BAC Information

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BAC

Clone NameB6Ng01-306M11
Chromosome12 (Build37)
Map Location 64,725,944 - 64,849,737
singlet/doubletdoublet
Overlap genenone
Upstream gene1700047L15Rik, Tspyl-ps, EG665741, EG382606
Downstream geneLOC435302, EG623046
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306M11.bB6Ng01-306M11.g
ACCGA099722GA099723
length1,1041,117
definitionB6Ng01-306M11.b B6Ng01-306M11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,725,944 - 64,727,051)(64,848,618 - 64,849,737)
sequence
gaattcatatcaatggtatggtataagaaaaaaacaagcattttttttaa
tgcaacttgcatctattctttgatttttctgagtagtttttacttgttat
cctcattggcctctttactgactttaccatgtaacctgatttttagtttt
aaggtaatgttaacccccccaagactatctgacatttatgtgtaaacgat
cagcttattacatacattctcttagtgtgttaatatttttaccctagtgg
ttttttggttgacacaggcaacaaaccaacaattattcatccatatatat
atatatatatatatatatatatatatatatatgatcttaaggcaatggat
aaagacatgaaggcttacataaaggtacgctggctgaatgtgtactctgg
aaatggacaaagtcgtgacaaaattccccgactcgtggaaaattggcaaa
gatttcctcatacttgtcaggctcaaaattaacgagttttttctattggc
caaaatataagtggctacagacaattgttcaatttgtacgtatctaacaa
taaggtctcacctgcattgactgcttaaacctgagctgaacaaaggcaat
agctatgctaagcagaccgatgaaagcccaagaggcctcaagtctttgca
aagaaccagaggaaactacaaaattctgagaactctgctaatagtctaat
aactgtgctcaaagaatcacatccaaatcacatgtcaaatgattggccct
aaacacataactacaaacaacacatacaacctaaacctgctctatttatg
tatttaggaatatatatactcatatacacatatataaatatataggtttg
taaaagcagagaaaacaggccatattttgagagagataacagaggattta
aaggaggatttgtactgtggaacagaagggtaaatgatgtaaatatgtta
ttaatctcaaaagatacattttaaaatcactagtactacaaatgaaattt
aagatttctaataaaccgggacttaataagatcactcagggttatcatgg
tggaacttatgactaaccaatgccctttggaattaaaaaatagtggaaaa
atat
gaattcatttgatggaaaaaaaaaaaacaatgcctcagtatggacagatg
gaattactatataaagggatagattgaccagtcttatcattatacatcat
aacaattcccacaaaacgaaaacaaacaaaaaataatagacatgttatta
tatacatacgaatactttatatttgtaagcatatacatatgtgcacatac
atatgcataactattaaaaacaagtgtcctagtttacccaatttacaaag
ctgagttgcattatataaaaattaatagctgtattgttttataaatatta
actttaattttccatagtacataagtgatgaagtaataatatataacact
gtataacttttcttcttttttttttaactatggcactgtataattatctt
tcaggatgatattggcaggtgtccagagtctactcaaggccatgttcttg
tgctgtaatacacaatttaaattttctaaagtaatgctacaccaaatcag
tattaagtttaaaataatttcaccccagagaacctaaaatccttctacag
taagtgaattagcaagtgaggttcatgatcttcactcttttttccattca
attatcaaaatttctcatatacccacaggcaatagacaaaataagctcct
agtggcccatgtaattagaaagcaagtaatactacccaagggaacagatt
tgtgaattcttgtgtcttctccataaaactttcaggaggtaaaagcaaaa
tctctactatactccaggttcttaaaaatcttcaggagatcaacttatct
acaaagcagaagacaaagtaatttaacctgttttctgctgtgaacttttc
taagattaaaccagaggactagaggaaagcagtttcttttgctaatttaa
cagatattatttgattaaagttatagcttgctgtgtgtcaaagggcccat
agcagcaaagatgtgattttatatactcacatactcttagatcatggtac
tctctgtagaagtaggatatacatttttttttttttttgcctggtgcatt
gtgttggtgtcatttcttttttatattattatttcaattttattagttat
ttagctcaatttacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_64725944_64727051
seq2: B6Ng01-306M11.b_48_1151

seq1  GAATTCATATCAATGGTATGGTATAAGAAAAAAACAAGCATTTTTTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATCAATGGTATGGTATAAGAAAAAAACAAGCATTTTTTTTAA  50

seq1  TGCAACTTGCATCTATTCTTTGATTTTTCTGAGTAGTTTTTACTTGTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACTTGCATCTATTCTTTGATTTTTCTGAGTAGTTTTTACTTGTTAT  100

seq1  CCTCATTGGCCTCTTTACTGACTTTACCATGTAACCTGATTTTTAGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTGGCCTCTTTACTGACTTTACCATGTAACCTGATTTTTAGTTTT  150

