BAC Information

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BAC

Clone NameB6Ng01-326N15
Chromosome12 (Build37)
Map Location 19,245,907 - 19,246,933
singlet/doubletsinglet
Overlap genenone
Upstream geneEG632781, LOC668541, LOC673160, 5730507C01Rik, EG668553, LOC668558, LOC100042641, LOC668568, LOC668570, EG668413, LOC671401
Downstream geneEG546524, EG668584, EG544848, EG627871, LOC100042698, LOC629055, EG668588, LOC100042706, EG668594, EG668600, LOC100042727, LOC673301, EG668605
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326N15.bB6Ng01-326N15.g
ACCGA114554GA114555
length1,0511,028
definitionB6Ng01-326N15.b B6Ng01-326N15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgacagataaatcagataactacattgaggcagaactttttaaaagaa
tattataattagggctggcgagatggctcagtggttaagagagcagactg
ctcttccgaatgtcctgagttcaaatcccaacaaccacatagtggctcac
aaccatccgtaacgaaatctgatgccctcttctggagtatctgaggacag
ctacagtgtacttacatataataaataaataaatctttaaaaaaatattg
taattatagttacacttgaagtattgacattttacacttctgcttttctt
tagagcttacataaaatagtaatatttcctcagaggcataattgcatcag
cttgcacatgaaaattacctttcatttcttctcgaactttgacaatgtcc
ttcaatatgatgggtttcccaagtgtagcctaaaagacagtaccagaaaa
atgaatgatatagtattggaaataaggcaaaattcaaggtactgtaaatt
ttcacatcactggacactatttattcagctcagtcttccttgttctcaat
tgtaataacagaccaccatcactaaccaagagacatgtcttcccattatt
ttgaaaagcaaaagaaaattcacagtcatacctataacagtgaggttcca
gtaggtctccagcatcacatctttgtagagactcttctgggaaggatcca
gcaacttccactcttccccagtgaagttcacatgtacatcatcataagtc
actgcatcctaaaatgtcccatacatgtgtacatcacaagacatggtact
gacatcactgtaaagtaaacgtacgcttccttgaccatatattcatgtaa
ttctggtgcttcctccactgacttctggacatagacgtcataatgtaagt
accataacattttaaaagaaattgagttgaaaggttcacctgtgttgctt
aagaaaattttaaataaatagggtaaagtctttcgagaggaattccaatt
gagagtgagatgtagggcggaaacagatcaacagtactgaggacaacatc
c
gaattctcccaacataaaaaccttcatttttcaatgagaaaactgaagct
gggagccaagtggtttattcaagagccattggtttatgagaatgggagtg
gagaccatgggatactagaagacaggagcgttgttctgagaagagggagc
ccacagcaatcactctagattgcaccccactagaaacgcacaaagttcat
tgtgtagataggtcagcttggagatgcaaactctgttggagttatcagat
tggaaagcaggaataaactgtgactgtcatggtgaaagaaaattaaaatt
caaggtccatgactcatgcggcttgctagttaggagggctttttgggctt
agagcaaagaacaaaggctgtaaagtcatcccaggaaccaactagccata
aagatagggaaggcataaaagaatgtcctgactggcctggcgcctcccta
tctccctcccttctgacctgggttaaatgttaaccagatgctctgctgac
ttagataagcacccggctctcagaattcctgacgccctgacctgcacata
ctctttttctgtagtgtaatcattctgctgaagtttaaatgaaccaatcg
tgtaaacccgctcaaattcctccccccagccccagacccttttctttaaa
aacccctagctttcgagtctcgtggccaacaactgctgtcacctgtgtga
gatacctttttgcccagagcacccacattaaactacctcatgtgtttgca
tcaagacgtctctcatgattccttcggtgcacgctgaatggggaattcag
tgagggtttccccattaggctctttcagtggcaagaccaaggttgttcta
aagacacacttgtgccctcccttcagttttctgaggactgtgacaatgga
ccccaaggaaactgggaattttcaccaggaatttcaagctgaaattggga
aagtgctggatcctgacactagccagagcaggagtctgtctctagtgctg
gcagcctgcaagacagatatgggaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_19245907_19246933
seq2: B6Ng01-326N15.g_69_1096

seq1  GAATTCTCCCAACATAAAAACCTTCATTTTTCAATGAGAAAACTGAAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCAACATAAAAACCTTCATTTTTCAATGAGAAAACTGAAGCT  50

