BAC Information

Click to search

BAC

Clone NameB6Ng01-286P06
Chromosome12 (Build37)
Map Location 22,825,093 - 22,826,186
singlet/doubletsinglet
Overlap geneEG668662
Upstream gene6030426L16Rik, LOC434693, EG668645, EG668646, LOC100043416, LOC668650, EG668496, LOC668653, EG432637, LOC668656, EG629133, EG668660
Downstream geneLOC668664, 2410018L13Rik, LOC77114, EG668669, EG668670, LOC668680, LOC100042895, LOC100043435
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286P06.bB6Ng01-286P06.g
ACCGA085011GA085012
length1,2131,098
definitionB6Ng01-286P06.b B6Ng01-286P06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatcttttggtggtct
aaaaagacggtgtcttttgccttgcagaaactttggagtttcattaggtc
ccatttgtcaattcttgatcttacagcacaagccattgctgttctgttca
ggaatttttcccctgtgcccatatcttcaaggcttttccccactttctcc
tctataagtttcagtgtctctggttttatgtgaagttccttgatccactt
agatttgaccttagtacaaggagataagtatggatcgattcgcattcttc
tacatgataacaaccagttgtgccagcatcaattgttgaaaatgctgtcc
atcttccactggatggttttagctcccttgtcgaagatcaagtggatcct
ttttatctgtcctagacactattatatccagtttttccaaaaacgaagat
gtgatccaaataatgtgcacagggatataatttctcacaaaaatgtgatc
caaataatgtgcatggggatataatttctccccttctttgtttttaaaga
aggtataatttttaaagttttagaataccttgtctttgagaattataaaa
tatctcagtaacatgtgtaacattaaattgttgacaaaacatcccaaatc
tttgggctgttatagccagttttaatttgatttagaacaccaagcaagca
aaaaataaatcaacacaggcaatgactaactatacttttagttgcttttc
ttgttaaagtagttgtaattagaaagactaaagaggtatcacatcatatg
tgcttattttaattttttttaaatcaaaaatgagtatccatttgtaatat
ttgattaagtatagtccccgagaattagccaccaatggtgtggaacaggg
tagaaacctgaggacaactgagagcaaatcttacaatatggcatgcacat
gattattaatatttaagtactaaatattattttaagtaactatttgatga
atgtaaaggaatggagattaattgggccaaatattttggtataagatcct
aagtctaacctgggaatataaagctgagcgtgccatgtgcctataaggag
agtccctttgtca
gaattcctagtgtctgatgccctgtggggggctttctttgtgaaaagctt
acacattgttttcctgaggctttttgatttgcttggaaaactaactctag
cagcctgagggttgggcataatccccccagacagcagtggggagccaggc
actttgcctccaaactttcccttttctgttagtgcttaaaaaacagggtt
acattctggttctgtttgttccagtactcctctcctctctctcctgacct
ctcccactcagcttgggcttcacagccaatgctgatctcactggctgact
ctgcattgcattttggtgagtcccacttactagtgccaagaagtaaacgc
agaagcagctagctcctgtcctggtcaaagtttcctaggggctcccagcc
tccccagggtcatgccctgaaccctcccctgagtagaacccctgagtgtg
gcaaagaaggcccctgcatgggccagacctgtagaaatgtctggttaggc
aggctctctgggtccctctgagtaattagctggagacgggagtccagaaa
ggacgagagcaagggatttgacagcagggttgccagctgatcaatgtggt
ctttgttccttgttccaaaaaagatgacacagtgatctagcctggagctt
ttaggaacaagcagcatccctggaagatgctgctcactactgtgaagcag
gaagagcactgatgggaagcaggagtaacctccatccttcatgtctcagg
ggactcatagcccatataagcaggctgctcacttgtctgaagtctgatcc
tacagatcctgtcctggctagttttatgtcaacttaacacaagctagagt
catctgagaggagaaaatctagatttagaaaaatgcttccaataagatcc
agctgtaaaggcattttcttaattgaagaaattaaggcaatttcatatta
gattatgggagggcccagccaattgagggtgctgtcatctctgggcctgg
tggttctgggttctataagaaagcaggctgagcaagtcaggagagcaacc
aataactagcccctcttcttcttcatgactctgcatcagctctgcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_22825093_22826186
seq2: B6Ng01-286P06.g_68_1165 (reverse)

seq1  GAGGCAGGAGCTGATGCAGAGTTCATGAAGGAG-AGA-GTGCTAGTTATT  48
      |||||| |||||||||||||| |||||||| || ||| | ||||||||||
seq2  GAGGCA-GAGCTGATGCAGAG-TCATGAAGAAGAAGAGGGGCTAGTTATT  48

seq1  GGTTTGCTCCTCCTGGCTTGCTCAGCCTGCTTTCTTATAG-ACCCAGGAC  97
      || ||||| |||||| |||||||||||||||||||||||| |||||| ||
seq2  GG-TTGCT-CTCCTGACTTGCTCAGCCTGCTTTCTTATAGAACCCAGAAC  96

