BAC Information

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BAC

Clone NameB6Ng01-290I12
Chromosome12 (Build37)
Map Location 15,501,157 - 15,502,211
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043256, Map1lc3-ps7, LOC668492, LOC100042426
Downstream geneLOC217409, Trib2, LOC100043268, EG432636, LOC100043273
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290I12.bB6Ng01-290I12.g
ACCGA087652GA087653
length1,0551,175
definitionB6Ng01-290I12.b B6Ng01-290I12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctaagtaccttatctctatgtctcctgatggatggtagcatta
tagagaagtctgtaaataccagatttctttatctgcttatggtttagtga
attctgcctctctaagtgatggggctgagtatagggtattctcagagttc
acccttttgaatatgtcatcatttggaatcataaagcagtgtgcctttca
tagtaacactaacgtaggagctatccatgcttcttgcagccttgtggctt
acctctttttactgtgtgctaacttctgtatgatgggatagttcagatct
ctatggtacttataattgtttttttttttaagaatatggctaattagaac
catgaaacaaagcttaaaacaagatacttattctctttcaaagtctatag
gtggagcctggagttaggaagtctgtttgcagagttggtcctcgaaggag
gatcagcttctagtgagctggacattgtatatcatcagtcccctttgatt
cacagacacagcattcagagctctggctctgccacagtgtaccactatct
cctgtattgtttctcccctcactaagcaggatctcatcttaactcattgc
atctgcaagaaacaacatctcatgcttgaatttttaaaaggatatggaat
tttggaatagttacttttcaatgtattagagttataggggagggttttgc
cttataccacagagctgcatgcttatataacacagagaacagatttatta
ggatttacttgatcacacaggattcttgatcagaggtaacgtgttggaaa
atctaggtcaagctctctgagagcccctgcacatatgtagcagatgtgca
gcttggtcttcatgtggttccagaacaactgggaatgggggttatcccaa
aagcagttgcctgtatatgggctatgttgttttagctcagctgccttctc
tgggccttagtgggagaggaagtgcctaacagagacttgagtgccagggt
gtgggggatacctcatgggggacttaaggactcagagagaaggagggggt
tgggg
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaagatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatccgtctggtggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gaatactactcagctattaaaaagaatgaatttatgaagttcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgttaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagccaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atgggaggagctagagaaagtagcccaaggagctaaagggatctgcaacc
ctatagtggaacacattatgaactaccagtaccccggagctcttgactct
agctgcataatatatccaaagatggcctagtcgggccaatcacttgaaag
agaagctcatttgcacttgcacttatatgctcaagtacaaggaactatca
gccctaaatggcgcagatgtggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_15501157_15502211
seq2: B6Ng01-290I12.b_42_1096 (reverse)

seq1  CCCCATCCCCCTCCCTTCTTCTCTGAGTCCTTAAAGTCCCCATG-GGTAT  49
      ||||| |||||| ||||| |||||||||||||||   ||||||| |||||
seq2  CCCCAACCCCCT-CCTTC-TCTCTGAGTCCTTAAGTCCCCCATGAGGTAT  48

seq1  -CCCCACACCCTGGCACTTCAAGTCTCTGTTAGGCACTTCCTCTCCCACT  98
       |||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCCCCACACCCTGGCAC-TCAAGTCTCTGTTAGGCACTTCCTCTCCCACT  97

seq1  AAGG-CCAGAGAAGGCAGCTGAGCTAAAACAACATAGCCCATATACAGGC  147
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCCAGAGAAGGCAGCTGAGCTAAAACAACATAGCCCATATACAGGC  147

seq1  AACTGCTTTTGGGATAACCCCCATT-CCAGTTGTTCTGGAACCACATGAA  196
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AACTGCTTTTGGGATAACCCCCATTCCCAGTTGTTCTGGAACCACATGAA  197

seq1  GACCAAGCTGCACATCTGCTACATATGTGCAGGGGCTCTCAGAGAGCTTG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGCTGCACATCTGCTACATATGTGCAGGGGCTCTCAGAGAGCTTG  247

seq1  ACCTAGATTTTCCAACACGTTACCTCTGATCAAGAATCCTGTGTGATCAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGATTTTCCAACACGTTACCTCTGATCAAGAATCCTGTGTGATCAA  297

seq1  GTAAATCCTAATAAATCTGTTCTCTGTGTTATATAAGCATGCAGCTCTGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATCCTAATAAATCTGTTCTCTGTGTTATATAAGCATGCAGCTCTGT  347

seq1  GGTATAAGGCAAAACCCTCCCCTATAACTCTAATACATTGAAAAGTAACT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAAGGCAAAACCCTCCCCTATAACTCTAATACATTGAAAAGTAACT  397

seq1  ATTCCAAAATTCCATATCCTTTTAAAAATTCAAGCATGAGATGTTGTTTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAAAATTCCATATCCTTTTAAAAATTCAAGCATGAGATGTTGTTTC  447

seq1  TTGCAGATGCAATGAGTTAAGATGAGATCCTGCTTAGTGAGGGGAGAAAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGATGCAATGAGTTAAGATGAGATCCTGCTTAGTGAGGGGAGAAAC  497

seq1  AATACAGGAGATAGTGGTACACTGTGGCAGAGCCAGAGCTCTGAATGCTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGGAGATAGTGGTACACTGTGGCAGAGCCAGAGCTCTGAATGCTG  547

seq1  TGTCTGTGAATCAAAGGGGACTGATGATATACAATGTCCAGCTCACTAGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTGAATCAAAGGGGACTGATGATATACAATGTCCAGCTCACTAGA  597

seq1  AGCTGATCCTCCTTCGAGGACCAACTCTGCAAACAGACTTCCTAACTCCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATCCTCCTTCGAGGACCAACTCTGCAAACAGACTTCCTAACTCCA  647

seq1  GGCTCCACCTATAGACTTTGAAAGAGAATAAGTATCTTGTTTTAAGCTTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCACCTATAGACTTTGAAAGAGAATAAGTATCTTGTTTTAAGCTTT  697

seq1  GTTTCATGGTTCTAATTAGCCATATTCTTAAAAAAAAAAAACAATTATAA  746
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTTTCATGGTTCTAATTAGCCATATTCTT-AAAAAAAAAAACAATTATAA  746

seq1  GTACCATAGAGATCTGAACTATCCCATCATACAGAAGTTAGCACACAGTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATAGAGATCTGAACTATCCCATCATACAGAAGTTAGCACACAGTA  796

seq1  AAAAGAGGTAAGCCACAAGGCTGCAAGAAGCATGGATAGCTCCTACGTTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGGTAAGCCACAAGGCTGCAAGAAGCATGGATAGCTCCTACGTTA  846

seq1  GTGTTACTATGAAAGGCACACTGCTTTATGATTCCAAATGATGACATATT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTACTATGAAAGGCACACTGCTTTATGATTCCAAATGATGACATATT  896

seq1  CAAAAGGGTGAACTCTGAGAATACCCTATACTCAGCCCCATCACTTAGAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGGTGAACTCTGAGAATACCCTATACTCAGCCCCATCACTTAGAG  946

seq1  AGGCAGAATTCACTAAACCATAAGCAGATAAAGAAATCTGGTATTTACAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAATTCACTAAACCATAAGCAGATAAAGAAATCTGGTATTTACAG  996

seq1  ACTTCTCTATAATGCTACCATCCATCAGGAGACATAGAGATAAGGTACTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCTATAATGCTACCATCCATCAGGAGACATAGAGATAAGGTACTT  1046

seq1  AGAGAATTC  1055
      |||||||||
seq2  AGAGAATTC  1055