BAC Information

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BAC

Clone NameB6Ng01-312N03
Chromosome12 (Build37)
Map Location 47,601,411 - 47,602,031
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664952
Downstream geneNova1, LOC100039190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312N03.bB6Ng01-312N03.g
ACCGA104195GA104196
length709623
definitionB6Ng01-312N03.b B6Ng01-312N03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataacacgtggctgagaaccatctaatcaccag
ggaaatgcaaatcaataaaaccctgagattccacctcacaccagtcagaa
tgcctaagatcaaaaactcaggtgacagcagatgctggtgacgaatggtg
gaggaaagaagggaacactccctccatttgctagtgggattgcaagctgg
gtacaactacttttgggaaatcagtttgggtgggcaccctcagaaaaatt
gggacataggttctaccagaagatccgggcaataccacttcctggagcat
atacctagaagatgctcaacttgtaccaggacacttgcctcacctatgtt
catagcagcccttattttaatagcaagagccgggaagacccagaatgtcc
tcgacgaggatgggatacggaaagtgtatctttccatgggatcactccta
acattaaactgattctggattcttaacaatgatgatcggagaatctctca
gtggagatccatttcaagagccactgaatgccttctagtaagggcatagg
ccggggagtcccaatccgggaaccgtcgatacttagtaatctaaaaaaaa
aaacaacggacttttttgggttttttgtaaagagtatgatttcttggtgg
ggggggggttaccacccccaaaaacaaattcatttttttttgtaaaaaga
tggggagag
gaattcagttactgcagtgatctgcctctccattttcctcccagcccatc
atagttctgagacttatgtacaaaggaaaagagaaagaataagaaaatat
gagcgagatttaaaaatacacccaaacggactacatcccccccccgtgtg
tgtgtttatatgtgtgtgtgcatgtatgtgtgtgtatgtatgtgtgtgct
tgtccccgcatgtgtgcgtgcattcctgtttgtgtgttcatacatgcacg
catgtgtttcattttgtttgagtgccttttaaaactctggcttcttccgg
gaaccccagtggttgaattaaggaaaaagtggaagaagctggggaggaag
ataaccccgtaggaagatcagcagtcagcagtctcaactattctgaaccc
ctgagatatctcagacactaagccaccaaccagactgcatacaccagctg
atatgagacccccaacacacatacagcagaggactgctgggtctggattc
agtgagagaagatgcacctaaccctctagagacttgaagccccagagcgt
gcggaggtctggtggggtccgggcagggatggagagagacatcctcttgg
atatgggggtagggaggtatggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_47601411_47602031
seq2: B6Ng01-312N03.g_66_688

seq1  GAATTCAGTTACTGCAGTGATCTGCCTCTCCATTTTCCTCCCAGCCCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTACTGCAGTGATCTGCCTCTCCATTTTCCTCCCAGCCCATC  50

seq1  ATAGTTCTGAGACTTATGTACAAAGGAAAAGAGAAAGAATAAGAAAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCTGAGACTTATGTACAAAGGAAAAGAGAAAGAATAAGAAAATAT  100

seq1  GAGCGAGATTTAAAAATACACCCAAACGGACTACATCCCCCCCCCGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGAGATTTAAAAATACACCCAAACGGACTACATCCCCCCCCCGTGTG  150

seq1  TGTGTTTATATGTGTGTGTGCATGTATGTGTGTGTATGTATGTGTGTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTATATGTGTGTGTGCATGTATGTGTGTGTATGTATGTGTGTGCT  200

seq1  TGTCCCCGCATGTGTGCGTGCATTCCTGTTTGTGTGTTCATACATGCACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCGCATGTGTGCGTGCATTCCTGTTTGTGTGTTCATACATGCACG  250

seq1  CATGTGTTTCATTTTGTTTGAGTGCCTTTTAAAACTCTGGCTTCTTCCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTTTCATTTTGTTTGAGTGCCTTTTAAAACTCTGGCTTCTTCCGG  300

seq1  GAACCCCAGTGGTTGAATTAAGGAAAAAGTGGAAGAAGCTGGGGAGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCCAGTGGTTGAATTAAGGAAAAAGTGGAAGAAGCTGGGGAGGAAG  350

seq1  ATAACCCCGTAGGAAGATCAGCAGTCAGCAGTCTCAACTATTCTGAACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCCCGTAGGAAGATCAGCAGTCAGCAGTCTCAACTATTCTGAACCC  400

seq1  CTGAGATATCTCAGACACTAAGCCACCAACCAGACTGCATACACCAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATATCTCAGACACTAAGCCACCAACCAGACTGCATACACCAGCTG  450

seq1  ATATGAGACCCCCAACACACATACAGCAGAGGACTGCTGGGTCTGGATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGACCCCCAACACACATACAGCAGAGGACTGCTGGGTCTGGATTC  500

seq1  AGTGAGAGAAGATGCACCTAACCCTCTAGAGACTTGAAGCCCCAGAGCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGAGAAGATGCACCTAACCCTCTAGAGACTTGAAGCCCCAGAGCGT  550

seq1  GCGGAGGTCTGGTGGGGTCCGGGCAGGGATGGAGAGAGACATCCTCTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAGGTCTGGTGGGGTCCGGGCAGGGATGGAGAGAGACATCCTCTTGG  600

seq1  ATAT-GGGGTA-GGAGGTATGGG  621
      |||| |||||| |||||||||||
seq2  ATATGGGGGTAGGGAGGTATGGG  623