BAC Information

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BAC

Clone NameB6Ng01-292B09
Chromosome12 (Build37)
Map Location 65,433,081 - 65,433,651
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435302
Downstream geneEG623046, LOC623123, LOC217645, LOC217647, Gm527, Klhl28, A430041B07Rik, Prpf39, Fkbp3, Fancm, C79407, Wdr20b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292B09.bB6Ng01-292B09.g
ACCGA088812GA088813
length1,1991,003
definitionB6Ng01-292B09.b B6Ng01-292B09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttgaaccacttagacttgagctttgtacaagaagataagaaca
gatcaattcacattcttctacatgttaaacgccagttgtgccagcacttt
gttgaaaatgctgtctcttttccactggatggttttagctcccttgtcaa
agatcaagtgatcataggggtgtgggttcatttctgggtcttcagttcta
ttccattgatctacctgtctgtccctataccagtaccatgcagtttttaa
tcacaattgcaccatagtacagcttgagatcaggcatgttgattccaaca
caagttcttctattgttgagaatagtttgtactatacaaggttttttgtt
attccagatgaatttgcaaattgccctttctaactcggtgaagaattgag
ttgaaattttgattgagattgcattgattctatagattgcttttggaaag
ataaccatttttactatattgatcctgccaatccatgagcatgagagatc
ttttcatcttttgagatctttgatttctttcttcagaaacttaaagttct
catcatcatgagaagtgagtttagatctgagtcttgcttttctgttgtga
tggactatccaggacttgttatggtgagagaattgggttctgatgatgcc
atgtaggcttggtttctgttgcttctgttcttatgcttgcctcccaccat
ctgataatctttagtgctccctgccttccctatatctgactggagcctgt
ccttcctgtaatcctggttgagtcagaactcctcagagtccaactgtctc
tgtgatcctgtgattccaggatcctgtgatcctaaaactctgtgtatgtc
agagttcctgagattcaaactacctctgaaacattgagatcctggtgtga
ctaagctcctgggatcctgggatcttaagatcctgggcatgctagaatgc
ctgggagtggagactcctcttgaggttgtgggactggctgctgtcaagtt
gcgcctcagatccttaattcagactctatcaggattctttaggagtaaaa
tacagttattttaaattttaaaaaattctttattattaatttttttacag
ttcaagaaattaatcctaacccttactgacaaccctccacggtcccaatc
gatgcccttcctatgactgtttatcacagagatgtcctccactgtggct

gaattcactttaataaacacaatatgctcatgaactaatttaatacaggt
tccttagtatagtaggtaacactccagtctctcataatttatacttgcat
gatgttgtgcagcattgacccctgagatgaaaacattccattttgcagag
aagaacatttaatacagaaagtaaataacccaaaatcgtttcaggaagat
cctaaaactgactacattctctaggttcctccctccaacatttacagaag
caatcatgattgctgagcctcgctctcagaccagctgagctgctcagaag
aggcttctaaaataaagaccagctaagcatctgaaagacagctgaactgt
ctggaaaaattgctcaggctctctgagccaccagaaaagaatacctttaa
aactgttgatctgcctgcaggttgtgtgtgcggcttccaggtttctagct
gtcatcctttccggaatgggctacagtaatactgccctttttgagccatt
ttgctcctgtaactaatccttctcatatactcctggaagtaactacaatg
aaacttattgtttcattatgttggcctttggtgacctccatactttgatc
tgtcatggattccctatgtggagtgaggagacagttacacacagcttctc
aggaatagtgtcatagagtgcttggtgaggaataacaggagcaaaatatc
aaaattctctgtttacatagttaaatcattgattttgtgtaagagcagga
gccttgccatatgcagtataaaatattacagttcataacacacactggcc
tggaacctgagctgatatgtttcagacagcattgatgctgtgtggaatga
ggtatttgtagcacagagagaacatgctgtgtgatcagaatcaaaggctc
agtcaataaaacacatttgaactctgccagaaaaaccctcagggtttctt
agatgttagactttgaattgactttatggttgttgtatgctcagaaacct
ttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_65433081_65433651
seq2: B6Ng01-292B09.g_63_633 (reverse)

seq1  ACATAATGAAACAATAAGTTTCATTGTAGTTACTTCCAGGAGTATATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATGAAACAATAAGTTTCATTGTAGTTACTTCCAGGAGTATATGAG  50

seq1  AAGGATTAGTTACAGGAGCAAAATGGCTCAAAAAGGGCAGTATTACTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTAGTTACAGGAGCAAAATGGCTCAAAAAGGGCAGTATTACTGTA  100

seq1  GCCCATTCCGGAAAGGATGACAGCTAGAAACCTGGAAGCCGCACACACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATTCCGGAAAGGATGACAGCTAGAAACCTGGAAGCCGCACACACAA  150

seq1  CCTGCAGGCAGATCAACAGTTTTAAAGGTATTCTTTTCTGGTGGCTCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGGCAGATCAACAGTTTTAAAGGTATTCTTTTCTGGTGGCTCAGA  200

seq1  GAGCCTGAGCAATTTTTCCAGACAGTTCAGCTGTCTTTCAGATGCTTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGAGCAATTTTTCCAGACAGTTCAGCTGTCTTTCAGATGCTTAGC  250

seq1  TGGTCTTTATTTTAGAAGCCTCTTCTGAGCAGCTCAGCTGGTCTGAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTTATTTTAGAAGCCTCTTCTGAGCAGCTCAGCTGGTCTGAGAGC  300

seq1  GAGGCTCAGCAATCATGATTGCTTCTGTAAATGTTGGAGGGAGGAACCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCAGCAATCATGATTGCTTCTGTAAATGTTGGAGGGAGGAACCTA  350

seq1  GAGAATGTAGTCAGTTTTAGGATCTTCCTGAAACGATTTTGGGTTATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGTAGTCAGTTTTAGGATCTTCCTGAAACGATTTTGGGTTATTTA  400

seq1  CTTTCTGTATTAAATGTTCTTCTCTGCAAAATGGAATGTTTTCATCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTATTAAATGTTCTTCTCTGCAAAATGGAATGTTTTCATCTCAG  450

seq1  GGGTCAATGCTGCACAACATCATGCAAGTATAAATTATGAGAGACTGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAATGCTGCACAACATCATGCAAGTATAAATTATGAGAGACTGGAG  500

seq1  TGTTACCTACTATACTAAGGAACCTGTATTAAATTAGTTCATGAGCATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACCTACTATACTAAGGAACCTGTATTAAATTAGTTCATGAGCATAT  550

seq1  TGTGTTTATTAAAGTGAATTC  571
      |||||||||||||||||||||
seq2  TGTGTTTATTAAAGTGAATTC  571


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