BAC Information

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BAC

Clone NameB6Ng01-332G16
Chromosome12 (Build37)
Map Location 107,264,771 - 107,374,466
singlet/doubletdoublet
Overlap geneVrk1
Upstream geneSnhg10, Glrx5, LOC100040301, Tcl1b2, Tcl1b1, Tcl1b5, Tcl1b3, Tcl1b4, Tcl1, LOC100040310, 2810011L19Rik, LOC100040339, EG668081, D430019H16Rik, Bdkrb2, Bdkrb1, 2410024A21Rik, 4933433P14Rik, Ak7, Papola
Downstream geneLOC100040386, LOC100040404, LOC100040420, 1700121N20Rik, LOC100041191, LOC100040451, LOC673604
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332G16.bB6Ng01-332G16.g
ACCGA118527GA118528
length427974
definitionB6Ng01-332G16.b B6Ng01-332G16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,374,034 - 107,374,466)(107,264,771 - 107,265,738)
sequence
ctgattctcctgcctcaacccccacctcccagtgcagggctgggaacatg
catgctctgctcaaaactatgacttcttatggagaggaaagaaagaaaga
aagaaaagggggctggtgagatggctcagtggttaagagcaccgactgct
cttccgaaggtcccgagttcaaatcccagcaaccacatggtggctcataa
ccatccgtaacgaaatctgatgccctcttctggagtgtctgaagacagct
acagtgaacttacatataataaataaataaataaataaataaatctttaa
aaaaaaaagaaagaaagaaaagaacttccctttctgttttctaccacacg
ccgaggcggaaggcattattgtgtcctctgtctaaaatctgccaaaaatt
tattgagtctggcttatttgaaaaaaa
gaattctccgcggctgtcctggggagatattgataggtttaacgaggatt
cccagaagaataactgtggacagttactggagggttcaagaagtgtgtaa
tatgtaactaacttcttttattaaaaactaaatactgtgtaaaacgttgg
taatatacttgagtggctaactggccacgtttttggtattcactttgccc
agacatttcttctagcgcttttccttgagttagggtcgggagctggcccc
tccctggaggcagcgtttcaggcttgcaccctcgcagctctgactctgtg
aagaacagcatgccagacacccatgtttctgcactgcctttctcactggg
tgtggggatcttggggtagattatcttctgtatacatcaggttagaagga
ggcctgtggaggcctctcatgccaccgaggggaagtagtagcagggaggt
ggcttgaattggggtttggaatgaacgcactcagttttcagttaaatgtg
agttctactgttagtgcttcccctttagacacgagttaaggaaatacgag
gtgaagaagtgcatgtatttaaagtattttaccctataaaaattttatcc
tcctcttctcttctcttctcttctcttctcttctcttctcttctcttctc
ttcttttctcttcggtttttcaagacagaatttctttgtgtagccctggc
tatcctgtaacacactatgtagaccaggctggcctcgaactcagagatcc
tgctctgcttcctgagcactgggattaaaggcgtgcgccaccactgcctg
ggggtgctaattttctaatgcaagtgaaaaatgggaccagaaacattttt
tcttctgcagtgcccatttctcttttccagaatttgcagtggtgattcat
cacctagcttctttccagcctaggtgtgaagcatcgtaggtgtgaggaga
cgtttgaagcacccttcacagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_107374034_107374466
seq2: B6Ng01-332G16.b_47_479 (reverse)

seq1  TTTTTTTCTACTAAGCCAGACTCACTAAATTTTTGGCAGATTTTAGACAG  50
      |||||||| | ||||||||||||| |||||||||||||||||||||||||
seq2  TTTTTTTCAAATAAGCCAGACTCAATAAATTTTTGGCAGATTTTAGACAG  50

seq1  AGGACACAATAATGCCTTCCGCCTCGGCGTGTGGTAGAAAACAGAAAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACAATAATGCCTTCCGCCTCGGCGTGTGGTAGAAAACAGAAAGGG  100

seq1  AAGTTCTTTTCTTTCTTTCTTTTTTTTTTAAAGATTTATTTATTTATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTTTTCTTTCTTTCTTTTTTTTTTAAAGATTTATTTATTTATTTA  150

seq1  TTTATTTATTATATGTAAGTTCACTGTAGCTGTCTTCAGACACTCCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTATATGTAAGTTCACTGTAGCTGTCTTCAGACACTCCAGAA  200

seq1  GAGGGCATCAGATTTCGTTACGGATGGTTATGAGCCACCATGTGGTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCATCAGATTTCGTTACGGATGGTTATGAGCCACCATGTGGTTGCT  250

seq1  GGGATTTGAACTCGGGACCTTCGGAAGAGCAGTCGGTGCTCTTAACCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTGAACTCGGGACCTTCGGAAGAGCAGTCGGTGCTCTTAACCACT  300

seq1  GAGCCATCTCACCAGCCCCCTTTTCTTTCTTTCTTTCTTTCCTCTCCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATCTCACCAGCCCCCTTTTCTTTCTTTCTTTCTTTCCTCTCCATA  350

