BAC Information

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BAC

Clone NameB6Ng01-314G23
Chromosome12 (Build37)
Map Location 94,338,634 - 94,452,611
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039425, LOC628116
Downstream gene2610022K04Rik-ps, EG633639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314G23.bB6Ng01-314G23.g
ACCGA105372GA105373
length1,1021,104
definitionB6Ng01-314G23.b B6Ng01-314G23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,451,510 - 94,452,611)(94,338,634 - 94,339,735)
sequence
gaattcttcataaattcgtcttatttcttatatctttgagttggttttgg
agaccggccatgccacttcaatagactagggcaaggtggttttaaactct
atctgtaaagcttgttgatatgccttatgcaaacacccaagagtctgtgg
cagagaaattatgatttggggtcaaaacgcttacaaatttttgacattta
tcttctgacttactgttttcaatccaattgccaagattcagtagccccta
gaaagtgtactttctgaactgagaagatagacaaagtagacactccgcct
cttccttattgtgtctcctgcttaggacaattagtctttatgatgtaagg
agctcctgagaatgactgggaagccttcctgggagagctgcttaacctgc
cttccatgctattgtgtcactgtgtaaacaggctgtcagctccaaactgg
actcagatacctgaggcttcatccttctttttattttattttaatttact
tttagtttaaaaagggaagaatttagtttggcccattctttcagtccatc
ttagtaggagaaggcatggcaggacacaacagtttgctgcatcattgcag
ccaagagaaaggtcacacaaggtctgtacttgggttccatacatgcccca
gcatgagtgatatttccatgaacattcattacagatcttcccctttgggg
caatcttctctggaaataccatcatagatgcactcatagaagtgatttac
taatatcttagacattctcaatccaattaggttaaaaaaattaacaatca
caagtaaactgctgatcgacttgctatccaaacccattttctataactta
tttgccttcttttattaaaaatggatgtttttataaagtatattctgatc
acagtttcttcttcaccaacctcactgaatccatcttaatctctgcccta
catcaaaagccacaccatttttgtctcctcattagaaaacaggttaatat
tctatttccattttattatttcatttattctttgtcctatttcttagctg
gagcctcacaaatggctctttgagtcgaaggcacagtgaactttctgaca
tg
gaattctgctgcaactccaaaagagaaatgaaatcgaacatatgtgtgtg
taagacaattgtctgcatcttttcaaatttcatcacgtagggattattac
ttgagattcgttgccactgtcattgtcacaacatcctacattattcaaac
caagtatcagtttcattagtcagcctctcctttgctgtcaaagatgcaaa
ttcaggcttgtgctgccgagagtaaatgtatcatcggaacaggaaatgtg
tcagaaggtattaaatgatatgagttatcattatgaaattaaatcaaaca
aatagatggattcttccctgtctaaaatatggaaattatttacaatttct
gagtttaagagttctttgtggttaaaaatataatttatttttgcattctt
ggcccatgaagaatagtgggtgcttatgagatcttctactaatcagccat
cgaagcatatattttgaggaaatgactgaaggaactaatgaaaatgtaag
agggactatttaacttgctgacagtacactaaggaatcaactgatcttct
aacatttacctgggagttctagaaaatatgaaataaacagatgccattct
acatttccaaacatcctctaatgagccatatttatgtcagtgtgtactca
ggaataagacatacttcaatctgctgaatgcaggtgaagagatgcagtca
ttaaccaaaattgaatcactattctcacatgtgtactatttacatacctt
cacatatttttcaagtcaaaaacacagagggacattatttcttattttaa
agataaaatttggagccctctccacagtgatgactctttccataggctaa
gcatctgataggaatattattccactaattttaaagaaaatttgaattta
ccaaaatagtagttgttctgttaaaatgaacaggaacatttgttcaagtt
attaataataaaaacatccattgaaaaatacaaatagtataaatatcatg
acttatggatgatgatacaagttctttttaacaccatagtaggaacctgt
actgaaccaatagcttgcctattttaattaacctaccccttatttattag
atga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_94451510_94452611
seq2: B6Ng01-314G23.b_46_1147 (reverse)

seq1  CATGTTAGAAAG-TCACTGTTGCTTCTGACTC-AAGAG-CATTTGTGAGG  47
      ||||| |||||| |||||||  |||| ||||| ||||| |||||||||||
seq2  CATGTCAGAAAGTTCACTGTGCCTTC-GACTCAAAGAGCCATTTGTGAGG  49

seq1  CTCCAGCTAAGAAATAGGACAAAGAATAAAATGAAATAATAAAAT-GAAA  96
      ||||||||||||||||||||||||||| ||||||||||||||||| ||||
seq2  CTCCAGCTAAGAAATAGGACAAAGAAT-AAATGAAATAATAAAATGGAAA  98

