BAC Information

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BAC

Clone NameB6Ng01-315H23
Chromosome12 (Build37)
Map Location 61,501,770 - 61,502,858
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665644, EG622488
Downstream geneLOC665665, Ppia-ps12_475.1, LOC100040300, LOC665677
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315H23.bB6Ng01-315H23.g
ACCGA106134GA106135
length4301,080
definitionB6Ng01-315H23.b B6Ng01-315H23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
actgaagcagttttaaaataagaaccattcttatggtaaaagtggacgtt
tcttctccttgggatttgaagctcctatttctgggcccagctccttattc
ctctgaacctactaaaattccttgagtattttatgtaggcataaggttat
tgtgccctgtgtaaaattatccttttatcaatcaactgctgagttctctg
ctcacatatctggttgcaatccttatgctgagaatctactgtctcaatgt
tgcgtaaacattgctcctcaattatttcctggttgatcaataaagctagt
tgatcaagaaatgactaagcaggggaaagaataggtctggacttccttcc
agcctggcatagtagtgtaggagagagagaggaagtggggattaccacaa
ggagaaaatccaggagacaccatgagaaaa

gaattcatttgtgagttctgtgcaggtcagaagaggcagttttgtcaaga
cacttttacagagacaggttacaggtgaagatgaacaagtcaacgaatga
ggagccagatgataacagattgccacaggtagtctgaagccaagcagagc
tattcagtcagatgccaagaaaagcaaggttgaatgagtcagcttggaaa
ggagtttaagccagaacagttagttgagttgaaccagtcagccagagttc
agaaagaaccagaaatggtgtacttattcagcagtatcctccttgaacct
acaatttcatctggcaagtgaaagttacatttacacaaaagaaaatgaaa
cactttcatatgacaatttagcaatgtagaaaaagtgcaaaatatactcc
cccataagatatatacagatataaatgcatgagtagtacatgtgtgtgta
tgtaggtatatatgcacatatgtgtgtgtttttgtatctcaaaatcataa
aaatatattttaagaaaatgtaatcctggtgacttaactttgtaaacttg
gattattaagattataaggtaaagaaattcagataaaacagaaaaatgaa
ttttagaatataacttagtaagaaagaaaggcattgaaaagaccttacct
ttaaaaacacagtgtgcgatggtaaggtgccttaaagcttatggaagcca
aacgtggtattccataattgtaatcagtatgcaagagactgagggaacca
ggttttgtgatcatgtgtttgagatcatctgtgatgacatagccagaact
cttctcagaaatacgaaaacccaaaccaaacaaaaattaaacaacaatca
gcaacaccaaacaaatttgaagaaagaaaaaaaaatcctgaaaagcagct
gttgcattgcctttaatgatattattctatgaaaattatatattttgctt
tttattgtatatttatttattctctggggatgcaaacattcatctaatgt
atttttgagcttagctatcggacaaattcttcaggacttcatagccatcc
tactccactccaccttttcaagtccatgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_61501770_61502858
seq2: B6Ng01-315H23.g_63_1142

seq1  GAATTCATTTGTGAGTTCTGTGCAGGTCAGAAGAGGCAGTTTTGTCAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGTGAGTTCTGTGCAGGTCAGAAGAGGCAGTTTTGTCAAGA  50

seq1  CACTTTTACAGAGACAGGTTACAGGTGAAGATGAACAAGTCAACGAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTACAGAGACAGGTTACAGGTGAAGATGAACAAGTCAACGAATGA  100

seq1  GGAGCCAGATGATAACAGATTGCCACAGGTAGTCTGAAGCCAAGCAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCAGATGATAACAGATTGCCACAGGTAGTCTGAAGCCAAGCAGAGC  150

seq1  TATTCAGTCAGATGCCAAGAAAAGCAAGGTTGAATGAGTCAGCTTGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGTCAGATGCCAAGAAAAGCAAGGTTGAATGAGTCAGCTTGGAAA  200

seq1  GGAGTTTAAGCCAGAACAGTTAGTTGAGTTGAACCAGTCAGCCAGAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTAAGCCAGAACAGTTAGTTGAGTTGAACCAGTCAGCCAGAGTTC  250

