BAC Information

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BAC

Clone NameB6Ng01-328M24
Chromosome12 (Build37)
Map Location 68,994,706 - 69,101,794
singlet/doubletdoublet
Overlap genenone
Upstream geneMdga2, LOC100040745
Downstream geneLOC100040681, LOC100040696
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328M24.bB6Ng01-328M24.g
ACCGA115971GA115972
length1,1851,136
definitionB6Ng01-328M24.b B6Ng01-328M24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,100,617 - 69,101,794)(68,994,706 - 68,995,585)
sequence
gaattctatagcatttgctaattttaaactttatccttccatttataagt
gattagaatctcctttttttggtacagtactgtttgcttattaatttatt
ttttttgttcttgatacaagattcaactttattatcccaggataattaca
cagaatcgctgtgttttccagaatgttgtacaatacacaaaagtcctgcc
tcagcctatcgagggttgggagaagagctgtcgaataccatgcactgcag
tgcatatgttatcaattgacaaggtttaatagtcacttcagaaactgtct
gaggatacagagaaagtatcacaaagtggaaactagggagataaaaagca
aagcaactcaaaggtaccctgtccagcatcagctatgccaaagagcattt
acaagtgccatagcattaaaccatgcatgtgctccgtgtttgagaaagaa
aggtacttacagaatgggaaagacagacttggagtcaaaactgaatttgt
acaactgaaaggtctgcaagaaaagcatcctagaataaaggtcaattaac
attgaaacattcagtcattgaaacattcagacacaggatatacatttatt
ctcaccagaataatctttgaatgcagatttagaaatcacttcttaagttt
ggtaatacatggattcattagctcacctttgttcagtgtgtgggtattac
ccttcagtgtgattcatttaccatcagacaagctatattctgtggttata
ttattacagttttcatgcataaagccttgttccagatgaatctctgttca
gaatgaccagggattataataagagatagactatgccttcattaactgcc
ttggaaactgttttattaacatccatattatctaccctaccctttgcaat
ttctatcaccatattaagctaaactaggataaatggcatgcataattttc
ttaaaataatattgtatttgggttgtttttgaagaatatatttttctgaa
acctaagtaataatatgaaaatattattacctctaacaaagaagaaaaag
tatttaactaaattgggttccttgtagtgttctatcattattccccaaag
aagctgtgtccctaatggcatggtcatatgatttgtctcatcctttgaat
cagaaccttcaagaagtgcaatggtgttaaaaatt

gaattctctgtttagatctgccctgcatttttaattgggctacttgattt
gctgatttgatttacttaagttctctatatattttgtgcatcatctgtct
gtcagacgtaggatggatgaatatttttttctcattccagaggatgatgc
tttgtccttttgacagtgtcctttgcctaacagaagatttcagtttcatg
aggtcccatttattaatttttgatctaagtgcctgagctgttgatattct
gtttaggaagttgtctcctgtgccaatgcattcaaggccattctccactt
tctcttgtatcagatttagttttatgttgaggtcttcaatctatgtagac
atgaattttgtgcagaatgatagatatgagtctatttgcatttttctatg
tgcagacatccagttagaccaacattagttgaagatgccttccttttttc
cttgtatggctttggttctttgttgaaaatcaagtgtttatgttatgtgg
gtttatttatggatctcctatttgattcctttaatcaacttttctgtttt
tatgccaataccatgcagtttttattactctgtaatacaacctaaaatca
tggatggtgatacctccaggagttcttttattgttcgggattttttttta
actatcctgggtctcttggttttccttatgatgtttagtattttttttca
tgatctctaaagaattgtgttcaaattttcatgggaattacatagaatct
gtaggacttgctaagatcctaggacagtggaaattcctaagagtctagga
atctgaaatggacatcttatataaccacaaaagtcttccaatggagagat
tgtgacaccaaccctgccacaaaatctggaacctacaattttccctgcca
ccaaaatgtgcagaaataaagatgcagcagtaactgaaggaatggcagcc
accgactgacacaacttgagacctgtgtcatgagagagacttacccctga
tactataataatattcgtatactacagacatgagcttagcatgactgtca
tctggaaagcttcacagcagccgaatgtacgaatagagaaaacccacagc
aaaatgtagtagatctcgagaaatctttatgaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_69100617_69101794
seq2: B6Ng01-328M24.b_46_1230 (reverse)

seq1  AATTTT----ACCATTGCA--TCTTTGAAGTTCTGATCAAAAGAATGAGA  44
      ||||||    |||||||||  ||||  | ||||||||  |||| ||||||
seq2  AATTTTTAACACCATTGCACTTCTTGAAGGTTCTGATTCAAAGGATGAGA  50

seq1  CCAAATCATATGGCCATTGCAATTAGGAACACAGCTTCTTTTGGGGAAAT  94
       ||||||||||| ||| ||| |||||| |||||||||||||  ||| |||
seq2  -CAAATCATATGACCA-TGCCATTAGGGACACAGCTTCTTT--GGGGAAT  96

