BAC Information

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BAC

Clone NameB6Ng01-327H21
Chromosome12 (Build37)
Map Location 60,516,560 - 60,517,709
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33, LOC665628, LOC238199, LOC665639
Downstream geneLOC665644, EG622488
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327H21.bB6Ng01-327H21.g
ACCGA115025GA115026
length1,145411
definitionB6Ng01-327H21.b B6Ng01-327H21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccttttgttagaatcattgttcccaaggtttagaaatatcgca
actatgttatcaacttagtgggaggcagagaagcaggactattgctcttg
ctcagtgtctccttctcattttagacctatggtttatctgttatatagtt
atcctgctcacacctatgagcccagtgctctgtccagctcatatgcattc
ttttgttttattctcagtgtgttatctaatttttgggtattatgtgggtc
agatactgcaacaacttaactgatacagaattttcaaaaaacaaaacaaa
acaaaacaaaaccacttctaatctagtaggataagagatgtgttctgctg
taaagcaaagattcctggggttgaatcctggctctactgtttcttggcca
tatgaccttgcattaaaaataaaagcaagaccctaatattatctccactg
tgaaatgtttggatcagggtctagcacagaacttgctcctgctggtaaaa
gctggatatctctattcattgttagataaagagggcacctgcaacccaca
tccctgtgagaggacggagtttccttcagagtgcaatcgtccatcataga
gaccgtgaagagcctgaccacccgagtttggtgctgcctggccttttatg
tttgttcttgattgagattctatgttctattttgggaataataataataa
taataataataataataataaagaaggagaaggaggagaaggagaaggag
aagaagaaggaagcataaaggaatcctgatacaggttggtttgttattat
ttgcctctctacagtttgaacatttagaaaacaatttctggttcctaaat
tatgctaaattaaagggtttcaatggattaatcaaggtgttctataatct
gcctctatagaagacagggagtaattacatgagctagaaaacataaacaa
cccaacataaggagaaaaggcaattattggtgtttcttctgcttctgtgt
gcgcttgatgtatgcagagaatagcatcagaattggctttctgctcctcc
agggtaagcagtgactggaaggaatccttgatcgttttattcatttgcat
aaaacctatagcctctttctattttatagacctattgtgaatgtc

tttgtttagctctgagccccatttttaatggggttatttgatttttctgg
agtccaccttcttgagttctttatatatattggatattagtcccctatct
gatttaggacaggtaaagatcctttcccaaactgttggtggcctttttgt
cttattgacggtgtcttttgcttgcagaagctttgcaattttatgaggtc
ccagaggactgtcttatctggcatcaaaaggagaaaagttccttggtcct
gtggaggattgatgcctcagcataggaaatgtcaggacagggaagcagga
gtgggttggtgagcagggggagagggagggaatagaggcgtttggtagga
gaaaaaaaaaggggggataacatatgaaatgtaaattaataatatctcta
attttgtttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_60516560_60517709
seq2: B6Ng01-327H21.b_49_1193

seq1  GAATTCTCCTTTTGTTAGAATCATTGTTCCCAAGGTTTAGAAATATCGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTTTGTTAGAATCATTGTTCCCAAGGTTTAGAAATATCGCA  50

seq1  ACTATGTTATCAACTTAGTGGGAGGCAGAGAAGCAGGACTATTGCTCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTTATCAACTTAGTGGGAGGCAGAGAAGCAGGACTATTGCTCTTG  100

seq1  CTCAGTGTCTCCTTCTCATTTTAGACCTATGGTTTATCTGTTATATAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGTCTCCTTCTCATTTTAGACCTATGGTTTATCTGTTATATAGTT  150

seq1  ATCCTGCTCACACCTATGAGCCCAGTGCTCTGTCCAGCTCATATGCATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCTCACACCTATGAGCCCAGTGCTCTGTCCAGCTCATATGCATTC  200

seq1  TTTTGTTTTATTCTCAGTGTGTTATCTAATTTTTGGGTATTATGTGGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTATTCTCAGTGTGTTATCTAATTTTTGGGTATTATGTGGGTC  250

seq1  AGATACTGCAACAACTTAACTGATACAGAATTTTCAAAAAACAAAACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTGCAACAACTTAACTGATACAGAATTTTCAAAAAACAAAACAAA  300