seq1  TAGAATATTAAACCTGTTTTCTAATGA-GAGACAAAAATGGTGTGGCTTT  145
      ||||||||| ||||||||||||||||| ||||||||||||||||||||||
seq2  TAGAATATT-AACCTGTTTTCTAATGAGGAGACAAAAATGGTGTGGCTTT  147

seq1  TGATGGTAGGGCAGAGATTAAGATGGATTTCAGTGAGGTTGGTGAAGAAG  195
      |||| |||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGAT-GTAGGGCAGAGATTAAGATGGA-TTCAGTGAGGTTGGTGAAGAAG  195

seq1  AAACTGTGATCAGAATATACTTTATAAAAACATCCATTTTTAATAAAAGA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTGATCAGAATATACTTTATAAAAACATCCATTTTTAATAAAAGA  245

seq1  AGGCAAATAAGTTATAGAAAATGGGTTTGGATAGCAAGTCGATCAGCAGT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAATAAGTTATAGAAAATGGGTTTGGATAGCAAGTCGATCAGCAGT  295

seq1  TTACTTGTGATTGTTAATTTTTTTAACCTAATTGGATTGAGAATGTCTAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGTGATTGTTAATTTTTTTAACCTAATTGGATTGAGAATGTCTAA  345

seq1  GATATTAGTAAATCACTTCTATGAGTGCATCTATGATGGTATTTCCAGAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAGTAAATCACTTCTATGAGTGCATCTATGATGGTATTTCCAGAG  395

seq1  AAGATTGCCCCAAAGGGGAAGATCTGTAATGAATGTTCATGGAAATATCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGCCCCAAAGGGGAAGATCTGTAATGAATGTTCATGGAAATATCA  445

seq1  CTCATGCTGGGGCATGTATGGAACCCAAGTACAGACCTTGTGTGACCTTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCTGGGGCATGTATGGAACCCAAGTACAGACCTTGTGTGACCTTT  495

seq1  CTCTTGGCTGCAATGATGCAGCAAACTGTTGTGTCCTGCCATGCCTTCTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGCTGCAATGATGCAGCAAACTGTTGTGTCCTGCCATGCCTTCTC  545

seq1  CTACTAAGATGGACTGAAAGAATGGGCCAAACTAAATTCTTCCCTTTTTA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAAGATGGACTGAAAGAATGGGCCAAACTAAATTCTTCCCTTTTTA  595

seq1  AACTAAAAGTAAATTAAAATAAAATAAAAAGAAGGATGAAGCCTCAGGTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAAGTAAATTAAAATAAAATAAAAAGAAGGATGAAGCCTCAGGTA  645

seq1  TCTGAGTCCAGTTTGGAGCTGACAGCCTGTTTACACAGTGACACAATAGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTCCAGTTTGGAGCTGACAGCCTGTTTACACAGTGACACAATAGC  695

seq1  ATGGAAGGCAGGTTAAGCAGCTCTCCCAGGAAGGCTTCCCAGTCATTCTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGGCAGGTTAAGCAGCTCTCCCAGGAAGGCTTCCCAGTCATTCTC  745

seq1  AGGAGCTCCTTACATCATAAAGACTAATTGTCCTAAGCAGGAGACACAAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTCCTTACATCATAAAGACTAATTGTCCTAAGCAGGAGACACAAT  795

seq1  AAGGAAGAGGCGGAGTGTCTACTTTGTCTATCTTCTCAGTTCAGAAAGTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGAGGCGGAGTGTCTACTTTGTCTATCTTCTCAGTTCAGAAAGTA  845

seq1  CACTTTCTAGGGGCTACTGAATCTTGGCAATTGGATTGAAAACAGTAAGT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCTAGGGGCTACTGAATCTTGGCAATTGGATTGAAAACAGTAAGT  895

seq1  CAGAAGATAAATGTCAAAAATTTGTAAGCGTTTTGACCCCAAATCATAAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGATAAATGTCAAAAATTTGTAAGCGTTTTGACCCCAAATCATAAT  945

seq1  TTCTCTGCCACAGACTCTTGGGTGTTTGCATAAGGCATATCAACAAGCTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGCCACAGACTCTTGGGTGTTTGCATAAGGCATATCAACAAGCTT  995

seq1  TACAGATAGAGTTTAAAACCACCTTGCCCTAGTCTATTGAAGTGGCATGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATAGAGTTTAAAACCACCTTGCCCTAGTCTATTGAAGTGGCATGG  1045

seq1  CCGGTCTCCAAAACCAACTCAAAGATATAAGAAATAAGACGAATTTATGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTCTCCAAAACCAACTCAAAGATATAAGAAATAAGACGAATTTATGA  1095

seq1  AGAATTC  1102
      |||||||
seq2  AGAATTC  1102

seq1: chr12_94338634_94339735
seq2: B6Ng01-314G23.g_67_1170

seq1  GAATTCTGCTGCAACTCCAAAAGAGAAATGAAATCGAACATATGTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTGCAACTCCAAAAGAGAAATGAAATCGAACATATGTGTGTG  50

