MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-332G16
Chromosome	12 (Build37)
Map Location	107,264,771 - 107,374,466
singlet/doublet	doublet
Overlap gene	Vrk1
Upstream gene	Snhg10, Glrx5, LOC100040301, Tcl1b2, Tcl1b1, Tcl1b5, Tcl1b3, Tcl1b4, Tcl1, LOC100040310, 2810011L19Rik, LOC100040339, EG668081, D430019H16Rik, Bdkrb2, Bdkrb1, 2410024A21Rik, 4933433P14Rik, Ak7, Papola
Downstream gene	LOC100040386, LOC100040404, LOC100040420, 1700121N20Rik, LOC100041191, LOC100040451, LOC673604
Link	Open Mouse BAC browser

Click to get alignment info.

name	Snhg10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69434 MGI:1916684
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Glrx5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73046 MGI:1920296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040301 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040301
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Tcl1b2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27381 MGI:1351609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcl1b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27379 MGI:1351601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcl1b5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27382 MGI:1351635
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcl1b3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27378 MGI:1351600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcl1b4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27380 MGI:1351604
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21432 MGI:1097166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040310 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040310
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	2810011L19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69952 MGI:1917202
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	LOC100040339 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG668081 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668081 MGI:3645292
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	D430019H16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268595 MGI:2443127
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 131 ESTs

name	Bdkrb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12062 MGI:102845
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bdkrb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12061 MGI:88144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410024A21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76559 MGI:1923809
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933433P14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66787 MGI:1914037
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ak7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78801 MGI:1926051
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 2 Proteins

name	Papola (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18789 MGI:109301
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vrk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22367 MGI:1261847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC100040386 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100040404 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040404
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100040420 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040420
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	1700121N20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76639 MGI:1923889
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100041191 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041191
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100040451 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040451
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC673604 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:673604
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Glrx5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365117 GeneID:73046 MGI:1920296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutaredoxin 5 homolog (S. cerevisiae) transcript_id : NM_028419.2

name	LOC100040301 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263495 GeneID:100040301
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to T-cell leukemia protein Tcl1b3a transcript_id : XM_001474463.1

name	Tcl1b2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305554 GeneID:27381 MGI:1351609
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-cell leukemia/lymphoma 1B, 2 transcript_id : NM_013775.1

name	Tcl1b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130857 GeneID:27379 MGI:1351601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-cell leukemia/lymphoma 1B, 1 transcript_id : NM_013773.2

name	Tcl1b5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305560 GeneID:27382 MGI:1351635
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-cell leukemia/lymphoma 1B, 5 transcript_id : NM_013776.1

name	Tcl1b3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305556 GeneID:27378 MGI:1351600
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-cell leukemia/lymphoma 1B, 3 transcript_id : NM_013772.1

name	Tcl1b4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130858 GeneID:27380 MGI:1351604
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-cell leukemia/lymphoma 1B, 4 transcript_id : NM_013774.2

name	Tcl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981970 GeneID:21432 MGI:1097166
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-cell lymphoma breakpoint 1 transcript_id : NM_009337.2

name	LOC100040310 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263499 GeneID:100040310
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040310 transcript_id : XM_001474482.1

name	2810011L19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263531 GeneID:69952 MGI:1917202
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : RIKEN cDNA 2810011L19 gene transcript_id : XM_001476131.1

name	LOC100040339 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263501 GeneID:100040339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040339 transcript_id : XM_001474521.1

name	EG668081 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94393126 GeneID:668081 MGI:3645292
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG668081 transcript_id : XM_994212.1

name	D430019H16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263533 GeneID:268595 MGI:2443127
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 131 ESTs product : RIKEN cDNA D430019H16 gene transcript_id : XM_001476158.1

name	Bdkrb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560615 GeneID:12062 MGI:102845
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bradykinin receptor, beta 2 transcript_id : NM_009747.2

name	Bdkrb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83582803 GeneID:12061 MGI:88144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bradykinin receptor, beta 1 transcript_id : NM_007539.2

