BAC Information

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BAC

Clone NameB6Ng01-323A12
Chromosome12 (Build37)
Map Location 7,246,079 - 7,246,629
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC238049, LOC100042118
Downstream geneLOC668380, EG668388, Apob, 1110057K04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323A12.bB6Ng01-323A12.g
ACCGA111716GA111717
length5471,179
definitionB6Ng01-323A12.b B6Ng01-323A12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
actcagcagctcttttgcattctgttcttttaattattttgaaaagctat
cagtggatgaacctagtttcataattgcccaattgaacatgtgacaacag
gggctaagctaggtaccaaagggaccaagactgtcaagatggagccccac
ttttatagagtacattcccaacagcacccagagatctgccctgacttccc
aatgagtttagattcagtccaggaaagccacaatagttctgaaacatctg
ggtgaaggaactttaggttcaacttgaaagaacagaggggatgggatcaa
atggaagatcccctcctcttgacttttgtatacatttattgggcttcagg
gaataggaacactgtgaaggggttcttctcagctcgatgagactagacaa
ggatgtattggggtgggggaggcgtgaagaagggacattgattgggatgt
taagtgaataaataaatacattaatttagaaaaaagaaggaactaacaca
tgctgtactcaagcagtggatagtatttgtggaatatttatattttt

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgcccggggcccagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcatagggctccc
aatggaggagctagagaaagtagccaaggagctaaagggatctgcaaccc
tatagtggacacattatgagctaccagtaccccggagctctgagtctagc
tgcatatatatcaaaagatgactagtcgcatcacttgaagagaggtccat
gactgcaacttatatgccagttcatggaattccatgtcgaaaggggatgg
ctggcacagacgggaattgggattcatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_7246079_7246629
seq2: B6Ng01-323A12.b_48_600 (reverse)

seq1  AAAAATATAAATATTCCACAACTACTATCCACTGC-TGAGTACAGCATGT  49
      ||||||||||||||||||||| ||||||||||||| ||||||||||||||
seq2  AAAAATATAAATATTCCACAAATACTATCCACTGCTTGAGTACAGCATGT  50

seq1  GTGAGTTCCTTCTTTTTTCT-AATTAATGTATTTATTTATTCACTTAACA  98
      || ||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTTAGTTCCTTCTTTTTTCTAAATTAATGTATTTATTTATTCACTTAACA  100

seq1  TCCCAATCAATGTCCCTTCTTCACGCCTCCCCCACCCCAATACATCCTTG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATCAATGTCCCTTCTTCACGCCTCCCCCACCCCAATACATCCTTG  150

seq1  TCTAGTCTCATCGAGCTGAGAAGAACCCCTTCACAGTGTTCCTATTCCCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTCTCATCGAGCTGAGAAGAACCCCTTCACAGTGTTCCTATTCCCT  200

seq1  GAAGCCCAATAAATGTATACAAAAGTCAAGAGGAGGGGATCTTCCATTTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCCAATAAATGTATACAAAAGTCAAGAGGAGGGGATCTTCCATTTG  250

seq1  ATCCCATCCCCTCTGTTCTTTCAAGTTGAACCTAAAGTTCCTTCACCCAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATCCCCTCTGTTCTTTCAAGTTGAACCTAAAGTTCCTTCACCCAG  300

seq1  ATGTTTCAGAACTATTGTGGCTTTCCTGGACTGAATCTAAACTCATTGGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCAGAACTATTGTGGCTTTCCTGGACTGAATCTAAACTCATTGGG  350

seq1  AAGTCAGGGCAGATCTCTGGGTGCTGTTGGGAATGTACTCTATAAAAGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGGGCAGATCTCTGGGTGCTGTTGGGAATGTACTCTATAAAAGTG  400

seq1  GGGCTCCATCTTGACAGTCTTGGTCCCTTTGGTACCTAGCTTAGCCCCTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCCATCTTGACAGTCTTGGTCCCTTTGGTACCTAGCTTAGCCCCTG  450

seq1  TTGTCACATGTTCAATTGGGCAATTATGAAACTAGGTTCATCCACTGATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACATGTTCAATTGGGCAATTATGAAACTAGGTTCATCCACTGATA  500

seq1  GCTTTTCAAAATAATTAAAAGAACAGAATGCAAAAGAGCTGCTGAGTGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCAAAATAATTAAAAGAACAGAATGCAAAAGAGCTGCTGAGTGAA  550

seq1  TTC  551
      |||
seq2  TTC  553


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