BAC Information

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BAC

Clone NameB6Ng01-303E17
Chromosome12 (Build37)
Map Location 15,181,248 - 15,182,367
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043256, Map1lc3-ps7, LOC668492, LOC100042426
Downstream geneLOC217409, Trib2, LOC100043268, EG432636, LOC100043273
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303E17.bB6Ng01-303E17.g
ACCGA097131GA097132
length1,1251,174
definitionB6Ng01-303E17.b B6Ng01-303E17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcctgtccctgtcatgtttgcttgtcaatctctccaaatggca
tcctgagagcctacagataactctgcaaagctgttactatttgtataata
aatgttagtataaatttggtaattaaatgatttaatttattaaattaaat
tgcttgagtgctattggctagcaagtagcagttcattatagcctttacat
ttctacaagagtagccaaaggccagtgagaacggccagtgggttaagaga
actaatgtcaagcctgatgactggaattcaaccatgtaattgtatggtgg
aaggagagaaatggaatgaacaccttgtcctctaaaacacacacacacac
acacacacacacacacacacacacataatgaataaagtataataaaatta
aagacaaaataaaagtagccaaaatgggacatagaacttattgtaattta
gtagtttagaataaaagaaaaattacaacatttcctccactaaacagaaa
ggcacagttattgatgcatctaattctatcttaattgagagggggaacag
gcatactacaggcagaagcccaaatggcttgtgtgggtttcacagcaaat
gagcagtaagtgattttctgactttgctcctgccactgggaagcagctga
ctgacgtctccttcatcttacactgcactttacagtggccactgtcaggc
tttccaaggaacgaacaaattgccttctgtttatatccccatcaatcaga
cagagtaataggctatttcctcaaaccttagaaatgtgtccagctcaatc
ggaggcccagtagttggaaggtttccaaagtcagaatgaaggaggtagga
ttcaaagatcagagttcataaaataaaatgttcctatttgaaaattttaa
tcatgttctcctttcctactggaaaagcgtagttctttgacagaacagcg
tgaacctcatcagagagcagataaagcatccctggcctttattccaattt
gagtacagctgcatcaatccaaatgttcctccccctgcccccgcaaccct
gattaatacatccaaatataataacaataaaaagttctagttttctgtat
aatcaccttgttcttttacatatca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagagataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactagcatatccggggatccatcccataatc
agctttccaaatgctgacatcattgcatacactagcaagattatgctgaa
aggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaa
catagaagtggatgctcacagtcggctattggatggatcacatggccccc
aaatgaagaagctagagaaagtaccaaagaagctaaagggaatctgcacc
ctataggtggaacaacattatgaactaacagtacccggagcttcttggac
tctagctgcatatgcatcaaaaagatggcctagttcgtcattcacttgga
aaaggagagtccaatgaccgcacgtttatatgtcccagatacaggggaaa
accgcccaaggggcccctttacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_15181248_15182367
seq2: B6Ng01-303E17.b_44_1168 (reverse)

seq1  TGATATGTAAA--GACAAGGTGA-TATACAG-AAACTAGAA-TTTTTATT  45
      |||||||||||   ||||||||| ||||||| ||||||||| ||||||||
seq2  TGATATGTAAAAGAACAAGGTGATTATACAGAAAACTAGAACTTTTTATT  50

seq1  GTTATTATTATTTGATGTATTAATCAGGGTTGCGGGGGCAGGGGGGAGGA  95
      ||||||||  || ||||||||||||||||||||||||||| |||||||||
seq2  GTTATTATATTTGGATGTATTAATCAGGGTTGCGGGGGCA-GGGGGAGGA  99

seq1  ACATTTTGGATTTGATGCAGCTGTTACTCAAA-TGGAATAAA-GCCA-GG  142
      ||| |||||| |||||||||||| |||||||| ||||||||| |||| ||
seq2  ACA-TTTGGA-TTGATGCAGCTG-TACTCAAATTGGAATAAAGGCCAGGG  146

seq1  ATGCTTTATCTGCTCTCTGATGGGTTCCACGCTGTTCTGTCAAAGAACTA  192
      |||||||||||||||||||||| | | |||||||||||||||||||||||
seq2  ATGCTTTATCTGCTCTCTGATGAGGTTCACGCTGTTCTGTCAAAGAACTA  196