name	2410024A21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118197273 GeneID:76559 MGI:1923809
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410024A21 gene transcript_id : NM_029654.4

name	4933433P14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115292449 GeneID:66787 MGI:1914037
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933433P14 gene transcript_id : NM_178613.3

name	Ak7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94393130 GeneID:78801 MGI:1926051
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 2 Proteins product : adenylate kinase 7 transcript_id : XM_994344.1

name	Papola (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115511060 GeneID:18789 MGI:109301
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : poly (A) polymerase alpha transcript_id : NM_011112.2

name	Vrk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71067123 GeneID:22367 MGI:1261847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vaccinia related kinase 1 transcript_id : NM_011705.3

name	Vrk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71067121 GeneID:22367 MGI:1261847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vaccinia related kinase 1 transcript_id : NM_001029843.1

name	Vrk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71067119 GeneID:22367 MGI:1261847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vaccinia related kinase 1 transcript_id : NM_001029844.1

name	LOC100040404 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263503 GeneID:100040404
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001474629.1

name	LOC100040420 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263505 GeneID:100040420
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to reproductive homeobox on X chromosome 8 transcript_id : XM_001474648.1

name	1700121N20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94393132 GeneID:76639 MGI:1923889
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 1700121N20 gene transcript_id : XM_901257.2

name	LOC100040451 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263508 GeneID:100040451
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to gamma-aminobutyric acid A receptor, epsilon transcript_id : XM_001474698.1

name	Glrx5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312153 CCDS:CCDS26154.1 GeneID:73046 MGI:1920296
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] GO_process : GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : glutaredoxin 5 protein_id : NP_082695.1

name	LOC100040301 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263496 GeneID:100040301
definition	codon_start : 1 product : similar to T-cell leukemia protein Tcl1b3a protein_id : XP_001474513.1

name	Tcl1b2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305555 GeneID:27381 MGI:1351609
definition	codon_start : 1 product : T-cell leukemia/lymphoma 1B, 2 protein_id : NP_038803.1

name	Tcl1b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305553 GeneID:27379 MGI:1351601
definition	codon_start : 1 product : T-cell leukemia/lymphoma 1B, 1 protein_id : NP_038801.1

name	Tcl1b5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305561 GeneID:27382 MGI:1351635
definition	codon_start : 1 product : T-cell leukemia/lymphoma 1B, 5 protein_id : NP_038804.1

name	Tcl1b3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305557 GeneID:27378 MGI:1351600
definition	codon_start : 1 product : T-cell leukemia/lymphoma 1B, 3 protein_id : NP_038800.1

name	Tcl1b4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305559 GeneID:27380 MGI:1351604
definition	codon_start : 1 product : T-cell leukemia/lymphoma 1B, 4 protein_id : NP_038802.1

name	Tcl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678257 GeneID:21432 MGI:1097166
definition	GO_component : GO:0005938 - cell cortex [Evidence IDA]; GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005792 - microsome [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0045120 - pronucleus [Evidence IDA] codon_start : 1 product : T-cell lymphoma breakpoint 1 protein_id : NP_033363.1

name	LOC100040310 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263500 GeneID:100040310
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474532.1

name	2810011L19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263532 GeneID:69952 MGI:1917202
definition	codon_start : 1 product : hypothetical protein LOC69952 protein_id : XP_001476181.1

name	LOC100040339 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263502 GeneID:100040339
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474571.1

name	EG668081 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94393127 GeneID:668081 MGI:3645292
definition	codon_start : 1 product : hypothetical protein protein_id : XP_999306.1

name	D430019H16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263534 GeneID:268595 MGI:2443127
definition	codon_start : 1 product : hypothetical protein LOC268595 protein_id : XP_001476208.1

name	Bdkrb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560616 GeneID:12062 MGI:102845
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : kinin B2 product : bradykinin receptor, beta 2 protein_id : NP_033877.2

name	Bdkrb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671632 CCDS:CCDS26155.1 GeneID:12061 MGI:88144
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : kinin B1 product : bradykinin receptor, beta 1 protein_id : NP_031565.1