seq1  CACCA-GCCCAGAGATGACAGCACCCTCAATTGGCTGGGCCCTCCCAT-A  145
      ||||| |||||||||||||||||||||||||||||||||||||||||| |
seq2  CACCAGGCCCAGAGATGACAGCACCCTCAATTGGCTGGGCCCTCCCATAA  146

seq1  TCTAATTATGAAATTGCCTTAATTTCTTC-ATTAAGAAAATGCC-TTACA  193
      ||||| ||||||||||||||||||||||| |||||||||||||| |||||
seq2  TCTAA-TATGAAATTGCCTTAATTTCTTCAATTAAGAAAATGCCTTTACA  195

seq1  GCTGGATCTTA-TGGAAGCATTTTTCTAAATCTAGA-TTTCTCCTCTCAG  241
      ||||||||||| |||||||||||||||||||||||| |||||||||||||
seq2  GCTGGATCTTATTGGAAGCATTTTTCTAAATCTAGATTTTCTCCTCTCAG  245

seq1  ATGACTCTAGCTTGTGTTAAGTTGACATAAAACTAGCCAGGACAGGATCT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCTAGCTTGTGTTAAGTTGACATAAAACTAGCCAGGACAGGATCT  295

seq1  GTAGGATCAGACTTCAGACAAGTGAGCAGCCTGCTTATATGGGCTATGAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGATCAGACTTCAGACAAGTGAGCAGCCTGCTTATATGGGCTATGAG  345

seq1  TCCCCTGAGACATGAAGGATGGAGGTTACTCCTGCTTCCCATCAGTGCTC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGAGACATGAAGGATGGAGGTTACTCCTGCTTCCCATCAGTGCTC  395

seq1  TTCCTGCTTCACAGTAGTGAGCAGCATCTTCCAGGGATGCTGCTTGTTCC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCTTCACAGTAGTGAGCAGCATCTTCCAGGGATGCTGCTTGTTCC  445

seq1  TAAAAGCTCCAGGCTAGATCACTGTGTCATCTTTTTTGGAACAAGGAACA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCTCCAGGCTAGATCACTGTGTCATCTTTTTTGGAACAAGGAACA  495

seq1  AAGACCACATTGATCAGCTGGCAACCCTGCTGTCAAATCCCTTGCTCTCG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCACATTGATCAGCTGGCAACCCTGCTGTCAAATCCCTTGCTCTCG  545

seq1  TCCTTTCTGGACTCCCGTCTCCAGCTAATTACTCAGAGGGACCCAGAGAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTGGACTCCCGTCTCCAGCTAATTACTCAGAGGGACCCAGAGAG  595

seq1  CCTGCCTAACCAGACATTTCTACAGGTCTGGCCCATGCAGGGGCCTTCTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTAACCAGACATTTCTACAGGTCTGGCCCATGCAGGGGCCTTCTT  645

seq1  TGCCACACTCAGGGGTTCTACTCAGGGGAGGGTTCAGGGCATGACCCTGG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACACTCAGGGGTTCTACTCAGGGGAGGGTTCAGGGCATGACCCTGG  695

seq1  GGAGGCTGGGAGCCCCTAGGAAACTTTGACCAGGACAGGAGCTAGCTGCT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTGGGAGCCCCTAGGAAACTTTGACCAGGACAGGAGCTAGCTGCT  745

seq1  TCTGCGTTTACTTCTTGGCACTAGTAAGTGGGACTCACCAAAATGCAATG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCGTTTACTTCTTGGCACTAGTAAGTGGGACTCACCAAAATGCAATG  795

seq1  CAGAGTCAGCCAGTGAGATCAGCATTGGCTGTGAAGCCCAAGCTGAGTGG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCAGCCAGTGAGATCAGCATTGGCTGTGAAGCCCAAGCTGAGTGG  845

seq1  GAGAGGTCAGGAGAGAGAGGAGAGGAGTACTGGAACAAACAGAACCAGAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTCAGGAGAGAGAGGAGAGGAGTACTGGAACAAACAGAACCAGAA  895

seq1  TGTAACCCTGTTTTTTAAGCACTAACAGAAAAGGGAAAGTTTGGAGGCAA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACCCTGTTTTTTAAGCACTAACAGAAAAGGGAAAGTTTGGAGGCAA  945

seq1  AGTGCCTGGCTCCCCACTGCTGTCTGGGGGGATTATGCCCAACCCTCAGG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTGGCTCCCCACTGCTGTCTGGGGGGATTATGCCCAACCCTCAGG  995

seq1  CTGCTAGAGTTAGTTTTCCAAGCAAATCAAAAAGCCTCAGGAAAACAATG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAGAGTTAGTTTTCCAAGCAAATCAAAAAGCCTCAGGAAAACAATG  1045

seq1  TGTAAGCTTTTCACAAAGAAAGCCCCCCACAGGGCATCAGACACTAGGAA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCTTTTCACAAAGAAAGCCCCCCACAGGGCATCAGACACTAGGAA  1095

seq1  TTC  1094
      |||
seq2  TTC  1098