BAC Information

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BAC

Clone NameB6Ng01-300G21
Chromosome12 (Build37)
Map Location 15,102,326 - 15,252,973
singlet/doubletdoublet
Overlap genenone
Upstream geneAW125753, LOC100043256, Map1lc3-ps7, LOC668492, LOC100042426
Downstream geneLOC217409, Trib2, LOC100043268, EG432636, LOC100043273
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300G21.bB6Ng01-300G21.g
ACCGA095010GA095011
length1,158527
definitionB6Ng01-300G21.b B6Ng01-300G21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,102,326 - 15,103,464)(15,252,442 - 15,252,973)
sequence
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagtctaccttcttgagttctttatatatattggatattagtcccc
tatctgatttaggataggtaaagatcctctcccaatctgttggtggcctt
tttgtcttattgatggtgtcttttgccttgcagaagctttgcaattttat
gaggtcccatttgtcgattcttcatcttacagcacaagccattgctcttc
tattgaggaatttttcccctgtacccatatttcagaggcttttccttact
ttctcctctataagtttcagtgtctctggttttatgtggagttccttaat
ccacttatatttgaccttagtacaaggagataggaatggatcaattcaca
ttcttctacatgataaccgccagttgtgccagcaccaattgttgaaaatg
ctgtcttttttccactagatggtttttgctcccttgtcaaagatcaagtg
gaccataggtgtgtgtgttcatttctagacagaatcacctgtgtgtgacc
tggatggggcggaaggattcagagaatgtggcagggtggacaagagacct
tggaaaaccatgaagcttggtgagcatgtgggaaaagccaaaccaagtac
caaacccacaaaacctcactgcttacccatttttaatctcaattgtcaag
gtcttacccatttttaatctcaattgtcaaggtctcaattgtcatgacat
ctgtagccttgttaatgggccatgtaaccagacataatgatttcctggat
ggcgctctgaatgtaatgcaccttcagataattctgctgagtggttgtaa
taatcaagaccaattctaaacctctacatcatactagaagctctgcatta
attattaatcttcatcacatcaaacctgtagtgaagccatactttactta
aggcacagagagtatgtggtctcccgaggttaagcatttaccctgtctca
gatagatatgggaggagcggtctcattcagagtaccacaaacactatgcc
attttaattcccttatacattccttgtgataatttaacacataatctcca
gaaaggtccgcaaagtatcagatgggaagcagaaataatgctgcctttca
gtgaacac

caggagctagccatgcactggcatcatttcttattaacagtgcaaggatc
tgaggaggctccgggttttgaaataagtccattcgcatagaattgacaca
ttagaagctggtacagaccagaagaatagattgtccactatcctacaaac
tgttgagtgacagagctgaaaataaaaggtacttctgctgacagtctttc
tgttgcatgcttctaaggtgttgtctctttgcaaaatgacataagacaga
tgtaaatgtccaactgtcagcctaaatacagactactcagcagtgtccct
aggagaaataatctaataggctgaattgcagagggggcaaaatagacatc
ctcaagaggcaatgactgctgtgttatcccttttcctttattatgacaaa
cacattaatgacaaatatgagggtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtcaatagcgatgagtgtttaaaaagctcattatcatttttttg
aatagcattaaaactctttttccctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_15102326_15103464
seq2: B6Ng01-300G21.b_81_1206

seq1  AATGGGGTTATTTGATTTTCTGGAGTCTACCTTCTTGAGTTCTTTATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGTTATTTGATTTTCTGGAGTCTACCTTCTTGAGTTCTTTATATA  50

seq1  TATTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTCTCC  100

seq1  CAATCTGTTGGTGGCCTTTTTGTCTTATTGATGGTGTCTTTTGCCTTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTGTTGGTGGCCTTTTTGTCTTATTGATGGTGTCTTTTGCCTTGCA  150

seq1  GAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGATTCTTCATCTTACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGATTCTTCATCTTACAG  200

seq1  CACAAGCCATTGCTCTTCTATTGAGGAATTTTTCCCCTGTACCCATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCCATTGCTCTTCTATTGAGGAATTTTTCCCCTGTACCCATATTT  250

seq1  CAGAGGCTTTTCCTTACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCTTTTCCTTACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTT  300

seq1  TATGTGGAGTTCCTTAATCCACTTATATTTGACCTTAGTACAAGGAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGAGTTCCTTAATCCACTTATATTTGACCTTAGTACAAGGAGATA  350

seq1  GGAATGGATCAATTCACATTCTTCTACATGATAACCGCCAGTTGTGCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGGATCAATTCACATTCTTCTACATGATAACCGCCAGTTGTGCCAG  400

seq1  CACCAATTGTTGAAAATGCTGTCTTTTTTCCACTAGATGGTTTTTGCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAATTGTTGAAAATGCTGTCTTTTTTCCACTAGATGGTTTTTGCTCC  450

seq1  CTTGTCAAAGATCAAGTGGACCATAGGTGTGTGTGTTCATTTCTAGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCAAAGATCAAGTGGACCATAGGTGTGTGTGTTCATTTCTAGACAG  500

seq1  AATCACCTGTGTGTGACCTGGATGGGGCGGAAGGATTCAGAGAATGTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACCTGTGTGTGACCTGGATGGGGCGGAAGGATTCAGAGAATGTGGC  550

seq1  AGGGTGGACAAGAGACCTTGGAAAACCATGAAGCTTGGTGAGCATGTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGACAAGAGACCTTGGAAAACCATGAAGCTTGGTGAGCATGTGGG  600