name	2410024A21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118197274 GeneID:76559 MGI:1923809
definition	codon_start : 1 product : hypothetical protein LOC76559 protein_id : NP_083930.5

name	4933433P14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115292450 GeneID:66787 MGI:1914037
definition	codon_start : 1 product : hypothetical protein LOC66787 protein_id : NP_848728.2

name	Ak7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94393131 GeneID:78801 MGI:1926051
definition	codon_start : 1 product : adenylate kinase 7 protein_id : XP_999438.1

name	Papola (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21914853 GeneID:18789 MGI:109301
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0004652 - polynucleotide adenylyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : poly (A) polymerase alpha protein_id : NP_035242.1

name	Vrk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755985 GeneID:22367 MGI:1261847
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : vaccinia related kinase 1 isoform a protein_id : NP_035835.1

name	Vrk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71067122 CCDS:CCDS26157.1 GeneID:22367 MGI:1261847
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : vaccinia related kinase 1 isoform b protein_id : NP_001025014.1

name	Vrk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71067120 CCDS:CCDS26158.1 GeneID:22367 MGI:1261847
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA] codon_start : 1 note : isoform c is encoded by transcript variant 3 product : vaccinia related kinase 1 isoform c protein_id : NP_001025015.1

name	LOC100040404 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263504 GeneID:100040404
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474679.1

name	LOC100040420 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263506 GeneID:100040420
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474698.1

name	1700121N20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82943147 GeneID:76639 MGI:1923889
definition	codon_start : 1 product : hypothetical protein LOC76639 protein_id : XP_906350.1

name	LOC100040451 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263509 GeneID:100040451
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474748.1

name	LOC100040386 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040386
definition	number : 2 pseudo : _no_value

name	LOC100040386 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040386
definition	number : 1 pseudo : _no_value

name	LOC100041191 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041191
definition	number : 1 pseudo : _no_value

name	LOC673604 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673604
definition	number : 1 pseudo : _no_value

name	Snhg10 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:141803286 GeneID:69434 MGI:1916684
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : small nucleolar RNA host gene (non-protein coding) 10 transcript_id : NR_003145.2

