaccaccaccaccaccaccaccaccaccaccaccaac
accactaccaccaccaaaaacacccaagtttcttcctccttgttctcagc
aattggaaactcattctcttctccccaagtttcatgtgtatgctggttac
tttatgtcaacttgaacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_19049644_19050723
seq2: B6Ng01-285P07.b_46_1126

seq1  GAATTCCCATTCGGCTTGTACCATGGTCAACTCCCTATACAAAATACCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTCGGCTTGTACCATGGTCAACTCCCTATACAAAATACCTG  50

seq1  CCTTTACCCCTGGCTTCTTAAGGCTGTGAGACGGAGCACAGACAGAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTACCCCTGGCTTCTTAAGGCTGTGAGACGGAGCACAGACAGAACAT  100

seq1  GGTCCCTATCATTGCATCCCCAACTAACTGTCCCTACATCTTGTCCTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCTATCATTGCATCCCCAACTAACTGTCCCTACATCTTGTCCTGCT  150

seq1  AAAGTGCCCTGGAGGATTTCACTGTCTTGTAGGAGGCGAGCTACCCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCCCTGGAGGATTTCACTGTCTTGTAGGAGGCGAGCTACCCACAC  200

seq1  TGTCTCACTGGCCCTTTCCTGAGGTTCTGGTGGGGGATTCAGGGGGTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCACTGGCCCTTTCCTGAGGTTCTGGTGGGGGATTCAGGGGGTTCT  250

seq1  GAGGCTAACGGTGGGATTGGGGAGCAAAAGGGTGGGCTCCCTTCCAGCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTAACGGTGGGATTGGGGAGCAAAAGGGTGGGCTCCCTTCCAGCCG  300

seq1  GGAAGCCAGTATCCCCGGTTCCACTCCATGCCCTCTGAGCAATGTTGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCAGTATCCCCGGTTCCACTCCATGCCCTCTGAGCAATGTTGGTA  350

seq1  GAGGTCTTGGAGGGTGCAGGGTGGGAGCCGGGCACCGCAGCCCAGGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTTGGAGGGTGCAGGGTGGGAGCCGGGCACCGCAGCCCAGGAGAG  400

seq1  GGCGCGCCCTCGAACCCCAGCATGTCCCGAAAGCAGAAGCAACGTAGACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCGCCCTCGAACCCCAGCATGTCCCGAAAGCAGAAGCAACGTAGACG  450

seq1  ACCACAGCCACTGACAGGCCCTGAGTGCATGTAGCCCTCCTTCCTGAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGCCACTGACAGGCCCTGAGTGCATGTAGCCCTCCTTCCTGAGGC  500

seq1  CTCTGCTACCTGGCGGCGATTAGCGGCGGGCGACCCGATTGGTGGCTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTACCTGGCGGCGATTAGCGGCGGGCGACCCGATTGGTGGCTAGG  550

seq1  ACTGCGCCCCGCCCCGCCGGGCGGTCCTCTGCGCCTCCCCAGCCGGGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCGCCCCGCCCCGCCGGGCGGTCCTCTGCGCCTCCCCAGCCGGGCCC  600

seq1  TCCCCTTTCCGCGGGAGGCGTCCCGGACAGCGGCTTGGTGGCGCGCAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTTCCGCGGGAGGCGTCCCGGACAGCGGCTTGGTGGCGCGCAGTT  650

seq1  CCCACTGCCTGTGCGCGCCCGCGTCTGGGCTCCTTTGCAGAGGACTTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGCCTGTGCGCGCCCGCGTCTGGGCTCCTTTGCAGAGGACTTGAT  700

seq1  AGCTGCAGCTCCCGGAGCACAGCGGGCAGAGCTGCGGGCTGCGCGCGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCAGCTCCCGGAGCACAGCGGGCAGAGCTGCGGGCTGCGCGCGCCC  750

seq1  TTGCTGCCACCGGGCGTCCCGCGGTGGCTCCCGCGCCCCGCGGCGACTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCCACCGGGCGTCCCGCGGTGGCTCCCGCGCCCCGCGGCGACTTC  800

seq1  CGAGCCCGCGCTTCCCTTTGTTCAAGTCCCGGAGCGGCGGCGGGGTCGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCCCGCGCTTCCCTTTGTTCAAGTCCCGGAGCGGCGGCGGGGTCGGA  850

seq1  GCCCGCGCCCTGGGCGACTGAGGCGGCCACAGTCCGCGCCCCGGCGCCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGCGCCCTGGGCGACTGAGGCGGCCACAGTCCGCGCCCCGGCGCCCT  900

seq1  GGCGATGCCGGACCAGATCTCTGTG-TCGGAATTCGTGGCCGAGACCCTT  949
      ||||||||||||||||||||||||| |||||||||||||||||||||| |
seq2  GGCGATGCCGGACCAGATCTCTGTGTTCGGAATTCGTGGCCGAGACCC-T  949

seq1  GAGGACTAC-AAGGCGCCCAC-GGCCTCTAGCTTCACCACACGCGCACGG  997
      ||||||||| ||||||||||| ||||||||||||||||||||||||||||
seq2  GAGGACTACAAAGGCGCCCACGGGCCTCTAGCTTCACCACACGCGCACGG  999

