BAC Information

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BAC

Clone NameB6Ng01-326B08
Chromosome12 (Build37)
Map Location 79,515,895 - 79,517,021
singlet/doubletsinglet
Overlap geneGphn
Upstream geneFut8, LOC230765, LOC666659, EG626215
Downstream gene4921509E07Rik, Mpp5, Atp6v1d, LOC100041878, Eif2s1, Plek2, 6330442E10Rik, Plekhh1, Pigh, LOC666722, Arg2, Vti1b, Rdh11, Rdh12, Zfyve26, Rad51l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326B08.bB6Ng01-326B08.g
ACCGA113978GA113979
length1,109565
definitionB6Ng01-326B08.b B6Ng01-326B08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctatttcccagtgttctatgtacatttatttttaaagatttat
tttcattacctatgtgtatagatatgtggggtatataggaatataaacaa
tgcagatgcttaccgaattcagaagagggtgtcagtcagatctcctggat
ctctaataatgggcatttgcgagatacttgatgtgggtgctaggactaaa
cgctaaaacatctcttcaccccagcttttcttcatttgttttaaaagcta
atatacaaaaaaatatggtattttcatgatacaatgtttcggttaatcct
cttctatttcactctctagttgtctatctgccccaacccttctgccttgc
agttcatgtcacatgcactcgattgttttctgttatcctattcatcccct
tcgctttaaatctccccctctttgaaactctttctctttcgatgacctat
acttacacttactttcatgtaattatgcataattaaaatgtaagaagctg
tgaactttcagtgaagaccactgctaacatttcatatgagtgtacttaaa
atggctaaacattttcttttatgtgctcccaagttgtagggaatgttctt
tttaatgtaactaccaaacaaacaaatttaatcttataacttgttcagga
tctatctatgaaatctttaaaattctgtcaaattggttttacctaccaaa
cattatctttgttcctttccacctttatataaatataattctgctatcat
aatatttttatttcctccttttggtgctatttattgataagattctcact
gtgacttatttgtgtttcatatatcagaaattgagcagcattttattctt
aagtgttattcaactacttaaaaatcatgaggtgtgtttttaattttgta
tgcatatacttagtacctctggataagcattaagcttacatctatgtaag
tgttcagtatctgtttttttaaagcagtgatttatctaatatgtatactt
gctctttatgtttatatcggttatattttccatgtagagcagatagatat
gatatctattgacaagctgtttacttgtaagtttcataagaaaacttaaa
gaagatggg
gaattccttgatagacaatcccatgaaaaattatccaactctattctaag
aatccaaggccaggatgtcccagctaacttattttaccttttgttaaact
gcctagttgtatggaacttcctccagctaactaatcttagcttctgttaa
aaatgctaacttcaaactgcttacttctgtaaatctcccttgcagctacc
tagagagatgccagctacctagagaatgtttttgtctttaaaaaccccat
tgcatacactagcaagattttgctgaaaggacccagatatagctgtctct
tgtaagactatgcaggggcctagcaaacacagaagtgaatgctcacagtc
agctattggatggaccacagggcccccaatggaggagctagagaaagtac
ccaaggagctaaagggatctataatcttataggtggaacaacaatatgaa
ctaaccagtaaccccctggagctcgtgtctctagctgcatatgaatcaga
aaatggcctagtcggccatcagtggaaactttataagcctcagtacaggg
gaacgacagggccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_79515895_79517021
seq2: B6Ng01-326B08.b_48_1156

seq1  GAATTCTCTATTTCCCAGTGTTCTATGTACATTTATTTTTAAAGATTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATTTCCCAGTGTTCTATGTACATTTATTTTTAAAGATTTAT  50

seq1  TTTCATTACCTATGTGTATAGATATGTGGGGTATATAGGAATATAAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTACCTATGTGTATAGATATGTGGGGTATATAGGAATATAAACAA  100

seq1  TGCAGATGCTTACCGAATTCAGAAGAGGGTGTCAGTCAGATCTCCTGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATGCTTACCGAATTCAGAAGAGGGTGTCAGTCAGATCTCCTGGAT  150

seq1  CTCTAATAATGGGCATTTGCGAGATACTTGATGTGGGTGCTAGGACTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATAATGGGCATTTGCGAGATACTTGATGTGGGTGCTAGGACTAAA  200