clone name	MSMg01-416M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498L08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-197L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247F19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-332G16.b	B6Ng01-332G16.g
ACC	GA118527	GA118528
length	427	974
definition	B6Ng01-332G16.b	B6Ng01-332G16.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(107,374,034 - 107,374,466)	(107,264,771 - 107,265,738)
sequence	ctgattctcctgcctcaacccccacctcccagtgcagggctgggaacatg catgctctgctcaaaactatgacttcttatggagaggaaagaaagaaaga aagaaaagggggctggtgagatggctcagtggttaagagcaccgactgct cttccgaaggtcccgagttcaaatcccagcaaccacatggtggctcataa ccatccgtaacgaaatctgatgccctcttctggagtgtctgaagacagct acagtgaacttacatataataaataaataaataaataaataaatctttaa aaaaaaaagaaagaaagaaaagaacttccctttctgttttctaccacacg ccgaggcggaaggcattattgtgtcctctgtctaaaatctgccaaaaatt tattgagtctggcttatttgaaaaaaa	gaattctccgcggctgtcctggggagatattgataggtttaacgaggatt cccagaagaataactgtggacagttactggagggttcaagaagtgtgtaa tatgtaactaacttcttttattaaaaactaaatactgtgtaaaacgttgg taatatacttgagtggctaactggccacgtttttggtattcactttgccc agacatttcttctagcgcttttccttgagttagggtcgggagctggcccc tccctggaggcagcgtttcaggcttgcaccctcgcagctctgactctgtg aagaacagcatgccagacacccatgtttctgcactgcctttctcactggg tgtggggatcttggggtagattatcttctgtatacatcaggttagaagga ggcctgtggaggcctctcatgccaccgaggggaagtagtagcagggaggt ggcttgaattggggtttggaatgaacgcactcagttttcagttaaatgtg agttctactgttagtgcttcccctttagacacgagttaaggaaatacgag gtgaagaagtgcatgtatttaaagtattttaccctataaaaattttatcc tcctcttctcttctcttctcttctcttctcttctcttctcttctcttctc ttcttttctcttcggtttttcaagacagaatttctttgtgtagccctggc tatcctgtaacacactatgtagaccaggctggcctcgaactcagagatcc tgctctgcttcctgagcactgggattaaaggcgtgcgccaccactgcctg ggggtgctaattttctaatgcaagtgaaaaatgggaccagaaacattttt tcttctgcagtgcccatttctcttttccagaatttgcagtggtgattcat cacctagcttctttccagcctaggtgtgaagcatcgtaggtgtgaggaga cgtttgaagcacccttcacagttt
quality values	Open. Hide. 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 49 62 46 32 28 28 28 33 59 54 54 54 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 42 49 38 42 54 62 62 62 62 62 62 62 54 54 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 51 59 43 59 59 62 62 36 59 50 40 34 56 62 62 59 51 59 46 49 62 34 50 43 51 50 34 36 46 44 59 46 48 56 56 59 59 56 43 59 50 43 59 46 49 43 46 35 48 36 45 49 49 51 43 43 51 51 51 51 43 30 43 35 45 48 40 34 43 30 46 38 29 18 31 34 35 56 35 31 31 28 34 49 50 43 48 32 32 49 39 43 43 43 23 38 46 34 46 43 37 46 48 45 48 32 48 59 46 54 38 46 46 46 56 49 59 49 27 34 16 27 27 34 46 33 41 59 51 38 34 38 45 27 43 23 27 34 38 49 51 43 40 28 34 46 30 18 18 18 18 23 11 43 13 19 13 12 18 13 39 34 49 41 43 30 34 34 46 30 30 16 19 22 34 21 27 28 25 27 30 34 31 18 23 34 18 23 27 17 34 13 38 28 18 18 34 43 39 27 44 41 39 45 27 38 23 24 36 38 30 37 43 51 49 50 50 38 50 39 39 27 27 34 30 24 27 34 23 34 24 27 18 27 28 20 46 41 43 27 23 40 51 27 21 44 24 23 30 17 19 23 18 22 12 18 23 18 13 18 12 13 22 9 35 27 13 12 10 18 13 13 12 17 16 31 16 27 25 23 30 13 10 14 18 12 16 36 27 13 24 23 14 9 14 9 9 18 13 9 9 13 8 17 13 23 17 10 8 8	Open. Hide. 62 59 43 59 62 62 62 45 51 37 45 32 33 32 48 59 62 62 62 62 62 62 62 62 59 59 59 43 62 59 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 59 34 42 54 48 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 49 54 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 56 54 62 62 31 62 62 62 62 46 62 62 62 62 52 52 62 52 62 62 62 62 62 62 62 39 62 62 52 62 62 62 62 62 62 62 54 62 62 46 43 58 54 54 58 52 54 58 58 58 52 54 58 58 52 52 58 58 58 58 58 52 45 58 58 48 58 45 58 58 58 54 58 58 58 58 58 58 58 54 58 54 54 54 58 52 54 58 48 45 44 52 54 58 22 18 20 16 13 27 22 19 16 13 28 52 50 54 52 54 50 50 48 34 49 50 43 45 16 48 41 50 58 25 49 51 46 51 50 58 33 41 58 42 41 23 58 58 51 38 26 29 51 46 48 50 50 36 58 32 32 58 37 41 44 51 50 39 37 35 40 32 35 50 51 41 25 35 48 37 46 40 36 18 51 42 54 39 29 32 50 39 39 41 32 16 22 32 50 50 37 39 32 27 33 31 24 33 39 35 32 19 6 12 42 35 17 36 38 41 50 22 19 9 32 8 37 52 37 37 31 49 36 47 40 17 21 31 39 49 26 31 39 41 51 22 29 30 32 28 33 51 49 38 23 16 16 54 50 25 38 21 19 26 32 37 21 12 15 32 28 46 31 26 25 37 26 21 12 16 32 24 52 37 32 37 25 45 29 30 27 44 38 44 34 29 21 15 15 41 14 16 19 32 29 16 27 47 40 41 25 33 32 40 38 34 31 16 13 31 32 25 31 22 14 25 40 40 47 53 16 13 15 36 29 31 33 31 13 15 9 31 10 40 34 16 22 32 40 29 31 31 28 51 51 7 9 27 19 26 32 27 24 37 16 29 28 30 25 9 15 12 7 23 23 5 9 17 31 28 30 13 21 29 31 26 11 12 9 12 23 26 46 34 31 22 7 15 13 10 29 33 6 10 13 31 6 19 9 21 18 35 11 12 19 8 17 35 22 23 7 15 6 13 21 6 5 7 5 26 16 11 13 29 23 9 30 32 7 6 15 13 11 13 13 8 13 18 9 9 11 16 36 32