seq1  AAAAGCCAAACCAAGTACCAAACCCACAAAACCTCACTGCTTACCCATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCAAACCAAGTACCAAACCCACAAAACCTCACTGCTTACCCATTT  650

seq1  TTAATCTCAATTGTCAAGGTCTTACCCATTTTTAATCTCAATTGTCAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTCAATTGTCAAGGTCTTACCCATTTTTAATCTCAATTGTCAAGG  700

seq1  TCTCAATTGTCATGACATCTGTAGCCTTGTTAATGGGCCATGTAACCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATTGTCATGACATCTGTAGCCTTGTTAATGGGCCATGTAACCAGA  750

seq1  CATAATGATTTCCTGGATGGCGCTCTGAATGTAATGCACCTTCAGATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATGATTTCCTGGATGGCGCTCTGAATGTAATGCACCTTCAGATAAT  800

seq1  TCTGCTGAGTGGTTGTAATAATCAAGACCAATTCTAAACCTCTACATCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGAGTGGTTGTAATAATCAAGACCAATTCTAAACCTCTACATCAT  850

seq1  ACTAGAAGCTCTGCATTAATTATTAATCTTCATCACATCAAACCTGTAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAAGCTCTGCATTAATTATTAATCTTCATCACATCAAACCTGTAGT  900

seq1  GAAGCCATACTTTACTTAAGGCACAGAGAGTATGTGGTCTCCCCGAGGTT  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAAGCCATACTTTACTTAAGGCACAGAGAGTATGTGGTCT-CCCGAGGTT  949

seq1  AAGCATTTACCCTGTCTCAGATAGATATGGGAAGGAGCGGTCTCATTCAG  1000
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAGCATTTACCCTGTCTCAGATAGATATGGG-AGGAGCGGTCTCATTCAG  998

seq1  AGTAACCACAAACACTATGCCAATTTTAATTCCCTATAACATTCCCTTGT  1050
      ||| ||||||||||||||||| |||||||||||||   ||||| ||||||
seq2  AGT-ACCACAAACACTATGCC-ATTTTAATTCCCTTATACATT-CCTTGT  1045

seq1  GATTAAATTTAACACATAATTCTCAGAAAGGTCGGCAAAGGTATCAGGAA  1100
      |||  |||||||||||||||   |||||||||| ||||| |||||||  |
seq2  GAT--AATTTAACACATAATCTCCAGAAAGGTCCGCAAA-GTATCAG--A  1090

seq1  TGGGAAGCAGAAAATAAATGCTGCCTTTCCAGTGAACAC  1139
      |||||||||||||   |||||||||||| ||||||||||
seq2  TGGGAAGCAGAAA--TAATGCTGCCTTT-CAGTGAACAC  1126


seq1: chr12_15252442_15252973
seq2: B6Ng01-300G21.g_66_598 (reverse)

seq1  TAAGGGAAAATGAGTTTTACTGCTCTTC-ATAAATTGCTAATGAGCTTTT  49
      |||||||||| |||||||| |||| ||| | ||| || ||||||||||||
seq2  TAAGGGAAAAAGAGTTTTAATGCTATTCAAAAAAATGATAATGAGCTTTT  50

seq1  TAAACAATCATCGCTCTAGACACACACACACACACACACACACACACACA  99
      |||||| |||||||| | ||||||||||||||||||||||||||||||||
seq2  TAAACACTCATCGCTATTGACACACACACACACACACACACACACACACA  100

seq1  CACACCCTCATATTTGTCATTAATGTGTTTGTCATAATAAAGGAAAAGGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCTCATATTTGTCATTAATGTGTTTGTCATAATAAAGGAAAAGGG  150

seq1  ATAACACAGCAGTCATTGCCTCTTGAGGATGTCTATTTTGCCCCCTCTGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACAGCAGTCATTGCCTCTTGAGGATGTCTATTTTGCCCCCTCTGC  200

seq1  AATTCAGCCTATTAGATTATTTCTCCTAGGGACACTGCTGAGTAGTCTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGCCTATTAGATTATTTCTCCTAGGGACACTGCTGAGTAGTCTGT  250

seq1  ATTTAGGCTGACAGTTGGACATTTACATCTGTCTTATGTCATTTTGCAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGCTGACAGTTGGACATTTACATCTGTCTTATGTCATTTTGCAAA  300

seq1  GAGACAACACCTTAGAAGCATGCAACAGAAAGACTGTCAGCAGAAGTACC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAACACCTTAGAAGCATGCAACAGAAAGACTGTCAGCAGAAGTACC  350

seq1  TTTTATTTTCAGCTCTGTCACTCAACAGTTTGTAGGATAGTGGACAATCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTCAGCTCTGTCACTCAACAGTTTGTAGGATAGTGGACAATCT  400

seq1  ATTCTTCTGGTCTGTACCAGCTTCTAATGTGTCAATTCTATGCGAATGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTGGTCTGTACCAGCTTCTAATGTGTCAATTCTATGCGAATGGA  450

seq1  CTTATTTCAAAACCCGGAGCCTCCTCAGATCCTTGCACTGTTAATAAGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTCAAAACCCGGAGCCTCCTCAGATCCTTGCACTGTTAATAAGAA  500

seq1  ATGATGCCAGTGCATGGCTAGCTCCTGGAATTC  532
      |||||||||||||||||||||||||||||||||
seq2  ATGATGCCAGTGCATGGCTAGCTCCTGGAATTC  533


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