seq1  GGGAGCCAAGTGGTTTATTCAAGAGCCATTGGTTTATGAGAATGGGAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCAAGTGGTTTATTCAAGAGCCATTGGTTTATGAGAATGGGAGTG  100

seq1  GAGACCATGGGATACTAGAAGACAGGAGCGTTGTTCTGAGAAGAGGGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCATGGGATACTAGAAGACAGGAGCGTTGTTCTGAGAAGAGGGAGC  150

seq1  CCACAGCAATCACTCTAGATTGCACCCCACTAGAAACGCACAAAGTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCAATCACTCTAGATTGCACCCCACTAGAAACGCACAAAGTTCAT  200

seq1  TGTGTAGATAGGTCAGCTTGGAGATGCAAACTCTGTTGGAGTTATCAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGATAGGTCAGCTTGGAGATGCAAACTCTGTTGGAGTTATCAGAT  250

seq1  TGGAAAGCAGGAATAAACTGTGACTGTCATGGTGAAAGAAAATTAAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGCAGGAATAAACTGTGACTGTCATGGTGAAAGAAAATTAAAATT  300

seq1  CAAGGTCCATGACTCATGCGGCTTGCTAGTTAGGAGGGCTTTTTGGGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTCCATGACTCATGCGGCTTGCTAGTTAGGAGGGCTTTTTGGGCTT  350

seq1  AGAGCAAAGAACAAAGGCTGTAAAGTCATCCCAGGAACCAACTAGCCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAAGAACAAAGGCTGTAAAGTCATCCCAGGAACCAACTAGCCATA  400

seq1  AAGATAGGGAAGGCATAAAAGAATGTCCTGACTGGCCTGGCGCCTCCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGGGAAGGCATAAAAGAATGTCCTGACTGGCCTGGCGCCTCCCTA  450

seq1  TCTCCCTCCCTTCTGACCTGGGTTAAATGTTAACCAGATGCTCTGCTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCCCTTCTGACCTGGGTTAAATGTTAACCAGATGCTCTGCTGAC  500

seq1  TTAGATAAGCACCCGGCTCTCAGAATTCCTGACGCCCTGACCTGCACATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATAAGCACCCGGCTCTCAGAATTCCTGACGCCCTGACCTGCACATA  550

seq1  CTCTTTTTCTGTAGTGTAATCATTCTGCTGAAGTTTAAATGAACCAATCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTTCTGTAGTGTAATCATTCTGCTGAAGTTTAAATGAACCAATCG  600

seq1  TGTAAACCCGCTCAAATTCCTCCCCCCAGCCCCAGACCCTTTTCTTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACCCGCTCAAATTCCTCCCCCCAGCCCCAGACCCTTTTCTTTAAA  650

seq1  AACCCCTAGCTTTCGAGTCTCGTGGCCAACAACTGCTGTCACCTGTGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTAGCTTTCGAGTCTCGTGGCCAACAACTGCTGTCACCTGTGTGA  700

seq1  GATACCTTTTTGCCCAGAGCACCCACATTAAACTACCTCATGTGTTTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCTTTTTGCCCAGAGCACCCACATTAAACTACCTCATGTGTTTGCA  750

seq1  TCAAGACGTCTCTCATGATTCCTTCGGTGCACGCTGAATGGGGAATTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACGTCTCTCATGATTCCTTCGGTGCACGCTGAATGGGGAATTCAG  800

seq1  TGAGGGTTTCCCCATTAGGCTCTTTCAGTGGCAAGACCAAGGTTGTTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTTTCCCCATTAGGCTCTTTCAGTGGCAAGACCAAGGTTGTTCTA  850

seq1  AAGACACACTTGTGCCCTCCCTTCAGTTTTCTGAGGACTGTGACAATGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACACTTGTGCCCTCCCTTCAGTTTTCTGAGGACTGTGACAATGGA  900

seq1  CCCCAAGG-AACT-GGAATTTTCACCAGGAATTTCAAGCTGAAATTGGGA  948
      |||||||| |||| ||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGGAAACTGGGAATTTTCACCAGGAATTTCAAGCTGAAATTGGGA  950

seq1  AAGTGCTGGGATCCTGACACTAGCCAGAGCAGGAGTCTGTCTCTAGTGCT  998
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCT-GGATCCTGACACTAGCCAGAGCAGGAGTCTGTCTCTAGTGCT  999

seq1  GCCAGCCTGCAGGACAGATATGGGGAAGG  1027
      | ||||||||| |||||||||||| ||||
seq2  GGCAGCCTGCAAGACAGATATGGGAAAGG  1028