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_107374034_107374466
seq2: B6Ng01-332G16.b_47_479 (reverse)

seq1  TTTTTTTCTACTAAGCCAGACTCACTAAATTTTTGGCAGATTTTAGACAG  50
      |||||||| | ||||||||||||| |||||||||||||||||||||||||
seq2  TTTTTTTCAAATAAGCCAGACTCAATAAATTTTTGGCAGATTTTAGACAG  50

seq1  AGGACACAATAATGCCTTCCGCCTCGGCGTGTGGTAGAAAACAGAAAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACAATAATGCCTTCCGCCTCGGCGTGTGGTAGAAAACAGAAAGGG  100

seq1  AAGTTCTTTTCTTTCTTTCTTTTTTTTTTAAAGATTTATTTATTTATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTTTTCTTTCTTTCTTTTTTTTTTAAAGATTTATTTATTTATTTA  150

seq1  TTTATTTATTATATGTAAGTTCACTGTAGCTGTCTTCAGACACTCCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTATATGTAAGTTCACTGTAGCTGTCTTCAGACACTCCAGAA  200

seq1  GAGGGCATCAGATTTCGTTACGGATGGTTATGAGCCACCATGTGGTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCATCAGATTTCGTTACGGATGGTTATGAGCCACCATGTGGTTGCT  250

seq1  GGGATTTGAACTCGGGACCTTCGGAAGAGCAGTCGGTGCTCTTAACCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTGAACTCGGGACCTTCGGAAGAGCAGTCGGTGCTCTTAACCACT  300

seq1  GAGCCATCTCACCAGCCCCCTTTTCTTTCTTTCTTTCTTTCCTCTCCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATCTCACCAGCCCCCTTTTCTTTCTTTCTTTCTTTCCTCTCCATA  350

seq1  AGAAGTCATAGTTTTGAGCAGAGCATGCATGTTCCCAGCCCTGCACTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCATAGTTTTGAGCAGAGCATGCATGTTCCCAGCCCTGCACTGGG  400

seq1  AGGTGGGGGTTGAGGCAGGAGAATCAGGAATTC  433
      |||||||||||||||||||||||||||||||||
seq2  AGGTGGGGGTTGAGGCAGGAGAATCAGGAATTC  433

seq1: chr12_107264771_107265738
seq2: B6Ng01-332G16.g_66_1039

seq1  GAATTCTCCGCGGCTGTCCTGGGGAGATATTGATAGGTTTAACGAGGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCGCGGCTGTCCTGGGGAGATATTGATAGGTTTAACGAGGATT  50

seq1  CCCAGAAGAATAACTGTGGACAGTTACTGGAGGGTTCAAGAAGTGTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAGAATAACTGTGGACAGTTACTGGAGGGTTCAAGAAGTGTGTAA  100

seq1  TATGTAACTAACTTCTTTTATTAAAAACTAAATACTGTGTAAAACGTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAACTAACTTCTTTTATTAAAAACTAAATACTGTGTAAAACGTTGG  150