seq1  AAGGTAATGTTAACCCCCCCAAGACTATCTGACATTTATGTGTAAACGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAATGTTAACCCCCCCAAGACTATCTGACATTTATGTGTAAACGAT  200

seq1  CAGCTTATTACATACATTCTCTTAGTGTGTTAATATTTTTACCCTAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTATTACATACATTCTCTTAGTGTGTTAATATTTTTACCCTAGTGG  250

seq1  TTTTTTGGTTGACACAGGCAACAAACCAACAATTATTCATCCATATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGTTGACACAGGCAACAAACCAACAATTATTCATCCATATATAT  300

seq1  ATATATATATATATATATATATATATATATATGATCTTAAGGCAATGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATGATCTTAAGGCAATGGAT  350

seq1  AAAGACATGAAGGCTTACATAAAGGTACGCTGGCTGAATGTGTACTCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACATGAAGGCTTACATAAAGGTACGCTGGCTGAATGTGTACTCTGG  400

seq1  AAATGGACAAAGTCGTGACAAAATTCCCCGACTCGTGGAAAATTGGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGACAAAGTCGTGACAAAATTCCCCGACTCGTGGAAAATTGGCAAA  450

seq1  GATTTCCTCATACTTGTCAGGCTCAAAATTAACGAGTTTTTTCTATTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCTCATACTTGTCAGGCTCAAAATTAACGAGTTTTTTCTATTGGC  500

seq1  CAAAATATAAGTGGCTACAGACAATTGTTCAATTTGTACGTATCTAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATATAAGTGGCTACAGACAATTGTTCAATTTGTACGTATCTAACAA  550

seq1  TAAGGTCTCACCTGCATTGACTGCTTAAACCTGAGCTGAACAAAGGCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTCTCACCTGCATTGACTGCTTAAACCTGAGCTGAACAAAGGCAAT  600

seq1  AGCTATGCTAAGCAGACCGATGAAAGCCCAAGAGGCCTCAAGTCTTTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGCTAAGCAGACCGATGAAAGCCCAAGAGGCCTCAAGTCTTTGCA  650

seq1  AAGAACCAGAGGAAACTACAAAATTCTGAGAACTCTGCTAATAGTCTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCAGAGGAAACTACAAAATTCTGAGAACTCTGCTAATAGTCTAAT  700

seq1  AACTGTGCTCAAAGAATCACATCCAAATCACATGTCAAATGATTGGCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGCTCAAAGAATCACATCCAAATCACATGTCAAATGATTGGCCCT  750

seq1  AAACACATAACTACAAACAACACATACAACCTAAACCTGCTCTATTTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATAACTACAAACAACACATACAACCTAAACCTGCTCTATTTATG  800

seq1  TATTTAGGAATATATATACTCATATACACATATATAAATATATAGGTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGGAATATATATACTCATATACACATATATAAATATATAGGTTTG  850

seq1  TAAAAGCAGAGAAAACAGGCCATATTTTGAGAGAGATAACAGGAGGATTT  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TAAAAGCAGAGAAAACAGGCCATATTTTGAGAGAGATAACA-GAGGATTT  899

seq1  AAAGGAGGATTTGTACTGTGGAACAGAAGGGGTAAATGATGTAAATATGT  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAAGGAGGATTTGTACTGTGGAACAGAA-GGGTAAATGATGTAAATATGT  948

seq1  TA-TAATCTCAAAAAGATACATTTTAAAATCAACTAGTAACTACAAATGA  999
      || ||||||| |||||||||||||||||||| |||||| |||||||||||
seq2  TATTAATCTC-AAAAGATACATTTTAAAATC-ACTAGT-ACTACAAATGA  995

seq1  AATTAAAGATTTCTAATAAACC-GGACTTAAAATAAGATCACTCAGGGTT  1048
      |||| ||||||||||||||||| ||||||  |||||||||||||||||||
seq2  AATTTAAGATTTCTAATAAACCGGGACTT--AATAAGATCACTCAGGGTT  1043

seq1  ATCATGGTGGACCTAATGACATAACAATGCCCTTTGAAATT-AAAAATAG  1097
      ||||||||||| || |||||  | |||||||||||| |||| ||||||||
seq2  ATCATGGTGGAACTTATGACTAACCAATGCCCTTTGGAATTAAAAAATAG  1093

seq1  TGGAAAAATAT  1108
      |||||||||||
seq2  TGGAAAAATAT  1104

seq1: chr12_64848618_64849737
seq2: B6Ng01-306M11.g_68_1184 (reverse)

seq1  AATGTAAA-TGAGCTAAATACCTAATAAAAATTGGAAATAATAATAATAA  49
      |||||||| ||||||||||| |||||||||  | ||||||||||||   |
seq2  AATGTAAATTGAGCTAAATAACTAATAAAA--TTGAAATAATAATA--TA  46

