BAC Information

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BAC

Clone NameB6Ng01-335B21
Chromosome12 (Build37)
Map Location 65,164,640 - 65,266,366
singlet/doubletdoublet
Overlap genenone
Upstream geneEG382606, LOC435302
Downstream geneEG623046, LOC623123, LOC217645, LOC217647, Gm527, Klhl28, A430041B07Rik, Prpf39, Fkbp3, Fancm, C79407
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335B21.bB6Ng01-335B21.g
ACCGA120445GA120446
length9791,119
definitionB6Ng01-335B21.b B6Ng01-335B21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,265,836 - 65,266,366)(65,164,640 - 65,165,769)
sequence
gaattcctatcaatattcatttaaaaattacacaccttaaaatattacta
atgttaaaatatttaatattttaatatgagtaggagagggttggcatagt
gtctcaaattcagaagaacttgctttaaaaactacacctgagttaggtgc
taggatccttatggtggaagaggagagccagagaaccaactgccactagt
tgtcctctggcctcctcatacagcccaatgataagcaaacacaaatatac
tttaacacacatgtgcgcatgcacatgcacacacatacacacatatgaat
aaaatatatagaaaagtgattaggaaagacaaatgatggtttgaatttga
tcagtgcatgctgtatagatgtattaaaatgacacattttaacattaata
ggtaaattattctcatttttttaaaattttatttatttacattccaactg
ttgccacccttcctggtcccccttccatgagtttttcaccccttccctcc
attttgcatcttaaagggtgcttcccaaccaacccaccctctcccacctc
acctctgtagcatcccatttccctgggacatcaactttctacaggattaa
gtgaacctttaaccgctgaagccatacaaggttgtcttctgctacatgtg
tactaggggccactgaccagtcatgtatactctaagttggtggcttagtc
tctgggagttctgacgggtacatttagttgacactgttgttcttcctatg
gggcttgtcatcccctttagctccttcagtccttcccctaactcttccat
agggggcccccagattattccaatgagtggctatcagtatgtgcatctgt
ctcagtcagctggtggtagaccctctcagatagccatgctgggctcttgt
ctgtaagcacaagtcatcagtactagtgtcagggtttgatgcttgtacat
gggatggatcccaagttgggctgaacctc

gaattcaagcaggggttgatcaatatctgactagtcagcgttgcacatga
acagtatactctgttgtacatgatcacattagggagataacttcagcaca
ctgtatagttcaaaagttaaaagaatggatattgagagcctttaccacaa
agaagattaaaaatttaagagaactatatactctacctgagtaagcatga
cataatgtatgcatgagtcaaaatatcatcaaaattccacttacatactt
gtttccatattttgattaaaataaatttaacttaagccacattataaatc
tataaaaacaaaagccaaggaaattactggaacagaattgagatttatca
gtgctactctgcagtttatataatattgtactatgtctatcaatacactt
attgtatgtttctaaacccagcattctcagggagagacctaaaagctcat
gcagtctagtttcaggtagcagtaatacaagcctgtcaaagcaggggttc
ctaaactcttcttcagcacaaagtccagggtcagttctgagtgtcagtac
atgttacagattagttattaaatatagtaaatattacattaacatttgca
atcatatacaccggcatttgtatcttttaaaaaattatttattcacttta
catcccaatcactgttccccctcccagttcctacttcccaccatccctcc
tcccaatatcccacctcatctcctgagagtggagcccctcctgggtatct
ccccaccctggcacatcaagttcctacaggactatagaatttttctactg
agaccaggcaagatagttgatttagggaaatggattccacatgcaggcaa
cagttttaaggacaacccctgatctagttgcttgaggttcatataaagac
caagcaacatatgttacttatgtgcagacgtgcctaagtgcagtcagtat
attctctttgggttggtggtttaatgagagcccccaaggatccaggtagt
gattctctgctcttcctgtgagttcctaacacatttggggctcaaacctt
cccttcctctccaatagagtcccagcctctatcaatgtttccattccctc
gtggtgctggtagagcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_65265836_65266366
seq2: B6Ng01-335B21.b_48_578 (reverse)