seq1  AATGATAAGAAACACTACAAAGGAACCAA-TTAGTTAAATACTTTT--CT  141
      |||||||   |||||||||| | | |||| ||||||||||||||||   |
seq2  AATGATA--GAACACTACAAGGAACCCAATTTAGTTAAATACTTTTTCTT  144

seq1  CTTTG-TAGAGGTAAT-ATATTTTCATATTATTACTTAGGTTTCAG-AAA  188
      ||||| |||||||||| ||||||||||||||||||||||||||||| |||
seq2  CTTTGTTAGAGGTAATAATATTTTCATATTATTACTTAGGTTTCAGAAAA  194

seq1  ATATATTCTTCAAAAACAA-CCAAATACAATATTATTTTAAGAAAATTAT  237
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATATATTCTTCAAAAACAACCCAAATACAATATTATTTTAAGAAAATTAT  244

seq1  GCATGCCATTTATCCTAGTTTAGCTTAATATGGTGATAGAAATTGCAAAG  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCCATTTATCCTAGTTTAGCTTAATATGGTGATAGAAATTGCAAAG  294

seq1  GGTAGGGTAGATAATATGGATGTTAATAAAACAGTTTCCAAGGCAGTTAA  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGGTAGATAATATGGATGTTAATAAAACAGTTTCCAAGGCAGTTAA  344

seq1  TGAAGGCATAGTCTATCTCTTATTATAATCCCTGGTCATTCTGAACAGAG  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCATAGTCTATCTCTTATTATAATCCCTGGTCATTCTGAACAGAG  394

seq1  ATTCATCTGGAACAAGGCTTTATGCATGAAAACTGTAATAATATAACCAC  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCTGGAACAAGGCTTTATGCATGAAAACTGTAATAATATAACCAC  444

seq1  AGAATATAGCTTGTCTGATGGTAAATGAATCACACTGAAGGGTAATACCC  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATAGCTTGTCTGATGGTAAATGAATCACACTGAAGGGTAATACCC  494

seq1  ACACACTGAACAAAGGTGAGCTAATGAATCCATGTATTACCAAACTTAAG  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTGAACAAAGGTGAGCTAATGAATCCATGTATTACCAAACTTAAG  544

seq1  AAGTGATTTCTAAATCTGCATTCAAAGATTATTCTGGTGAGAATAAATGT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATTTCTAAATCTGCATTCAAAGATTATTCTGGTGAGAATAAATGT  594

seq1  ATATCCTGTGTCTGAATGTTTCAATGACTGAATGTTTCAATGTTAATTGA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTGTGTCTGAATGTTTCAATGACTGAATGTTTCAATGTTAATTGA  644

seq1  CCTTTATTCTAGGATGCTTTTCTTGCAGACCTTTCAGTTGTACAAATTCA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTCTAGGATGCTTTTCTTGCAGACCTTTCAGTTGTACAAATTCA  694

seq1  GTTTTGACTCCAAGTCTGTCTTTCCCATTCTGTAAGTACCTTTCTTTCTC  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGACTCCAAGTCTGTCTTTCCCATTCTGTAAGTACCTTTCTTTCTC  744

seq1  AAACACGGAGCACATGCATGGTTTAATGCTATGGCACTTGTAAATGCTCT  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACGGAGCACATGCATGGTTTAATGCTATGGCACTTGTAAATGCTCT  794

seq1  TTGGCATAGCTGATGCTGGACAGGGTACCTTTGAGTTGCTTTGCTTTTTA  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATAGCTGATGCTGGACAGGGTACCTTTGAGTTGCTTTGCTTTTTA  844

seq1  TCTCCCTAGTTTCCACTTTGTGATACTTTCTCTGTATCCTCAGACAGTTT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTAGTTTCCACTTTGTGATACTTTCTCTGTATCCTCAGACAGTTT  894

seq1  CTGAAGTGACTATTAAACCTTGTCAATTGATAACATATGCACTGCAGTGC  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTGACTATTAAACCTTGTCAATTGATAACATATGCACTGCAGTGC  944

seq1  ATGGTATTCGACAGCTCTTCTCCCAACCCTCGATAGGCTGAGGCAGGACT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATTCGACAGCTCTTCTCCCAACCCTCGATAGGCTGAGGCAGGACT  994

seq1  TTTGTGTATTGTACAACATTCTGGAAAACACAGCGATTCTGTGTAATTAT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTATTGTACAACATTCTGGAAAACACAGCGATTCTGTGTAATTAT  1044

seq1  CCTGGGATAATAAAGTTGAATCTTGTATCAAGAACAAAAAAAATAAATTA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGATAATAAAGTTGAATCTTGTATCAAGAACAAAAAAAATAAATTA  1094