seq1  TAAGACAATTGTCTGCATCTTTTCAAATTTCATCACGTAGGGATTATTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAATTGTCTGCATCTTTTCAAATTTCATCACGTAGGGATTATTAC  100

seq1  TTGAGATTCGTTGCCACTGTCATTGTCACAACATCCTACATTATTCAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATTCGTTGCCACTGTCATTGTCACAACATCCTACATTATTCAAAC  150

seq1  CAAGTATCAGTTTCATTAGTCAGCCTCTCCTTTGCTGTCAAAGATGCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATCAGTTTCATTAGTCAGCCTCTCCTTTGCTGTCAAAGATGCAAA  200

seq1  TTCAGGCTTGTGCTGCCGAGAGTAAATGTATCATCGGAACAGGAAATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCTTGTGCTGCCGAGAGTAAATGTATCATCGGAACAGGAAATGTG  250

seq1  TCAGAAGGTATTAAATGATATGAGTTATCATTATGAAATTAAATCAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGGTATTAAATGATATGAGTTATCATTATGAAATTAAATCAAACA  300

seq1  AATAGATGGATTCTTCCCTGTCTAAAATATGGAAATTATTTACAATTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATGGATTCTTCCCTGTCTAAAATATGGAAATTATTTACAATTTCT  350

seq1  GAGTTTAAGAGTTCTTTGTGGTTAAAAATATAATTTATTTTTGCATTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTAAGAGTTCTTTGTGGTTAAAAATATAATTTATTTTTGCATTCTT  400

seq1  GGCCCATGAAGAATAGTGGGTGCTTATGAGATCTTCTACTAATCAGCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCATGAAGAATAGTGGGTGCTTATGAGATCTTCTACTAATCAGCCAT  450

seq1  CGAAGCATATATTTTGAGGAAATGACTGAAGGAACTAATGAAAATGTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGCATATATTTTGAGGAAATGACTGAAGGAACTAATGAAAATGTAAG  500

seq1  AGGGACTATTTAACTTGCTGACAGTACACTAAGGAATCAACTGATCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTATTTAACTTGCTGACAGTACACTAAGGAATCAACTGATCTTCT  550

seq1  AACATTTACCTGGGAGTTCTAGAAAATATGAAATAAACAGATGCCATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTACCTGGGAGTTCTAGAAAATATGAAATAAACAGATGCCATTCT  600

seq1  ACATTTCCAAACATCCTCTAATGAGCCATATTTATGTCAGTGTGTACTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCCAAACATCCTCTAATGAGCCATATTTATGTCAGTGTGTACTCA  650

seq1  GGAATAAGACATACTTCAATCTGCTGAATGCAGGTGAAGAGATGCAGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAAGACATACTTCAATCTGCTGAATGCAGGTGAAGAGATGCAGTCA  700

seq1  TTAACCAAAATTGAATCACTATTCTCACATGTGTACTATTTACATACCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCAAAATTGAATCACTATTCTCACATGTGTACTATTTACATACCTT  750

seq1  CACATATTTTTCAAGTCAAAAACACAGAGGGACATTATTTCTTATTTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATTTTTCAAGTCAAAAACACAGAGGGACATTATTTCTTATTTTAA  800

seq1  AGATAAAATTTGGAGCCCTCTCCACAGTGATGACTCTTTCCATAGGCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAATTTGGAGCCCTCTCCACAGTGATGACTCTTTCCATAGGCTAA  850

seq1  GCATCTGATAGGAATATTATTCCACTAATTTTAAAGAAAATTTGAATTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGATAGGAATATTATTCCACTAATTTTAAAGAAAATTTGAATTTA  900

seq1  CCAAAATAGTAGTTGTTCTGTTAAAATGAACAGGAACATTTGTTCAAGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATAGTAGTTGTTCTGTTAAAATGAACAGGAACATTTGTTCAAGTT  950

seq1  ATTAATAATAAAAACAATCCATTTGAAAATACAAATAGTATAAATATCAT  1000
      ||||||||||||||| |||||||  |||||||||||||||||||||||||
seq2  ATTAATAATAAAAAC-ATCCATTGAAAAATACAAATAGTATAAATATCAT  999

seq1  GACTTATTGGATTGATGATACAAGTTCTTTTT-ACACCATAGTAG--ACC  1047
      |||||| |||| |||||||||||||||||||| ||||||||||||  |||
seq2  GACTTA-TGGA-TGATGATACAAGTTCTTTTTAACACCATAGTAGGAACC  1047

seq1  TGTACTTGAACC-ATAGCCTGCCTATTTTAATTTA-CTACCCC-TATTTA  1094
      ||||| |||||| ||||| |||||||||||||| | ||||||| ||||||
seq2  TGTAC-TGAACCAATAGCTTGCCTATTTTAATTAACCTACCCCTTATTTA  1096

seq1  TTAGATGA  1102
      ||||||||
seq2  TTAGATGA  1104