seq1  ACAAAACAAAACCACTTCTAATCTAGTAGGATAAGAGATGTGTTCTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACCACTTCTAATCTAGTAGGATAAGAGATGTGTTCTGCTG  350

seq1  TAAAGCAAAGATTCCTGGGGTTGAATCCTGGCTCTACTGTTTCTTGGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAAAGATTCCTGGGGTTGAATCCTGGCTCTACTGTTTCTTGGCCA  400

seq1  TATGACCTTGCATTAAAAATAAAAGCAAGACCCTAATATTATCTCCACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACCTTGCATTAAAAATAAAAGCAAGACCCTAATATTATCTCCACTG  450

seq1  TGAAATGTTTGGATCAGGGTCTAGCACAGAACTTGCTCCTGCTGGTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGTTTGGATCAGGGTCTAGCACAGAACTTGCTCCTGCTGGTAAAA  500

seq1  GCTGGATATCTCTATTCATTGTTAGATAAAGAGGGCACCTGCAACCCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATATCTCTATTCATTGTTAGATAAAGAGGGCACCTGCAACCCACA  550

seq1  TCCCTGTGAGAGGACGGAGTTTCCTTCAGAGTGCAATCGTCCATCATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTGAGAGGACGGAGTTTCCTTCAGAGTGCAATCGTCCATCATAGA  600

seq1  GACCGTGAAGAGCCTGACCACCCGAGTTTGGTGCTGCCTGGCCTTTTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCGTGAAGAGCCTGACCACCCGAGTTTGGTGCTGCCTGGCCTTTTATG  650

seq1  TTTGTTCTTGATTGAGATTCTATGTTCTATTTTGGGAATAATAATAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTTGATTGAGATTCTATGTTCTATTTTGGGAATAATAATAATAA  700

seq1  TAATAATAATAATAATAATAAAGAAGGAGAAGGAGGAGAAGGAGAAGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAATAATAATAATAAAGAAGGAGAAGGAGGAGAAGGAGAAGGAG  750

seq1  AAGAAGAAGGAAGCATAAAGGAATCCTGATACAGGTTGGTTTGTTATTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAGGAAGCATAAAGGAATCCTGATACAGGTTGGTTTGTTATTAT  800

seq1  TTGCCTCTCTACAGTTTGAACATTTAGAAAACAATTTCTGGTTCCTAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCTCTACAGTTTGAACATTTAGAAAACAATTTCTGGTTCCTAAAT  850

seq1  TATGCTAAATT-AAGGGTTTCAATGGATTAATCAAGGTGTTCTATAATCT  899
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TATGCTAAATTAAAGGGTTTCAATGGATTAATCAAGGTGTTCTATAATCT  900

seq1  GCCTCTATAGAAGACAGGGAGTAATTACATGAGCTAGAAAACATAAAACA  949
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  GCCTCTATAGAAGACAGGGAGTAATTACATGAGCTAGAAAACATAAA--C  948

seq1  AACCAAACATAAGGAGAAAAGGCAATTTATTGGTGTTTTCTTCTTGCTTC  999
      |||| |||||||||||||||||||| ||||||||| ||||||| ||||||
seq2  AACCCAACATAAGGAGAAAAGGCAA-TTATTGGTG-TTTCTTC-TGCTTC  995

seq1  TGTGTGCGGCTTGATGTATGCAGAGAATAGCAATCAG-ATTGGC-TTCTG  1047
      ||||||| ||||||||||||||||||||||| ||||| |||||| |||||
seq2  TGTGTGC-GCTTGATGTATGCAGAGAATAGC-ATCAGAATTGGCTTTCTG  1043

seq1  CTCCTCCAGGGGTAGGCAGTGACTGGA--GGATCCTTTTGATCCTTTTAT  1095
      |||||||| ||||| ||||||||||||  | ||||  |||||| ||||||
seq2  CTCCTCCA-GGGTAAGCAGTGACTGGAAGGAATCC--TTGATCGTTTTAT  1090

seq1  TCATTTTGCATTAAAAACTATAG-CTC-TTCTAATTTATAGACTTATTGT  1143
      ||| |||||| ||||| |||||| ||| ||||| ||||||||| ||||||
seq2  TCA-TTTGCA-TAAAACCTATAGCCTCTTTCTATTTTATAGACCTATTGT  1138

seq1  GAATGTC  1150
      |||||||
seq2  GAATGTC  1145


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