BAC Information

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BAC

Clone NameB6Ng01-293P10
Chromosome12 (Build37)
Map Location 27,776,329 - 27,777,436
singlet/doubletsinglet
Overlap genenone
Upstream geneRnf144, Rsad2, Tyki, LOC668731, 1700020D12Rik
Downstream geneSox11, LOC100043009, LOC669327
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293P10.bB6Ng01-293P10.g
ACCGA090216GA090217
length6761,107
definitionB6Ng01-293P10.b B6Ng01-293P10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaaattcttaaacaaatggatggatctagaggatatcatctt
gagtgaggtaacccaatcacaaaagaacacatgtgatatgcactcactga
taagtggatattagcccagaagctcagaatcctcttagaagtgggagcaa
aatgctcttagaaggagttacagagacaaatttcagagcagagactgaag
gaacagccatccagagactgccccacttggggatccttcccataaacaac
caccaaacccagacactatggcagatgccaacaagagcgtgctgacagta
gcctgatatagttgtctcctgagagcttttgccagtgcctgccaaataca
gaagtggatgctcacagtcatccattggacagagcacaagtttcccaatg
aaggaactagagatagtacccagggagctgaaggggtctgaagccccata
ggaggaacatcaatatgaactaaccagtactcccaagagctccttggaac
taaaccaccaatcaaagaaaatacatggtgggacttgtggctctagctgt
atatgtagctgaggatagcctagtcagtcatcaatgggaggagaggccct
aggtcctgtgaaagttctatgtcccagtataggggaaggccagacctggg
aatgggagtgggtttattggggattt
gaattctatgtactgtgcactcagtaaatcattttcttgaggtataagac
ccagccttgcccccccccccccaatttctgtgatgattaccagactctcc
cgttaggatttaaccatttgatccccaagttcctatgttgaagcctaaag
tgaccatcagaagacatgtcctgtgacaggaacacccttgttgaatgagg
ctacccagcagtgggaccacaatccaacagaattgtgtgtccttgttgat
aaggaaatggacactgtgggtgcaagctctcctaagaaaggccaggagat
accacaaagtcaagcagaggcagcctgcgtccttgggatcccagtgtcca
gagctgaggaataaggtccttactctgttgcactgtgttcagacagaatc
tgaggggagagttgtggcacctactactggggattggtcacatgaaggga
cctcagttaagtttgtgggaggaaactcaagtgagtatgagcttatagta
aagatcacactgagctcaggatagggaagaagagatgagtaacccagtgc
tggccaagctgaatacccatggctaagccacgccctgctttcaggctcac
tctcctcttaagggaaaataaaggctactctaaaacttgatatttggaaa
gagttaagcttgtgaggaagcagcagagtacaactgtgcaccccagttag
actcagccattttttataccttaccacattggaatgaacgctctcttttc
ctcatatataagtatgtattatgtatatcaatgtttatagaaacacacat
aggtattgcgatatattttaaaccacctagaaatagacgttatctatctt
aatgattctcttatgtcttactttatgctttacataatcgcatcccggct
acaacaacaatatttatgtaatacatttatctaaactatcatttttattg
caattctagcaaccgaactgatgtttttgtctttgtcatttttcctgtct
ggggcctcaatatagcatttgtttgtatttttgtctcttaatcctttttt
tttcagttcagaagattacattgaccgcccttgactttatgaacctgaca
ttcagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_27776329_27777436
seq2: B6Ng01-293P10.g_67_1173 (reverse)

seq1  CTCTGAATTGTCAGTGTCATAAAAGTCAAAGGCGG-CCATGTAAATCTTC  49
      ||||||| ||||||  |||| |||||||| ||||| | |||| |||||||
seq2  CTCTGAA-TGTCAGGTTCAT-AAAGTCAAGGGCGGTCAATGT-AATCTTC  47

seq1  TGAACTGAAAAAAAA--GATTAAAGAGAC-AAAATACAAACAAATGCTAT  96
      |||||||||||||||  |||| ||||||| ||||||||||||||||||||
seq2  TGAACTGAAAAAAAAAGGATT-AAGAGACAAAAATACAAACAAATGCTAT  96

seq1  A-TGAGGCCCCAGACAGGAAAAATGACAAAGACAAAAACATCAGTTCGGT  145
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGGCCCCAGACAGGAAAAATGACAAAGACAAAAACATCAGTTCGGT  146