seq1  TAATATACTTGAGTGGCTAACTGGCCACGTTTTTGGTATTCACTTTGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATACTTGAGTGGCTAACTGGCCACGTTTTTGGTATTCACTTTGCCC  200

seq1  AGACATTTCTTCTAGCGCTTTTCCTTGAGTTAGGGTCGGGAGCTGGCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTTCTTCTAGCGCTTTTCCTTGAGTTAGGGTCGGGAGCTGGCCCC  250

seq1  TCCCTGGAGGCAGCGTTTCAGGCTTGCACCCTCGCAGCTCTGACTCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGAGGCAGCGTTTCAGGCTTGCACCCTCGCAGCTCTGACTCTGTG  300

seq1  AAGAACAGCATGCCAGACACCCATGTTTCTGCACTGCCTTTCTCACTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGCATGCCAGACACCCATGTTTCTGCACTGCCTTTCTCACTGGG  350

seq1  TGTGGGGATCTTGGGGTAGATTATCTTCTGTATACATCAGGTTAGAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGATCTTGGGGTAGATTATCTTCTGTATACATCAGGTTAGAAGGA  400

seq1  GGCCTGTGGAGGCCTCTCATGCCACCGAGGGGAAGTAGTAGCAGGGAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTGGAGGCCTCTCATGCCACCGAGGGGAAGTAGTAGCAGGGAGGT  450

seq1  GGCTTGAATTGGGGTTTGGAATGAACGCACTCAGTTTTCAGTTAAATGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGAATTGGGGTTTGGAATGAACGCACTCAGTTTTCAGTTAAATGTG  500

seq1  AGTTCTACTGTTAGTGCTTCCCCTTTAGACACGAGTTAAGGAAATACGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTACTGTTAGTGCTTCCCCTTTAGACACGAGTTAAGGAAATACGAG  550

seq1  GTGAAGAAGTGCATGTATTTAAAGTATTTTACCCTATAAAAATTTTATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAAGTGCATGTATTTAAAGTATTTTACCCTATAAAAATTTTATCC  600

seq1  TCCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC  650

seq1  TTCTTTTCTCTTCGGTTTTTCAAGACAGAATTTCTTTGTGTAGCCCTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTCTTCGGTTTTTCAAGACAGAATTTCTTTGTGTAGCCCTGGC  700

seq1  TATCCTGTAACACACTATGTAGACCAGGCTGGCCTCGAACTCAGAGATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGTAACACACTATGTAGACCAGGCTGGCCTCGAACTCAGAGATCC  750

seq1  TGCTCTGCTTCCTGAGCACTGGGATTAAAGGCGTGCGCCACCACTGCCT-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGCTCTGCTTCCTGAGCACTGGGATTAAAGGCGTGCGCCACCACTGCCTG  800

seq1  GGGGTGCTAATTTTCTAATGCAAGTGAAAAATGGGACCAGAAAACATTTT  849
      |||||||||||||||||||||||||||||||||||||||||||   ||||
seq2  GGGGTGCTAATTTTCTAATGCAAGTGAAAAATGGGACCAGAAACATTTTT  850

seq1  TCTTCTGCAGTGCCCATTTCTCTTTCCCAGAATTTGCAGT-GTGAGTCAT  898
      ||||||||||||||||||||||||| |||||||||||||| |||| ||||
seq2  TCTTCTGCAGTGCCCATTTCTCTTTTCCAGAATTTGCAGTGGTGATTCAT  900

seq1  CACCTAGC-TCTTTCCAGCTTAGGTGTGAAGCATCGTAGGTGTGA-GAGA  946
      |||||||| |||||||||| ||||||||||||||||||||||||| ||||
seq2  CACCTAGCTTCTTTCCAGCCTAGGTGTGAAGCATCGTAGGTGTGAGGAGA  950

seq1  CG-TTGAAG-ACCCATCACAGTTT  968
      || |||||| |||| |||||||||
seq2  CGTTTGAAGCACCCTTCACAGTTT  974

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Alignment Information