BAC Information

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BAC

Clone NameB6Ng01-326J14
Chromosome12 (Build37)
Map Location 7,239,978 - 7,241,045
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC238049, LOC100042118
Downstream geneLOC668380, EG668388, Apob, 1110057K04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326J14.bB6Ng01-326J14.g
ACCGA114369GA114370
length1,0681,177
definitionB6Ng01-326J14.b B6Ng01-326J14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgtactgcaaggtatacaataaaagtctgaaatacaaccagc
aacattaaagaaaaatgagagagagatgtgcaatgttggtaagagactaa
tgaatattatcacattatttatgcagtttaagaagatcaaatatgacaaa
tgtaatactagaacaatggaattaatctattaaaccaatggatgatatca
gttcatcccttatataaaatatgccttctaagtggcatttcagtctacct
acaaagtacgttataggcataaattccctatgcacagtataataaaccag
aaatttattacaaaatgatttcaaaaccaacataatcacttgtaaataaa
acaaaatctctgctaaatcatattcagctcagaagctaaatcgaatctgc
agcatcaagttattaaatttaactacaggaaggttgttatgcgtcacgct
aatctcatcacagctattgggtctctttcaggtgtggttagagctttata
aaaagcaaaattcatttacctaattatgtttttcattaaataagaaagaa
tgaaacaaaatgcaactaatattaaactccacaaattaagaaattcatat
taaataaacctaataagtcaatagctactaattttgaacagtaacagttt
aaaatttatgagaatgcattgtttttcatcattatttatgttaattgtgt
gtgtgtgcgtgtgtgtatgcatgtgcatgtgtacatgtgtctgtgtccat
ggggttgtatgcacatatgtgtacaggtgcccaagaagttgttaacttga
agtaatactgtaaatttccccaatctttgattatagtttaaatcaaagaa
atcttctttggtgggaggtggttatattaaggttgtctagtggtgattgt
tgtcagcacatagaggcttttataccaccttattttagagtaccactgat
aggcagcatgaagtcacatacttattctctagtaagtatgagcatataca
acacagaaccatcttaaagagtttggccatttgcctcatggattgcccat
gcacatgccctcatgtga

gaattctctgtttatctctatatcccatgttttaattgggttatttggat
ggttggtgtctgtcttcttgagttctttatatattttagatattagtcct
ctttcagatgtagggttagtgaagatcttttcccatttttaggtctttgt
tttatcctaataactgtgtcctttgacttacagaagggtttcatgagggt
cctatttattaattcttgaccttagtgcctgtgtcattggtgtactgttc
aggaagttgtccctcctaccaacaattttaactttactcttcattttctg
ttctattagatttagtgtatctggttttattttgaagtctttaattcatt
tatacttaagttttttgcagggtgagaaatatggatctatttgcattctt
ctaaatgcatacatctagttggactagcaccatttgttgaaaatgctctc
ccttttccattgtatgattttggcttctttgtcaaaaaacaagtgtccat
aggtgtgtgggtttatttctgggtcttcgattcaattctttcatcaattg
tcagtttctataccaataccatgcagttcttcttcttcttcttcttcttc
ttcttcttcttcttcttgttttactattgctctgtagaatagctttatgt
cagggatagtgatatctccagatgttcttttattgttcaagatcatttta
gataaagtggattttttgtttttccatatgaacttgaaaattattctttt
aaaatctgtaaataatagtgttgtaattttgattggaattgctttgtgtc
tgtagattgcttttggtaggatgaccattttcactaagtttatcctagca
atctttccatcttctgatatcttcctcaatatctttctttagagccttga
cgttcttgtcatataggcctttaacttgccttattagagttacaccgtgg
tatttttagtttgtttttgcctattgtgaaggtattgtttttctagtctt
tctcagtctatatgccttgtgtaaaggagagctactgacatctttgagtt
tatttttgtatcatgcactttgcctgaggtgttattagcctgtagtttct
gaatgaagtttgggggcactatatatatgcatggcatctgggatatggaa
taaccctttgaaacgttgtctcacact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_7239978_7241045
seq2: B6Ng01-326J14.b_51_1118

seq1  GAATTCACTGTACTGCAAGGTATACAATAAAAGTCTGAAATACAACCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTACTGCAAGGTATACAATAAAAGTCTGAAATACAACCAGC  50

seq1  AACATTAAAGAAAAATGAGAGAGAGATGTGCAATGTTGGTAAGAGACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTAAAGAAAAATGAGAGAGAGATGTGCAATGTTGGTAAGAGACTAA  100