seq1  TGGTTGGGAAGCACCCTTTAAGATGCAAAATGGAGGGAAGGGGTGAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGGAAGCACCCTTTAAGATGCAAAATGGAGGGAAGGGGTGAAAAA  50

seq1  CTCATGGAAGGGGGACCAGGAAGGGTGGCAACAGTTGGAATGTAAATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGGAAGGGGGACCAGGAAGGGTGGCAACAGTTGGAATGTAAATAAA  100

seq1  TAAAATTTTAAAAAAATGAGAATAATTTACCTATTAATGTTAAAATGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTTAAAAAAATGAGAATAATTTACCTATTAATGTTAAAATGTGT  150

seq1  CATTTTAATACATCTATACAGCATGCACTGATCAAATTCAAACCATCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAATACATCTATACAGCATGCACTGATCAAATTCAAACCATCATT  200

seq1  TGTCTTTCCTAATCACTTTTCTATATATTTTATTCATATGTGTGTATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTCCTAATCACTTTTCTATATATTTTATTCATATGTGTGTATGTG  250

seq1  TGTGCATGTGCATGCGCACATGTGTGTTAAAGTATATTTGTGTTTGCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATGTGCATGCGCACATGTGTGTTAAAGTATATTTGTGTTTGCTTA  300

seq1  TCATTGGGCTGTATGAGGAGGCCAGAGGACAACTAGTGGCAGTTGGTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGGCTGTATGAGGAGGCCAGAGGACAACTAGTGGCAGTTGGTTCT  350

seq1  CTGGCTCTCCTCTTCCACCATAAGGATCCTAGCACCTAACTCAGGTGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCTCCTCTTCCACCATAAGGATCCTAGCACCTAACTCAGGTGTAG  400

seq1  TTTTTAAAGCAAGTTCTTCTGAATTTGAGACACTATGCCAACCCTCTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAGCAAGTTCTTCTGAATTTGAGACACTATGCCAACCCTCTCCT  450

seq1  ACTCATATTAAAATATTAAATATTTTAACATTAGTAATATTTTAAGGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATATTAAAATATTAAATATTTTAACATTAGTAATATTTTAAGGTGT  500

seq1  GTAATTTTTAAATGAATATTGATAGGAATTC  531
      |||||||||||||||||||||||||||||||
seq2  GTAATTTTTAAATGAATATTGATAGGAATTC  531


seq1: chr12_65164640_65165769
seq2: B6Ng01-335B21.g_67_1185

seq1  GAATTCAAGCAGGGGTTGATCAATATCTGACTAGTCAGCGTTGCACATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCAGGGGTTGATCAATATCTGACTAGTCAGCGTTGCACATGA  50

seq1  ACAGTATACTCTGTTGTACATGATCACATTAGGGAGATAACTTCAGCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATACTCTGTTGTACATGATCACATTAGGGAGATAACTTCAGCACA  100

seq1  CTGTATAGTTCAAAAGTTAAAAGAATGGATATTGAGAGCCTTTACCACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATAGTTCAAAAGTTAAAAGAATGGATATTGAGAGCCTTTACCACAA  150

seq1  AGAAGATTAAAAATTTAAGAGAACTATATACTCTACCTGAGTAAGCATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATTAAAAATTTAAGAGAACTATATACTCTACCTGAGTAAGCATGA  200

seq1  CATAATGTATGCATGAGTCAAAATATCATCAAAATTCCACTTACATACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATGTATGCATGAGTCAAAATATCATCAAAATTCCACTTACATACTT  250

seq1  GTTTCCATATTTTGATTAAAATAAATTTAACTTAAGCCACATTATAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCATATTTTGATTAAAATAAATTTAACTTAAGCCACATTATAAATC  300

seq1  TATAAAAACAAAAGCCAAGGAAATTACTGGAACAGAATTGAGATTTATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAACAAAAGCCAAGGAAATTACTGGAACAGAATTGAGATTTATCA  350