seq1  ATAAGCAAACAGTACTGTACCAAAAAAAGGAGATTCTAATCACTTATAAA  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAAACAGTACTGTACCAAAAAAAGGAGATTCTAATCACTTATAAA  1144

seq1  TGGAAGGATAAAGTTTAAAATTAGCAAATGCTATAGAATTC  1178
      |||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGATAAAGTTTAAAATTAGCAAATGCTATAGAATTC  1185


seq1: chr12_68994706_68995585
seq2: B6Ng01-328M24.g_332_1201

seq1  CCTGTGCCAATGCATTCAAGGCCATTCTCCACTTTCTCTTGTATCAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCCAATGCATTCAAGGCCATTCTCCACTTTCTCTTGTATCAGATT  50

seq1  TAGTTTTATGTTGAGGTCTTCAATCTATGTAGACATGAATTTTGTGCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTATGTTGAGGTCTTCAATCTATGTAGACATGAATTTTGTGCAGA  100

seq1  ATGATAGATATGAGTCTATTTGCATTTTTCTATGTGCAGACATCCAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAGATATGAGTCTATTTGCATTTTTCTATGTGCAGACATCCAGTTA  150

seq1  GACCAACATTAGTTGAAGATGCCTTCCTTTTTTCCTTGTATGGCTTTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAACATTAGTTGAAGATGCCTTCCTTTTTTCCTTGTATGGCTTTGGT  200

seq1  TCTTTGTTGAAAATCAAGTGTTTATGTTATGTGGGTTTATTTATGGATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTTGAAAATCAAGTGTTTATGTTATGTGGGTTTATTTATGGATCT  250

seq1  CCTATTTGATTCCTTTAATCAACTTTTCTGTTTTTATGCCAATACCATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTGATTCCTTTAATCAACTTTTCTGTTTTTATGCCAATACCATGC  300

seq1  AGTTTTTATTACTCTGTAATACAACCTAAAATCATGGATGGTGATACCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTATTACTCTGTAATACAACCTAAAATCATGGATGGTGATACCTC  350

seq1  CAGGAGTTCTTTTATTGTTCGGGATTTTTTTTTAACTATCCTGGGTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTTCTTTTATTGTTCGGGATTTTTTTTTAACTATCCTGGGTCTCT  400

seq1  TGGTTTTCCTTATGATGTTTAGTATTTTTTTTCATGATCTCTAAAGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTCCTTATGATGTTTAGTATTTTTTTTCATGATCTCTAAAGAATT  450

seq1  GTGTTCAAATTTTCATGGGAATTACATAGAATCTGTAGGACTTGCTAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCAAATTTTCATGGGAATTACATAGAATCTGTAGGACTTGCTAAGA  500

seq1  TCCTAGGACAGTGGAAATTCCTAAGAGTCTAGGAATCTGAAATGGACATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGACAGTGGAAATTCCTAAGAGTCTAGGAATCTGAAATGGACATC  550

seq1  TTATATAACCACAAAAGTCTTCCAATGGAGAGATTGTGACACCAACCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAACCACAAAAGTCTTCCAATGGAGAGATTGTGACACCAACCCTG  600

seq1  CCACAAAATCTGGAACCTACAATTTTCCCTGCCACCAAAATGTGCAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAATCTGGAACCTACAATTTTCCCTGCCACCAAAATGTGCAGAAA  650

seq1  TAAAGATGCAGCAGTAACTGAAGGAATGGCCAGCCACCGACTGACACAAC  700
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TAAAGATGCAGCAGTAACTGAAGGAATGG-CAGCCACCGACTGACACAAC  699

seq1  TTGAGACCTGTGTCATGAGAGAGAACTTACCCCTGATACTATTAATAATA  750
      ||||||||||||||||||||||| ||||||||||||||||| ||||||||
seq2  TTGAGACCTGTGTCATGAGAGAG-ACTTACCCCTGATACTA-TAATAATA  747

seq1  TTCGGTTATACTACCAGACATGAGCTTAGCATGACTGTCATCTGAGAGGC  800
      ||||  ||||||| ||||||||||||||||||||||||||||||  | ||
seq2  TTCG--TATACTA-CAGACATGAGCTTAGCATGACTGTCATCTGGAAAGC  794

seq1  TTCAACCAGCAGCAGATGGAAACAGATAGAG-AGACCCACAGCAAAATAG  849
      ||||  ||||||| ||  |  ||  |||||| | |||||||||||||| |
seq2  TTCA--CAGCAGCCGAATG-TACGAATAGAGAAAACCCACAGCAAAAT-G  840

seq1  TAGGTAGATCTCAGAG-AATCTTATGGAAAAG  880
      || ||||||||| ||| ||||||   ||||||
seq2  TA-GTAGATCTC-GAGAAATCTTTATGAAAAG  870


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