seq1  AGAAGTCATAGTTTTGAGCAGAGCATGCATGTTCCCAGCCCTGCACTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCATAGTTTTGAGCAGAGCATGCATGTTCCCAGCCCTGCACTGGG  400

seq1  AGGTGGGGGTTGAGGCAGGAGAATCAGGAATTC  433
      |||||||||||||||||||||||||||||||||
seq2  AGGTGGGGGTTGAGGCAGGAGAATCAGGAATTC  433

seq1: chr12_107264771_107265738
seq2: B6Ng01-332G16.g_66_1039

seq1  GAATTCTCCGCGGCTGTCCTGGGGAGATATTGATAGGTTTAACGAGGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCGCGGCTGTCCTGGGGAGATATTGATAGGTTTAACGAGGATT  50

seq1  CCCAGAAGAATAACTGTGGACAGTTACTGGAGGGTTCAAGAAGTGTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAGAATAACTGTGGACAGTTACTGGAGGGTTCAAGAAGTGTGTAA  100

seq1  TATGTAACTAACTTCTTTTATTAAAAACTAAATACTGTGTAAAACGTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAACTAACTTCTTTTATTAAAAACTAAATACTGTGTAAAACGTTGG  150

seq1  TAATATACTTGAGTGGCTAACTGGCCACGTTTTTGGTATTCACTTTGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATACTTGAGTGGCTAACTGGCCACGTTTTTGGTATTCACTTTGCCC  200

seq1  AGACATTTCTTCTAGCGCTTTTCCTTGAGTTAGGGTCGGGAGCTGGCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTTCTTCTAGCGCTTTTCCTTGAGTTAGGGTCGGGAGCTGGCCCC  250

seq1  TCCCTGGAGGCAGCGTTTCAGGCTTGCACCCTCGCAGCTCTGACTCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGAGGCAGCGTTTCAGGCTTGCACCCTCGCAGCTCTGACTCTGTG  300

seq1  AAGAACAGCATGCCAGACACCCATGTTTCTGCACTGCCTTTCTCACTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGCATGCCAGACACCCATGTTTCTGCACTGCCTTTCTCACTGGG  350

seq1  TGTGGGGATCTTGGGGTAGATTATCTTCTGTATACATCAGGTTAGAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGATCTTGGGGTAGATTATCTTCTGTATACATCAGGTTAGAAGGA  400

seq1  GGCCTGTGGAGGCCTCTCATGCCACCGAGGGGAAGTAGTAGCAGGGAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTGGAGGCCTCTCATGCCACCGAGGGGAAGTAGTAGCAGGGAGGT  450

seq1  GGCTTGAATTGGGGTTTGGAATGAACGCACTCAGTTTTCAGTTAAATGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGAATTGGGGTTTGGAATGAACGCACTCAGTTTTCAGTTAAATGTG  500

seq1  AGTTCTACTGTTAGTGCTTCCCCTTTAGACACGAGTTAAGGAAATACGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTACTGTTAGTGCTTCCCCTTTAGACACGAGTTAAGGAAATACGAG  550

seq1  GTGAAGAAGTGCATGTATTTAAAGTATTTTACCCTATAAAAATTTTATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAAGTGCATGTATTTAAAGTATTTTACCCTATAAAAATTTTATCC  600

seq1  TCCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC  650

seq1  TTCTTTTCTCTTCGGTTTTTCAAGACAGAATTTCTTTGTGTAGCCCTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTCTTCGGTTTTTCAAGACAGAATTTCTTTGTGTAGCCCTGGC  700

seq1  TATCCTGTAACACACTATGTAGACCAGGCTGGCCTCGAACTCAGAGATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGTAACACACTATGTAGACCAGGCTGGCCTCGAACTCAGAGATCC  750

seq1  TGCTCTGCTTCCTGAGCACTGGGATTAAAGGCGTGCGCCACCACTGCCT-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGCTCTGCTTCCTGAGCACTGGGATTAAAGGCGTGCGCCACCACTGCCTG  800

seq1  GGGGTGCTAATTTTCTAATGCAAGTGAAAAATGGGACCAGAAAACATTTT  849
      |||||||||||||||||||||||||||||||||||||||||||   ||||
seq2  GGGGTGCTAATTTTCTAATGCAAGTGAAAAATGGGACCAGAAACATTTTT  850

seq1  TCTTCTGCAGTGCCCATTTCTCTTTCCCAGAATTTGCAGT-GTGAGTCAT  898
      ||||||||||||||||||||||||| |||||||||||||| |||| ||||
seq2  TCTTCTGCAGTGCCCATTTCTCTTTTCCAGAATTTGCAGTGGTGATTCAT  900

seq1  CACCTAGC-TCTTTCCAGCTTAGGTGTGAAGCATCGTAGGTGTGA-GAGA  946
      |||||||| |||||||||| ||||||||||||||||||||||||| ||||
seq2  CACCTAGCTTCTTTCCAGCCTAGGTGTGAAGCATCGTAGGTGTGAGGAGA  950

seq1  CG-TTGAAG-ACCCATCACAGTTT  968
      || |||||| |||| |||||||||
seq2  CGTTTGAAGCACCCTTCACAGTTT  974