BAC Information

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BAC

Clone NameB6Ng01-290L04
Chromosome12 (Build37)
Map Location 93,455,240 - 93,456,415
singlet/doubletsinglet
Overlap genenone
Upstream gene4930534B04Rik, Tshr, Gtf2a1, Ston2, EG666955, LOC100039631, Sel1l, LOC100039367, EG432681, LOC667589, LOC100039387, LOC100039425
Downstream geneLOC628116
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290L04.bB6Ng01-290L04.g
ACCGA087776GA087777
length1,1791,184
definitionB6Ng01-290L04.b B6Ng01-290L04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaggtctctagagggaggagcaggaaggaggagtaggagttca
cttggcacatgaggttagcctgggctatctgggaccctgcatgaaacaac
cactaccaccgtcaccatcaccaccatctccatcatcatcaccatcacca
ccactaccacaacaacaaagaaatcagtttgtggcttattaaaatttctt
tgaggcagcagtagatggcaggcaggcctgcatttctattggttatgagg
aggattgttgtgtcaaagtcacatagcaattgtgaagaaagtacctgctt
tgtgttatgttaggcaaagagaaaccagtagtaaataaaggttttaatgg
cccctgcatttagaatgctttccttatttcctaattacccaacacttttt
cttatactattctagttgaaaccatttcactgattatagcctttttgata
tttcagtgcctgctgtaaggaaacttttattaggcagctttaaatctagc
ttgttcaacacttactacttattgagtcagaaaccagcagacagtagagc
tttaggctttaaagcaagagtaaacaattttgtcttgttgccttgttaag
aacaggagttctgtctcgccattatagaatgagtatctctaatcttatct
tcagagaggtcgtctaaattcttgatttaatttgatttgctagacattgc
taactacctttttttctgtcactgttgttcaattgtattttcttttaaat
tttgagattaaaatatagttatgccatttccccgtccctcttctccctcc
aaaccgttcaatatatcctacctcgttctttcaaactcatgatctcattt
ttcattaattattctctttaaatgtctctctgtgtgttcctgtgtgctca
cacacttgtgatggtgtccatgcacacgtatgtatgcatttgtgaaggtc
agaaattgatgtcaggtgtctttctcagtttctcctccaacttgggtttt
ggagacagatctctcagtgaagccgacttttaccatttgggctgcactgg
gtgaatcagcaagcctcctcagatcaacagcactgactttgctgggtcaa
gactcaggtccttactgccttgcgtgggggttagcattgaacctactgag
ctatatcttagtcccaactccaattctgt
gaattcatgggacctcatgaaactgaaaagcttctgaaaggcaaaggacg
ctgtcatagggataaaacacaagcctaaccatagattgggaaaggatctt
caccaaccctatatctgacagagagttaatatccaaaatttataaagaat
taaaaaagctatacaccaacaacccaaataacccaattaaaaatggggta
cagagctaaacaaagaattctcagcagaggactctcaaatagccaagaag
catttaaagaaatattcaatgtctttagtcatcagggaaatgcaaatcaa
gacaattctgatcattaagatcaaagtctcaagtgatagcacagggtggc
aaggatgtgggcaaggagaacacttctcaaaacaaccttgcaaatttggt
agtttcttagaaaactgagagtaattctaccttaagacccaggtataaaa
ctggtaggcatagagcaaaaagattccctactctaccacagggacactcg
ctcaaatatgttcatagcagctttatttgtaataacccgaaactggaaac
aatctagatgtccctcaactgaaaaatgaataaagaaactattttacatc
tacacagtggaatactatttagccattaaaaacaaagacaacatgaattt
tgcaggcaaatggatggaacttaatatcatgctgagtgaggcaactgaga
cccaaaaggacgtgcatgatatgtactcactaataagtagatattagcaa
taaagtacaggatacctggactacaatctacatgccccccccccccccaa
aaaaaaaaacaaacaagcaaggaatgttaaagcaataatgattgaatctc
acttaggagaataaaatagttctaggagacaatgtggggggagagggcac
tgggaaagaaaatgggggtgggttcaggatcacggggtggggaaagacag
aagacaggggcccaagggctaaaggattgaatggaaatctgagctggaga
gggtagggaggtagggagcatctagaagacattccagagcttcatctctc
atgtccattgatagagcatctggtagcaagcaatgtgtttcatggaaacc
tggctatatgggagccagttttctagcaatgcatggcactggacattcag
aggtgagcaagattcacactttgtgttaacatcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_93455240_93456415
seq2: B6Ng01-290L04.b_42_1220

seq1  GAATTCTCAGGTCTCTAGAGGGAGGAGCAGGAAGGAGGAGTAGGAGTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGGTCTCTAGAGGGAGGAGCAGGAAGGAGGAGTAGGAGTTCA  50

seq1  CTTGGCACATGAGGTTAGCCTGGGCTATCTGGGACCCTGCATGAAACAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCACATGAGGTTAGCCTGGGCTATCTGGGACCCTGCATGAAACAAC  100

seq1  CACTACCACCGTCACCATCACCACCATCTCCATCATCATCACCATCACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACCACCGTCACCATCACCACCATCTCCATCATCATCACCATCACCA  150