seq1  CGCTTTTCCAGTAGG-AAGGAGAACATGATTAAAATTTTCAAATAGGAAC  241
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CGCTTTTCCAGTAGGAAAGGAGAACATGATTAAAATTTTCAAATAGGAAC  246

seq1  ATTTTATTTTATGAACTCTGATCTTTGAATCCTACCTCCTTCATTCTGAC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTTATGAACTCTGATCTTTGAATCCTACCTCCTTCATTCTGAC  296

seq1  TTTGGAAACCTTCCAACTACTGGGCCTCCGATTGAGCTGGACACATTTCT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAACCTTCCAACTACTGGGCCTCCGATTGAGCTGGACACATTTCT  346

seq1  AAGGTTTGAGGAAATAGCCTATTACTCTGTCTGATTGATGGGGATATAAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTGAGGAAATAGCCTATTACTCTGTCTGATTGATGGGGATATAAA  396

seq1  CAGAAGGCAATTTGTTCGTTCCTTGGAAAGCCTGACAGTGGCCACTGTAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGCAATTTGTTCGTTCCTTGGAAAGCCTGACAGTGGCCACTGTAA  446

seq1  AGTGCAGTGTAAGATGAAGGAGACGTCAGTCAGCTGCTTCCCAGTGGCAG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAGTGTAAGATGAAGGAGACGTCAGTCAGCTGCTTCCCAGTGGCAG  496

seq1  GAGCAAAGTCAGAAAATCACTTACTGCTCATTTGCTGTGAAACCCACACA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAAGTCAGAAAATCACTTACTGCTCATTTGCTGTGAAACCCACACA  546

seq1  AGCCATTTGGGCTTCTGCCTGTAGTATGCCTGTTCCCCCTCTCAATTAAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTTGGGCTTCTGCCTGTAGTATGCCTGTTCCCCCTCTCAATTAAG  596

seq1  ATAGAATTAGATGCATCAATAACTGTGCCTTTCTGTTTAGTGGAGGAAAT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATTAGATGCATCAATAACTGTGCCTTTCTGTTTAGTGGAGGAAAT  646

seq1  GTTGTAATTTTTCTTTTATTCTAAACTACTAAATTACAATAAGTTCTATG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAATTTTTCTTTTATTCTAAACTACTAAATTACAATAAGTTCTATG  696

seq1  TCCCATTTTGGCTACTTTTATTTTGTCTTTAATTTTATTATACTTTATTC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTTGGCTACTTTTATTTTGTCTTTAATTTTATTATACTTTATTC  746

seq1  ATTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTAGAG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTAGAG  796

seq1  GACAAGGTGTTCATTCCATTTCTCTCCTTCCACCATACAATTACATGGTT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGTGTTCATTCCATTTCTCTCCTTCCACCATACAATTACATGGTT  846

seq1  GAATTCCAGTCATCAGGCTTGACATTAGTTCTCTTAACCCACTGGCCGTT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTCATCAGGCTTGACATTAGTTCTCTTAACCCACTGGCCGTT  896

seq1  CTCACTGGCCTTTGGCTACTCTTGTAGAAATGTAAAGGCTATAATGAACT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGGCCTTTGGCTACTCTTGTAGAAATGTAAAGGCTATAATGAACT  946

seq1  GCTACTTGCTAGCCAATAGCACTCAAGCAATTTAATTTAATAAATTAAAT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTGCTAGCCAATAGCACTCAAGCAATTTAATTTAATAAATTAAAT  996

seq1  CATTTAATTACCAAATTTATACTAACATTTATTATACAAATAGTAACAGC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATTACCAAATTTATACTAACATTTATTATACAAATAGTAACAGC  1046

seq1  TTTGCAGAGTTATCTGTAGGCTCTCAGGATGCCATTTGGAGAGATTGACA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGAGTTATCTGTAGGCTCTCAGGATGCCATTTGGAGAGATTGACA  1096

seq1  AGCAAACATGACAGGGACAGGATGAATTC  1120
      |||||||||||||||||||||||||||||
seq2  AGCAAACATGACAGGGACAGGATGAATTC  1125