BAC Information

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BAC

Clone NameB6Ng01-335N04
Chromosome12 (Build37)
Map Location 64,337,619 - 64,436,389
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC622746, LOC100040438, 1700047L15Rik, Tspyl-ps, EG665741, EG382606
Downstream geneLOC435302
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335N04.bB6Ng01-335N04.g
ACCGA120929GA120930
length642986
definitionB6Ng01-335N04.b B6Ng01-335N04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,435,748 - 64,436,389)(64,337,619 - 64,338,221)
sequence
gaattctttcttcttgaaaagtttttaagtgatgcctacaatttaaaagt
tcttgtaccactataaatatggatacagataacatgtataataagcagct
tcatgttaaaaggtacatttatagctaaaatactgtcaatactggtgcta
atactcacagatacagctgtgtatttccaaaataaatgtcatcaagatga
gctagctataatccatagaaaataaatgaagaggcagatggaacttttac
gtatataatgaacaggaacacaacagtgacaaagagtaaacacaaccaaa
agaacatattgatatgtattagaaacaggatgcaaataaaaggaaagttt
aaaacataagaatatgtttttataaatatctttatacaaaaattgtcaaa
aactgcaaactatggtgtcaattgaagggatggtctttcttatgggatta
caaaccagggagatccaaaaagttaattttcaggtgtgggtaatttcctc
tgcttagcttttaattttcttaaagaatgatattaagttggccatcagtg
gaaagagaggctcattggtcttgcaaactttatatgcctcagtatagggg
aatgccagggccaagaagtgggagtggatgtgtaggggagtg

gaattctttcttttattaatggtttctaaacaaaagagataagctttaca
tctatgtcttgtcatagttttaaattcaaatttaaagttgttagatattt
tatcatttatttctgagattaatataattataataattacatcattttcc
acttcccttttctccttctaaaccagcttatgtgcactcctcactctcct
tcaaatctgtgacctattattcattaagtgttgttacagacatatatgta
tgtaggaatataaacatatatattatttagaaaatatattaaacatagta
tatgataaatatttctatacatatactgcttaatctgtacaatgttacta
actttttcttgtgtatagtcatccactttggcttagagtgttcttcattt
tctgtagggctggatttgtggatagatattgtttaaactttgttttgtca
tgtaatagcttgatttctccatctagggtgcatgggagtgttactaagta
atctattatttttttatagactgcatgactgacatctcttcagactcttc
tgcattttagaggctctttcaagaagttaggtataattctgataggtctg
cctttgtatatttcttggtcttttgccctggcagctttattttctgtagc
attatgattactatgtgacaggatgattttcttttttcttttctggtcta
atctatttgggattcttctaagtttcttgtatgtttatagacatctcttt
ctttaggtttggacaattttgttctatgattttgttgaaaataatttctg
agcttaggagctgggactcttcatcttccttctatttctgtaatttttag
gttaaaaatttttacagtacctcaaatttcctggctgttttcttgccagt
attttttgtttaacattttcacttactgatgtaacatttttttttcctaa
tgtatcttctatgcctcagaatctctcttccatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_64435748_64436389
seq2: B6Ng01-335N04.b_46_687 (reverse)

seq1  CACTCCCCTACACATCCACTCCCACTTCTTGGCCCTGGCATTCCCCTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCCTACACATCCACTCCCACTTCTTGGCCCTGGCATTCCCCTATA  50

seq1  CTGAGGCATATAAAGTTTGCAAGACCAATGAGCCTCTCTTTCCACTGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCATATAAAGTTTGCAAGACCAATGAGCCTCTCTTTCCACTGATG  100

seq1  GCCAACTTAATATCATTCTTTAAGAAAATTAAAAGCTAAGCAGAGGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACTTAATATCATTCTTTAAGAAAATTAAAAGCTAAGCAGAGGAAAT  150

seq1  TACCCACACCTGAAAATTAACTTTTTGGATCTCCCTGGTTTGTAATCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACACCTGAAAATTAACTTTTTGGATCTCCCTGGTTTGTAATCCCA  200

seq1  TAAGAAAGACCATCCCTTCAATTGACACCATAGTTTGCAGTTTTTGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAGACCATCCCTTCAATTGACACCATAGTTTGCAGTTTTTGACAA  250