seq1  GTGCTACTCTGCAGTTTATATAATATTGTACTATGTCTATCAATACACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTACTCTGCAGTTTATATAATATTGTACTATGTCTATCAATACACTT  400

seq1  ATTGTATGTTTCTAAACCCAGCATTCTCAGGGAGAGACCTAAAAGCTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATGTTTCTAAACCCAGCATTCTCAGGGAGAGACCTAAAAGCTCAT  450

seq1  GCAGTCTAGTTTCAGGTAGCAGTAATACAAGCCTGTCAAAGCAGGGGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCTAGTTTCAGGTAGCAGTAATACAAGCCTGTCAAAGCAGGGGTTC  500

seq1  CTAAACTCTTCTTCAGCACAAAGTCCAGGGTCAGTTCTGAGTGTCAGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACTCTTCTTCAGCACAAAGTCCAGGGTCAGTTCTGAGTGTCAGTAC  550

seq1  ATGTTACAGATTAGTTATTAAATATAGTAAATATTACATTAACATTTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACAGATTAGTTATTAAATATAGTAAATATTACATTAACATTTGCA  600

seq1  ATCATATACACCGGCATTTGTATCTTTTAAAAAATTATTTATTCACTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATACACCGGCATTTGTATCTTTTAAAAAATTATTTATTCACTTTA  650

seq1  CATCCCAATCACTGTTCCCCCTCCCAGTTCCTACTTCCCACCATCCCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCAATCACTGTTCCCCCTCCCAGTTCCTACTTCCCACCATCCCTCC  700

seq1  TCCCAATATCCCACCTCATCTCCTGAGAGTGGAGCCCCTCCTGGGTATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATATCCCACCTCATCTCCTGAGAGTGGAGCCCCTCCTGGGTATCT  750

seq1  CCCCACCCTGGCACATCAAGTTCCTACAGGACTATAGAATTTTTCTACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCTGGCACATCAAGTTCCTACAGGACTATAGAATTTTTCTACTG  800

seq1  AGACCAGGCAAGATAGTTGATTTAGGGAAATGGATTCCACATGCAGGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGGCAAGATAGTTGATTTAGGGAAATGGATTCCACATGCAGGCAA  850

seq1  CAGTTTTAAGGACAACCCCTGATCTAGTTGCTTGAGGTTCATATAAAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTAAGGACAACCCCTGATCTAGTTGCTTGAGGTTCATATAAAGAC  900

seq1  CAAGCAACATATGTTACTTATGTGCAGACGTGCCTAAGTGCAGTCAGTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAACATATGTTACTTATGTGCAGACGTGCCTAAGTGCAGTCAGTAT  950

seq1  ATTCTCTTT-GGTTGGTGGTTTAATTGAGAGCCCCCAAGGATCCAGGTTA  999
      ||||||||| |||||||||||||| |||||||||||||||||||||| ||
seq2  ATTCTCTTTGGGTTGGTGGTTTAA-TGAGAGCCCCCAAGGATCCAGG-TA  998

seq1  GTTGATTCTCTTGCTCTTCCTGTGGAGTTCCTAACACATTTGGGGCCTCC  1049
      | |||||||| |||||||||||| ||||||||||||||||||||||   |
seq2  G-TGATTCTC-TGCTCTTCCTGT-GAGTTCCTAACACATTTGGGGC--TC  1043

seq1  AAACCTTTCCCCTTCTCTCCCATAAGAGTTCCCAAGCTCTATCCAATGTT  1099
      ||||| ||||| | |||||| || |||| |||||  |||||| |||||||
seq2  AAACC-TTCCCTTCCTCTCCAAT-AGAG-TCCCAGCCTCTAT-CAATGTT  1089

seq1  TCCA-TCCCTCTTTGGTGCTGGGTAGAGCATC  1130
      |||| ||||||  ||||||| |||||||||||
seq2  TCCATTCCCTC-GTGGTGCT-GGTAGAGCATC  1119


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