seq1  CCACTACCACAACAACAAAGAAATCAGTTTGTGGCTTATTAAAATTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTACCACAACAACAAAGAAATCAGTTTGTGGCTTATTAAAATTTCTT  200

seq1  TGAGGCAGCAGTAGATGGCAGGCAGGCCTGCATTTCTATTGGTTATGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAGCAGTAGATGGCAGGCAGGCCTGCATTTCTATTGGTTATGAGG  250

seq1  AGGATTGTTGTGTCAAAGTCACATAGCAATTGTGAAGAAAGTACCTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGTTGTGTCAAAGTCACATAGCAATTGTGAAGAAAGTACCTGCTT  300

seq1  TGTGTTATGTTAGGCAAAGAGAAACCAGTAGTAAATAAAGGTTTTAATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTATGTTAGGCAAAGAGAAACCAGTAGTAAATAAAGGTTTTAATGG  350

seq1  CCCCTGCATTTAGAATGCTTTCCTTATTTCCTAATTACCCAACACTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCATTTAGAATGCTTTCCTTATTTCCTAATTACCCAACACTTTTT  400

seq1  CTTATACTATTCTAGTTGAAACCATTTCACTGATTATAGCCTTTTTGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATACTATTCTAGTTGAAACCATTTCACTGATTATAGCCTTTTTGATA  450

seq1  TTTCAGTGCCTGCTGTAAGGAAACTTTTATTAGGCAGCTTTAAATCTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTGCCTGCTGTAAGGAAACTTTTATTAGGCAGCTTTAAATCTAGC  500

seq1  TTGTTCAACACTTACTACTTATTGAGTCAGAAACCAGCAGACAGTAGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAACACTTACTACTTATTGAGTCAGAAACCAGCAGACAGTAGAGC  550

seq1  TTTAGGCTTTAAAGCAAGAGTAAACAATTTTGTCTTGTTGCCTTGTTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCTTTAAAGCAAGAGTAAACAATTTTGTCTTGTTGCCTTGTTAAG  600

seq1  AACAGGAGTTCTGTCTCGCCATTATAGAATGAGTATCTCTAATCTTATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGAGTTCTGTCTCGCCATTATAGAATGAGTATCTCTAATCTTATCT  650

seq1  TCAGAGAGGTCGTCTAAATTCTTGATTTAATTTGATTTGCTAGACATTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAGGTCGTCTAAATTCTTGATTTAATTTGATTTGCTAGACATTGC  700

seq1  TAACTACCTTTTTTTCTGTCACTGTTGTTCAATTGTATTTTCTTTTAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTACCTTTTTTTCTGTCACTGTTGTTCAATTGTATTTTCTTTTAAAT  750

seq1  TTTGAGATTAAAATATAGTTATGCCATTTCCCCGTCCCTCTTCTCCCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGATTAAAATATAGTTATGCCATTTCCCCGTCCCTCTTCTCCCTCC  800

seq1  AAACCGTTCAATATATCCTACCTCGTTCTTTCAAACTCATGATCTCATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCGTTCAATATATCCTACCTCGTTCTTTCAAACTCATGATCTCATTT  850

seq1  TTCATTAATTATTCTCTTTAAATGTCTCTCTGTGTGTTCCTGTGTGCTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAATTATTCTCTTTAAATGTCTCTCTGTGTGTTCCTGTGTGCTCA  900

seq1  CACACTTGTGATGGTGTCCATGCACACGTATGTATGCATTTGTGAAGGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTGTGATGGTGTCCATGCACACGTATGTATGCATTTGTGAAGGTC  950

seq1  AGAAATTGATGTCAGGTGTCTTTCTCAGTTTCT-CTCCAACTT-GGTTTT  998
      ||||||||||||||||||||||||||||||||| ||||||||| ||||||
seq2  AGAAATTGATGTCAGGTGTCTTTCTCAGTTTCTCCTCCAACTTGGGTTTT  1000

seq1  TGAGACAGAATCTCTCAGTGAAGCCGACTTTTACCAATTTGGCTGCACT-  1047
       ||||||| ||||||||||||||||||||||||||| || ||||||||| 
seq2  GGAGACAG-ATCTCTCAGTGAAGCCGACTTTTACCATTTGGGCTGCACTG  1049

seq1  GGTGAATCAGCAAGCCTCCTCAGATCAACAGCACTGACTTTTGCTGGGGT  1097
      |||||||||||||||||||||||||||||||||||||| |||||||||  
seq2  GGTGAATCAGCAAGCCTCCTCAGATCAACAGCACTGAC-TTTGCTGGGTC  1098

seq1  CAGACTCAGGTCC-TACTG-CTTGCGTGGTGGTTAGCATTTGACCTACTG  1145
       |||||||||||| ||||| ||||||||| ||||||||||  ||||||||
seq2  AAGACTCAGGTCCTTACTGCCTTGCGTGGGGGTTAGCATTGAACCTACTG  1148

seq1  AGCTATATCCTTAGCCCCAAACTC--ATTCTGT  1176
      |||||||| ||||| ||| |||||  |||||||
seq2  AGCTATAT-CTTAGTCCC-AACTCCAATTCTGT  1179