seq1  TTTTTGTATAAAGATATTTATAAAAACATATTCTTATGTTTTAAACTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTATAAAGATATTTATAAAAACATATTCTTATGTTTTAAACTTTC  300

seq1  CTTTTATTTGCATCCTGTTTCTAATACATATCAATATGTTCTTTTGGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTTGCATCCTGTTTCTAATACATATCAATATGTTCTTTTGGTTG  350

seq1  TGTTTACTCTTTGTCACTGTTGTGTTCCTGTTCATTATATACGTAAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACTCTTTGTCACTGTTGTGTTCCTGTTCATTATATACGTAAAAGT  400

seq1  TCCATCTGCCTCTTCATTTATTTTCTATGGATTATAGCTAGCTCATCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTGCCTCTTCATTTATTTTCTATGGATTATAGCTAGCTCATCTTG  450

seq1  ATGACATTTATTTTGGAAATACACAGCTGTATCTGTGAGTATTAGCACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATTTATTTTGGAAATACACAGCTGTATCTGTGAGTATTAGCACCA  500

seq1  GTATTGACAGTATTTTAGCTATAAATGTACCTTTTAACATGAAGCTGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGACAGTATTTTAGCTATAAATGTACCTTTTAACATGAAGCTGCTT  550

seq1  ATTATACATGTTATCTGTATCCATATTTATAGTGGTACAAGAACTTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACATGTTATCTGTATCCATATTTATAGTGGTACAAGAACTTTTAA  600

seq1  ATTGTAGGCATCACTTAAAAACTTTTCAAGAAGAAAGAATTC  642
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGGCATCACTTAAAAACTTTTCAAGAAGAAAGAATTC  642


seq1: chr12_64337619_64338221
seq2: B6Ng01-335N04.g_69_671

seq1  GAATTCTTTCTTTTATTAATGGTTTCTAAACAAAAGAGATAAGCTTTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTTTATTAATGGTTTCTAAACAAAAGAGATAAGCTTTACA  50

seq1  TCTATGTCTTGTCATAGTTTTAAATTCAAATTTAAAGTTGTTAGATATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTCTTGTCATAGTTTTAAATTCAAATTTAAAGTTGTTAGATATTT  100

seq1  TATCATTTATTTCTGAGATTAATATAATTATAATAATTACATCATTTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTTATTTCTGAGATTAATATAATTATAATAATTACATCATTTTCC  150

seq1  ACTTCCCTTTTCTCCTTCTAAACCAGCTTATGTGCACTCCTCACTCTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCTTTTCTCCTTCTAAACCAGCTTATGTGCACTCCTCACTCTCCT  200

seq1  TCAAATCTGTGACCTATTATTCATTAAGTGTTGTTACAGACATATATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCTGTGACCTATTATTCATTAAGTGTTGTTACAGACATATATGTA  250

seq1  TGTAGGAATATAAACATATATATTATTTAGAAAATATATTAAACATAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGAATATAAACATATATATTATTTAGAAAATATATTAAACATAGTA  300

seq1  TATGATAAATATTTCTATACATATACTGCTTAATCTGTACAATGTTACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATAAATATTTCTATACATATACTGCTTAATCTGTACAATGTTACTA  350

seq1  ACTTTTTCTTGTGTATAGTCATCCACTTTGGCTTAGAGTGTTCTTCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTCTTGTGTATAGTCATCCACTTTGGCTTAGAGTGTTCTTCATTT  400

seq1  TCTGTAGGGCTGGATTTGTGGATAGATATTGTTTAAACTTTGTTTTGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGGGCTGGATTTGTGGATAGATATTGTTTAAACTTTGTTTTGTCA  450

seq1  TGTAATAGCTTGATTTCTCCATCTAGGGTGCATGGGAGTGTTACTAAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAGCTTGATTTCTCCATCTAGGGTGCATGGGAGTGTTACTAAGTA  500

seq1  ATCTATTATTTTTTTATAGACTGCATGACTGACATCTCTTCAGACTCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTATTTTTTTATAGACTGCATGACTGACATCTCTTCAGACTCTTC  550

seq1  TGCATTTTAGAGGCTCTTTCAAGAAGTTAGGTATAATTCTGATAGGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTTAGAGGCTCTTTCAAGAAGTTAGGTATAATTCTGATAGGTCTG  600

seq1  CCT  603
      |||
seq2  CCT  603


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