seq1  CGCTAAAACATCTCTTCACCCCAGCTTTTCTTCATTTGTTTTAAAAGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTAAAACATCTCTTCACCCCAGCTTTTCTTCATTTGTTTTAAAAGCTA  250

seq1  ATATACAAAAAAATATGGTATTTTCATGATACAATGTTTCGGTTAATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAAAAAAATATGGTATTTTCATGATACAATGTTTCGGTTAATCCT  300

seq1  CTTCTATTTCACTCTCTAGTTGTCTATCTGCCCCAACCCTTCTGCCTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATTTCACTCTCTAGTTGTCTATCTGCCCCAACCCTTCTGCCTTGC  350

seq1  AGTTCATGTCACATGCACTCGATTGTTTTCTGTTATCCTATTCATCCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATGTCACATGCACTCGATTGTTTTCTGTTATCCTATTCATCCCCT  400

seq1  TCGCTTTAAATCTCCCCCTCTTTGAAACTCTTTCTCTTTCGATGACCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTTTAAATCTCCCCCTCTTTGAAACTCTTTCTCTTTCGATGACCTAT  450

seq1  ACTTACACTTACTTTCATGTAATTATGCATAATTAAAATGTAAGAAGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACACTTACTTTCATGTAATTATGCATAATTAAAATGTAAGAAGCTG  500

seq1  TGAACTTTCAGTGAAGACCACTGCTAACATTTCATATGAGTGTACTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTTCAGTGAAGACCACTGCTAACATTTCATATGAGTGTACTTAAA  550

seq1  ATGGCTAAACATTTTCTTTTATGTGCTCCCAAGTTGTAGGGAATGTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTAAACATTTTCTTTTATGTGCTCCCAAGTTGTAGGGAATGTTCTT  600

seq1  TTTAATGTAACTACCAAACAAACAAATTTAATCTTATAACTTGTTCAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTAACTACCAAACAAACAAATTTAATCTTATAACTTGTTCAGGA  650

seq1  TCTATCTATGAAATCTTTAAAATTCTGTCAAATTGGTTTTACCTACCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTATGAAATCTTTAAAATTCTGTCAAATTGGTTTTACCTACCAAA  700

seq1  CATTATCTTTGTTCCTTTCCACCTTTATATAAATATAATTCTGCTATCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCTTTGTTCCTTTCCACCTTTATATAAATATAATTCTGCTATCAT  750

seq1  AATATTTTTATTTCCTCCTTTTGGTGCTATTTATTGATAAGATTCTCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTATTTCCTCCTTTTGGTGCTATTTATTGATAAGATTCTCACT  800

seq1  GTGACTTATTTGTGTTTCATATATCAGAAATTGAGCAGCATTTTATTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTATTTGTGTTTCATATATCAGAAATTGAGCAGCATTTTATTCTT  850

seq1  AAGTGTTATTCAACTACTTAAAAATCATGAGGTGTGTTTTTAATTTTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTATTCAACTACTTAAAAATCATGAGGTGTGTTTTTAATTTTGTA  900

seq1  TGCATATACTTAGTACCTCTGGATAAGGCATTAAGCTTACAATCTATGTA  950
      |||||||||||||||||||||||||| ||||||||||||| |||||||||
seq2  TGCATATACTTAGTACCTCTGGATAA-GCATTAAGCTTAC-ATCTATGTA  948

seq1  AGTGTTCAGTATCTGTTTTTTTAAAGCAGTGATTTATCTAATTATGTATA  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||| 
seq2  AGTGTTCAGTATCTGTTTTTTTAAAGCAGTGATTTATCTAA-TATGTAT-  996

seq1  ACTTGCTCTTTAATGTTTATATCGGTTTATATTTTCCATGTAAGAGCAGA  1050
      ||||||||||| ||||||||||||| ||||||||||||||| ||||||||
seq2  ACTTGCTCTTT-ATGTTTATATCGG-TTATATTTTCCATGT-AGAGCAGA  1043

seq1  TAGGATATGAATATCTA-TGACAAAAGCTGTTTAACTGTAAAGGTTTTCA  1099
      || |||||| ||||||| ||||  ||||||||||  |||||    |||||
seq2  TA-GATATG-ATATCTATTGAC--AAGCTGTTTACTTGTAA---GTTTCA  1086

seq1  TTTAAAGAAAACTTTAAAAGAAGATGGG  1127
      |   ||||||||||  ||||||||||||
seq2  T---AAGAAAACTT--AAAGAAGATGGG  1109