seq1  CCCAGTGCCGCAACACCGTGGCGGCCGTCGAGGAGGT-GAGCGG-TAGCG  1045
      ||||||||||||||| |||||| |||||||| ||| | |||||| |||||
seq2  CCCAGTGCCGCAACA-CGTGGC-GCCGTCGA-GAGTTGGAGCGGTTAGCG  1046

seq1  TCGCCCGCACCGGGAGGGAGG-CTAGAGTCGCGGGG  1080
      || || |||| || ||||||| |||||||| |||||
seq2  TCTCCTGCACAGGAAGGGAGGCCTAGAGTC-CGGGG  1081

seq1: chr12_19155824_19156787
seq2: B6Ng01-285P07.g_66_1034 (reverse)

seq1  TTGTGTCAAGTTGACATAAAGTAACCAGCATACACATG-AACTTGGGGAG  49
      |||| ||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTGT-TCAAGTTGACATAAAGTAACCAGCATACACATGAAACTTGGGGAG  49

seq1  AAGAGAATGAG-TTCCAATTGCTGAGAAC-AGGAGGAAG-AACTTGGGTG  96
      ||||||||||| ||||||||||||||||| ||||||||| ||||||||||
seq2  AAGAGAATGAGTTTCCAATTGCTGAGAACAAGGAGGAAGAAACTTGGGTG  99

seq1  TTTTTGGTGGTGGTAGTGGTGTTGGTGGTGGTGGTGGTGGTGGTGGTGGT  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGTGGTGGTAGTGGTGTTGGTGGTGGTGGTGGTGGTGGTGGTGGT  149

seq1  GGTGGTGGTGGTGGTAGTGGTGTTGGTGGTGGTGGTGTTGGTGGTGGTGG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGGTGGTGGTAGTGGTGTTGGTGGTGGTGGTGTTGGTGGTGGTGG  199

seq1  TAGTAGAGGCAGTCAGGACAACATACTCTTGAGAACAGCATGTAA-CCTC  245
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TAGTAGAGGCAGTCAGGACAACATACTCTTGAGAACAGCATGTAACCCTC  249

seq1  TGTTCTGGGCTTCTTCTGTATCAGATAAGGGACCGTGCTTTTCATGAAAC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGGGCTTCTTCTGTATCAGATAAGGGACCGTGCTTTTCATGAAAC  299

seq1  CCTG-AAACAGTGTCTGATCACAAGGTCAGTGAGGAAAGCGGGCATCCAA  344
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAAACAGTGTCTGATCACAAGGTCAGTGAGGAAAGCGGGCATCCAA  349

seq1  CTTGTGCTCTTGACCTCTGGGCTCTCACCGCTGATACACAATCGTGTGGA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGCTCTTGACCTCTGGGCTCTCACCGCTGATACACAATCGTGTGGA  399

seq1  GTATGGAATGGGTGTCCAGGGAACCCTCAACTGGAAGCCTGCTTGAGATA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGAATGGGTGTCCAGGGAACCCTCAACTGGAAGCCTGCTTGAGATA  449

seq1  CATAGGGTGACAGTATCAGAGGCCCAGGGAACAGTCTGAATTTTATTCTA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGGTGACAGTATCAGAGGCCCAGGGAACAGTCTGAATTTTATTCTA  499

seq1  TCTCCTCTCATTCCATCTGCCTTAGGTGTCTTTATTAGTCCTGGGGACTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTCATTCCATCTGCCTTAGGTGTCTTTATTAGTCCTGGGGACTG  549

seq1  AGTGGAGAGTTGTCCCCCAAAAGAGTGGAGACCATCATGAGAGCATGATG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGAGTTGTCCCCCAAAAGAGTGGAGACCATCATGAGAGCATGATG  599

seq1  CTCCAACAGTGAGCTAGCCTGGGGAAACACATTGTGTCTTTTTGTTTTGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACAGTGAGCTAGCCTGGGGAAACACATTGTGTCTTTTTGTTTTGT  649

seq1  TTTTTGTTTTGTTGTTGTTGTTGTTGTTGTTTTTTTTTTTGAGACAGGTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTGTTGTTGTTGTTGTTGTTGTTTTTTTTTTTGAGACAGGTT  699

seq1  TTCTCTGTATAGTCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTATAGTCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTG  749

seq1  GCCTCGAACTCAGAAATCAGCTTGCCTCTGCCTCTGCCTCCCAAGTGCTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCGAACTCAGAAATCAGCTTGCCTCTGCCTCTGCCTCCCAAGTGCTG  799

seq1  GGATTAAAGGCCTGTGCCACCACTGCCCAGCTTAACACATTGTGTCTTAC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAAAGGCCTGTGCCACCACTGCCCAGCTTAACACATTGTGTCTTAC  849

seq1  CCAGTGAGCTAGCCTGGGGAAACACATTGTGTCTGTCTTTCTTCCCTGAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGAGCTAGCCTGGGGAAACACATTGTGTCTGTCTTTCTTCCCTGAC  899

seq1  AGAACAAGCAGGCTGCCCATGACTGCTTCCCTGCCAGACAACATCTGTGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAGCAGGCTGCCCATGACTGCTTCCCTGCCAGACAACATCTGTGA  949

seq1  GAAAAGGATGGTGAGAATTC  964
      ||||||||||||||||||||
seq2  GAAAAGGATGGTGAGAATTC  969