seq1  TGAATATTATCACATTATTTATGCAGTTTAAGAAGATCAAATATGACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTATCACATTATTTATGCAGTTTAAGAAGATCAAATATGACAAA  150

seq1  TGTAATACTAGAACAATGGAATTAATCTATTAAACCAATGGATGATATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATACTAGAACAATGGAATTAATCTATTAAACCAATGGATGATATCA  200

seq1  GTTCATCCCTTATATAAAATATGCCTTCTAAGTGGCATTTCAGTCTACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATCCCTTATATAAAATATGCCTTCTAAGTGGCATTTCAGTCTACCT  250

seq1  ACAAAGTACGTTATAGGCATAAATTCCCTATGCACAGTATAATAAACCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTACGTTATAGGCATAAATTCCCTATGCACAGTATAATAAACCAG  300

seq1  AAATTTATTACAAAATGATTTCAAAACCAACATAATCACTTGTAAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATTACAAAATGATTTCAAAACCAACATAATCACTTGTAAATAAA  350

seq1  ACAAAATCTCTGCTAAATCATATTCAGCTCAGAAGCTAAATCGAATCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATCTCTGCTAAATCATATTCAGCTCAGAAGCTAAATCGAATCTGC  400

seq1  AGCATCAAGTTATTAAATTTAACTACAGGAAGGTTGTTATGCGTCACGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAAGTTATTAAATTTAACTACAGGAAGGTTGTTATGCGTCACGCT  450

seq1  AATCTCATCACAGCTATTGGGTCTCTTTCAGGTGTGGTTAGAGCTTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCATCACAGCTATTGGGTCTCTTTCAGGTGTGGTTAGAGCTTTATA  500

seq1  AAAAGCAAAATTCATTTACCTAATTATGTTTTTCATTAAATAAGAAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAAAATTCATTTACCTAATTATGTTTTTCATTAAATAAGAAAGAA  550

seq1  TGAAACAAAATGCAACTAATATTAAACTCCACAAATTAAGAAATTCATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAAAATGCAACTAATATTAAACTCCACAAATTAAGAAATTCATAT  600

seq1  TAAATAAACCTAATAAGTCAATAGCTACTAATTTTGAACAGTAACAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAACCTAATAAGTCAATAGCTACTAATTTTGAACAGTAACAGTTT  650

seq1  AAAATTTATGAGAATGCATTGTTTTTCATCATTATTTATGTTAATTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTATGAGAATGCATTGTTTTTCATCATTATTTATGTTAATTGTGT  700

seq1  GTGTGTGCGTGTGTGTATGCATGTGCATGTGTACATGTGTCTGTGTCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGCGTGTGTGTATGCATGTGCATGTGTACATGTGTCTGTGTCCAT  750

seq1  GGGGTTGTATGCACATATGTGTACAGGTGCCCAAGAAGTTGTTAACTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTGTATGCACATATGTGTACAGGTGCCCAAGAAGTTGTTAACTTGA  800

seq1  AGTAATACTGTAAATTTCCCCAATCTTTGATTATAGTTTAAATCAAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATACTGTAAATTTCCCCAATCTTTGATTATAGTTTAAATCAAAGAA  850

seq1  ATCTTCTTTGGTGGGAGGTGGTTATATT-AGGTTGTCTAGTGGTGATTGT  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATCTTCTTTGGTGGGAGGTGGTTATATTAAGGTTGTCTAGTGGTGATTGT  900

seq1  TGTCAGCACATAGAGGCTTTTATA-CACC-TATTTTAGAGTAACACTGAT  947
      |||||||||||||||||||||||| |||| |||||||||||| |||||||
seq2  TGTCAGCACATAGAGGCTTTTATACCACCTTATTTTAGAGTACCACTGAT  950

seq1  AGGCAGCATGAAGTCACATACTTTATTCCCTAGTTAAGTATGAGCATATA  997
      ||||||||||||||||||||| |||||| |||| ||||||||||||||||
seq2  AGGCAGCATGAAGTCACATAC-TTATTCTCTAG-TAAGTATGAGCATATA  998

seq1  CAACACAGAACCATCTTAGAGAAGTTTGGCCATTGGCTTCATTGCATGCC  1047
      |||||||||||||||||| || |||||||||||| || |||| |  ||||
seq2  CAACACAGAACCATCTTAAAG-AGTTTGGCCATTTGCCTCATGGATTGCC  1047

seq1  CTTTGCAACTG-CCTCATGTGA  1068
      |  ||||  || ||||||||||
seq2  C-ATGCACATGCCCTCATGTGA  1068


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