seq1  TGCTAGAATTGCAATAAAAATGATAGTTTAGATAAATGTATTACATAAAT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAATTGCAATAAAAATGATAGTTTAGATAAATGTATTACATAAAT  196

seq1  ATTGTTTGTTGTAGCCGGGATGCGATTATGTAAAGCATAAAGTAAGACAT  245
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTG-TTGTTGTAGCCGGGATGCGATTATGTAAAGCATAAAGTAAGACAT  245

seq1  AAGAGAATCATTAAGATAGATAACGTCTATTTCTAGGTGGTTTAAAATAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAATCATTAAGATAGATAACGTCTATTTCTAGGTGGTTTAAAATAT  295

seq1  ATCGCAATACCTATGTGTGTTTCTATAAACATTGATATACATAATACATA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCAATACCTATGTGTGTTTCTATAAACATTGATATACATAATACATA  345

seq1  CTTATATATGAGGAAAAGAGAGCGTTCATTCCAATGTGGTAAGGTATAAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATATGAGGAAAAGAGAGCGTTCATTCCAATGTGGTAAGGTATAAA  395

seq1  AAATGGCTGAGTCTAACTGGGGTGCACAGTTGTACTCTGCTGCTTCCTCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCTGAGTCTAACTGGGGTGCACAGTTGTACTCTGCTGCTTCCTCA  445

seq1  CAAGCTTAACTCTTTCCAAATATCAAGTTTTAGAGTAGCCTTTATTTTCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTAACTCTTTCCAAATATCAAGTTTTAGAGTAGCCTTTATTTTCC  495

seq1  CTTAAGAGGAGAGTGAGCCTGAAAGCAGGGCGTGGCTTAGCCATGGGTAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGAGGAGAGTGAGCCTGAAAGCAGGGCGTGGCTTAGCCATGGGTAT  545

seq1  TCAGCTTGGCCAGCACTGGGTTACTCATCTCTTCTTCCCTATCCTGAGCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTGGCCAGCACTGGGTTACTCATCTCTTCTTCCCTATCCTGAGCT  595

seq1  CAGTGTGATCTTTACTATAAGCTCATACTCACTTGAGTTTCCTCCCACAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGATCTTTACTATAAGCTCATACTCACTTGAGTTTCCTCCCACAA  645

seq1  ACTTAACTGAGGTCCCTTCATGTGACCAATCCCCAGTAGTAGGTGCCACA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACTGAGGTCCCTTCATGTGACCAATCCCCAGTAGTAGGTGCCACA  695

seq1  ACTCTCCCCTCAGATTCTGTCTGAACACAGTGCAACAGAGTAAGGACCTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCCCTCAGATTCTGTCTGAACACAGTGCAACAGAGTAAGGACCTT  745

seq1  ATTCCTCAGCTCTGGACACTGGGATCCCAAGGACGCAGGCTGCCTCTGCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCAGCTCTGGACACTGGGATCCCAAGGACGCAGGCTGCCTCTGCT  795

seq1  TGACTTTGTGGTATCTCCTGGCCTTTCTTAGGAGAGCTTGCACCCACAGT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTGTGGTATCTCCTGGCCTTTCTTAGGAGAGCTTGCACCCACAGT  845

seq1  GTCCATTTCCTTATCAACAAGGACACACAATTCTGTTGGATTGTGGTCCC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTTCCTTATCAACAAGGACACACAATTCTGTTGGATTGTGGTCCC  895

seq1  ACTGCTGGGTAGCCTCATTCAACAAGGGTGTTCCTGTCACAGGACATGTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGGGTAGCCTCATTCAACAAGGGTGTTCCTGTCACAGGACATGTC  945

seq1  TTCTGATGGTCACTTTAGGCTTCAACATAGGAACTTGGGGATCAAATGGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATGGTCACTTTAGGCTTCAACATAGGAACTTGGGGATCAAATGGT  995

seq1  TAAATCCTAACGGGAGAGTCTGGTAATCATCACAGAAATTGGGGGGGGGG  1045
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAAATCCTAACGGGAGAGTCTGGTAATCATCACAGAAATT-GGGGGGGGG  1044

seq1  GGGGCAAGGCTGGGTCTTATACCTCAAGAAAATGATTTACTGAGTGCACA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAAGGCTGGGTCTTATACCTCAAGAAAATGATTTACTGAGTGCACA  1094

seq1  GTACATAGAATTC  1108
      |||||||||||||
seq2  GTACATAGAATTC  1107