seq1  AAAAAGAAATGACAC--ACACAATGGCACAAGGC-AAAAAAAAAAAAAAT  96
      |||||||||||||||  ||||||| |||| |||| |||||||||||||||
seq2  AAAAAGAAATGACACCAACACAAT-GCACCAGGCAAAAAAAAAAAAAAAT  95

seq1  GTATATCCTACTTCTTACAGGAGAAGTACCATGATCTAAGAGTATGTGAG  146
      |||||||||||||| |||| ||| ||||||||||||||||||||||||||
seq2  GTATATCCTACTTC-TACA-GAG-AGTACCATGATCTAAGAGTATGTGAG  142

seq1  TATATAAAATCACATCTTTGCTGCTATGGGCCCTTTGACACACAGCAAGC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAAATCACATCTTTGCTGCTATGGGCCCTTTGACACACAGCAAGC  192

seq1  TATAACTTTAATCAAATAATATCTGTTAAATTAGCAAAAGAAACTGCTTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTTTAATCAAATAATATCTGTTAAATTAGCAAAAGAAACTGCTTT  242

seq1  CCTCTAGTCCTCTGGTTTAATCTTAGAAAAGTTCACAGCAGAAAACAGGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAGTCCTCTGGTTTAATCTTAGAAAAGTTCACAGCAGAAAACAGGT  292

seq1  TAAATTACTTTGTCTTCTGCTTTGTAGATAAGTTGATCTCCTGAAGATTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTACTTTGTCTTCTGCTTTGTAGATAAGTTGATCTCCTGAAGATTT  342

seq1  TTAAGAACCTGGAGTATAGTAGAGATTTTGCTTTTACCTCCTGAAAGTTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAACCTGGAGTATAGTAGAGATTTTGCTTTTACCTCCTGAAAGTTT  392

seq1  TATGGAGAAGACACAAGAATTCACAAATCTGTTCCCTTGGGTAGTATTAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAGAAGACACAAGAATTCACAAATCTGTTCCCTTGGGTAGTATTAC  442

seq1  TTGCTTTCTAATTACATGGGCCACTAGGAGCTTATTTTGTCTATTGCCTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTCTAATTACATGGGCCACTAGGAGCTTATTTTGTCTATTGCCTG  492

seq1  TGGGTATATGAGAAATTTTGATAATTGAATGGAAAAAAGAGTGAAGATCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTATATGAGAAATTTTGATAATTGAATGGAAAAAAGAGTGAAGATCA  542

seq1  TGAACCTCACTTGCTAATTCACTTACTGTAGAAGGATTTTAGGTTCTCTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTCACTTGCTAATTCACTTACTGTAGAAGGATTTTAGGTTCTCTG  592

seq1  GGGTGAAATTATTTTAAACTTAATACTGATTTGGTGTAGCATTACTTTAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAAATTATTTTAAACTTAATACTGATTTGGTGTAGCATTACTTTAG  642

seq1  AAAATTTAAATTGTGTATTACAGCACAAGAACATGGCCTTGAGTAGACTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTAAATTGTGTATTACAGCACAAGAACATGGCCTTGAGTAGACTC  692

seq1  TGGACACCTGCCAATATCATCCTGAAAGATAATTATACAGTGCCATAGTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACCTGCCAATATCATCCTGAAAGATAATTATACAGTGCCATAGTT  742

seq1  AAAAAAAAAAGAAGAAAAGTTATACAGTGTTATATATTATTACTTCATCA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAGAAGAAAAGTTATACAGTGTTATATATTATTACTTCATCA  792

seq1  CTTATGTACTATGGAAAATTAAAGTTAATATTTATAAAACAATACAGCTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTACTATGGAAAATTAAAGTTAATATTTATAAAACAATACAGCTA  842

seq1  TTAATTTTTATATAATGCAACTCAGCTTTGTAAATTGGGTAAACTAGGAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTTATATAATGCAACTCAGCTTTGTAAATTGGGTAAACTAGGAC  892

seq1  ACTTGTTTTTAATAGTTATGCATATGTATGTGCACATATGTATATGCTTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTTTTAATAGTTATGCATATGTATGTGCACATATGTATATGCTTA  942

seq1  CAAATATAAAGTATTCGTATGTATATAATAACATGTCTATTATTTTTTGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATAAAGTATTCGTATGTATATAATAACATGTCTATTATTTTTTGT  992

seq1  TTGTTTTCGTTTTGTGGGAATTGTTATGATGTATAATGATAAGACTGGTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCGTTTTGTGGGAATTGTTATGATGTATAATGATAAGACTGGTC  1042

seq1  AATCTATCCCTTTATATAGTAATTCCATCTGTCCATACTGAGGCATTG-T  1095
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AATCTATCCCTTTATATAGTAATTCCATCTGTCCATACTGAGGCATTGTT  1092

seq1  TTTTTTTTTTCCATCAAATGAATTC  1120
      |||||||||||||||||||||||||
seq2  TTTTTTTTTTCCATCAAATGAATTC  1117