seq1  AGAAAGAACCAGAAATGGTGTACTTATTCAGCAGTATCCTCCTTGAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAACCAGAAATGGTGTACTTATTCAGCAGTATCCTCCTTGAACCT  300

seq1  ACAATTTCATCTGGCAAGTGAAAGTTACATTTACACAAAAGAAAATGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTCATCTGGCAAGTGAAAGTTACATTTACACAAAAGAAAATGAAA  350

seq1  CACTTTCATATGACAATTTAGCAATGTAGAAAAAGTGCAAAATATACTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCATATGACAATTTAGCAATGTAGAAAAAGTGCAAAATATACTCC  400

seq1  CCCATAAGATATATACAGATATAAATGCATGAGTAGTACATGTGTGTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAAGATATATACAGATATAAATGCATGAGTAGTACATGTGTGTGTA  450

seq1  TGTAGGTATATATGCACATATGTGTGTGTTTTTGTATCTCAAAATCATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGTATATATGCACATATGTGTGTGTTTTTGTATCTCAAAATCATAA  500

seq1  AAATATATTTTAAGAAAATGTAATCCTGGTGACTTAACTTTGTAAACTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATTTTAAGAAAATGTAATCCTGGTGACTTAACTTTGTAAACTTG  550

seq1  GATTATTAAGATTATAAGGTAAAGAAATTCAGATAAAACAGAAAAATGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTAAGATTATAAGGTAAAGAAATTCAGATAAAACAGAAAAATGAA  600

seq1  TTTTAGAATATAACTTAGTAAGAAAGAAAGGCATTGAAAAGACCTTACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAATATAACTTAGTAAGAAAGAAAGGCATTGAAAAGACCTTACCT  650

seq1  TTAAAAACACAGTGTGCGATGGTAAGGTGCCTTAAAGCTTATGGAAGCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACACAGTGTGCGATGGTAAGGTGCCTTAAAGCTTATGGAAGCCA  700

seq1  AACGTGGTATTCCATAATTGTAATCAGTATGCAAGAGACTGAGGGAACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGGTATTCCATAATTGTAATCAGTATGCAAGAGACTGAGGGAACCA  750

seq1  GGTTTTGTGATCATGTGTTTGAGATCATCTGTGATGACATAGCCAGAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGTGATCATGTGTTTGAGATCATCTGTGATGACATAGCCAGAACT  800

seq1  CTTCTCAGAAATACGAAAACCAAAACCAAACAAAAATTAAACAAACAATC  850
      ||||||||||||||||||||| |||||||||||||||||||| |||||||
seq2  CTTCTCAGAAATACGAAAACCCAAACCAAACAAAAATTAAAC-AACAATC  849

seq1  AGCAACACCAAACAAAATTTGAAGAAAGAAAAAAAAATCCTGAAAAGCAG  900
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGCAACACCAAAC-AAATTTGAAGAAAGAAAAAAAAATCCTGAAAAGCAG  898

seq1  CTGTTGCATTGCC-TTAATGATATTATTCTAATGAAAATTAATATATTTT  949
      ||||||||||||| |||||||||||||||| ||||||||| |||||||||
seq2  CTGTTGCATTGCCTTTAATGATATTATTCT-ATGAAAATT-ATATATTTT  946

seq1  GCTTTTTAATTTGTAATATTTTATTTATTCTCTGGGGATTGCAAACATTC  999
      ||||||||  |||| ||| ||||||||||||||||||| |||||||||||
seq2  GCTTTTTA--TTGT-ATA-TTTATTTATTCTCTGGGGA-TGCAAACATTC  991

seq1  ATCTAATGTA-TTTTGAGCTTAGCTATCCGACAAATTCCTTCAGGACTCC  1048
      |||||||||| ||||||||||||||||| |||||||| |||||||||| |
seq2  ATCTAATGTATTTTTGAGCTTAGCTATCGGACAAATT-CTTCAGGACTTC  1040

seq1  ATAGCATCCCTACTCCACTCCACTTTTTCCAATTCCATGTC  1089
      |||||   ||||||||||||||| |||| ||| ||||||||
seq2  ATAGCCATCCTACTCCACTCCACCTTTT-CAAGTCCATGTC  1080


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