BAC Information

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BAC

Clone NameB6Ng01-341I22
Chromosome12 (Build37)
Map Location 81,960,585 - 81,961,447
singlet/doubletsinglet
Overlap gene4933426M11Rik
Upstream geneLOC435309, LOC100041674, LOC666754, Zfp36l1, Actn1, Wdr22, Exdl2, 2310002D06Rik, Galntl1, LOC100041715, Erh, Slc39a9, 3830431G21Rik, Gm1568
Downstream geneSfrs5, Slc10a1, Smoc1, Slc8a3, LOC100042143, LOC100042148, EG214321, Hspe1-ps2, Adam4, 1810020G14Rik, Synj2bp, Adam21, Med6, Ttc9, LOC100041821, Map3k9, Pcnx
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341I22.bB6Ng01-341I22.g
ACCGA124906GA124907
length1,160870
definitionB6Ng01-341I22.b B6Ng01-341I22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtatcccatttttaatagggttatttggttt
tctgaagtccaacttctttcattctttatatatactggatattagccccc
tatcagatttaggattggtaaagatcttttcctaatctgttggttgctgt
tttgtcttattgaccgtgtcctttgccttacagaagattttatgaggtcc
catttgtcgattctcaatcttacagcacaagccactgctgttctgttcag
gaatctttcccctgtgcccatatgttcaagactcttccccactttctcct
ctatacgtttcagtgtctctgcttttatgtggagttccttgatccactta
gacctgagctttttacaaggagataagaatggatcaattcgaattcttct
acatgctaaccgccagctgagccaacaccatttgttgaagatgctccttt
gtcaaagatcaagtggccataggtgtgtgggttcatttctgggtcttcaa
ttctgttccattggtctacttgtctgtcgctataccagtaccatgcagtt
tttatcacaattgctctgtagtacagctttaggtcaggcatggtgattcc
accagaggtttttgttttgtttttttttatctttgagcagagtttttgct
atcctaggttttttgttattccagatgaatttgcaaattgccctttctaa
ctctgtgaagaattgagttggaattttggtggggattgcattgaatctgt
agattgctttcggcaggatagccattttgactatattaatcctgccaatc
catgagcatgggagatctttccatcttctgagatcttcttcaatttcttt
cttcagagacttgaagttcttctcatacagatctttcacttcccttaatt
acagtcacaccaagggtatttttatattatttgtgactatttgaagaatc
ttgttccctaattattttctcagcctgttatcttgtgtagagaaaggcac
tgatttgttgagttaaatttataccagctacttcactgagtgttattcag
gttaagaagttctctgtagatttttggggtccgcttatatactatccatg
tcatctgccaatgaatttggtctctcattcaatgataccgtgaatctctt
ctggtgtgct
gaattccagtaacaagatgaagacttaatttttttcattgttttctagat
aaaggttattaaatctagattaaaggatttttgtttattaaatgtagcat
ttgtttatttgtacacacatggagagtaggggctccatcagataatatct
ctaaaccaagactgttaaactggccagtccaaaaacaaaaaaacgtctct
ctagaagctgggtacatggatacacacatactctatgtatgtgtgtatat
atataataacatacatacatacatacacacacacacacactataatccta
gctacttggcaggttgaggcaggaggaatctcaaggttgactgtatagcc
aggcctcatcgtaaaaccacaacaaaaacttttccaggacttaagagttg
ccacagaagggaacagggtcatggtcttcagcctgatttaaaacaaaaca
aagctagctgggcataatgatgaatggctttaatcccagcatttaggagg
cagaaaccaacctggtctacatagagagctccaagccagccagggataca
cggtaagaccctgtctcaaaaatactaagtaagacaggtgtaatggtgca
tacctttaattccagctctcaggaagcagaggcaggcagatctctgtgag
ttcagtgccagccttgtgtacataatgtgttttaggatagccaaggagac
atagagagaccctgattcaaaaccgtattaataaataaaacactgaattg
aaactattataatttgtcaggttcaaagtttcatagatcagttgcagacg
ggcataggtgattgtttgatatactgtgtaagtgtgtgtgtgtatgtgtg
tatgtatgtatgtatatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_81960585_81961447
seq2: B6Ng01-341I22.g_67_929

seq1  GAATTCCAGTAACAAGATGAAGACTTAATTTTTTTCATTGTTTTCTAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTAACAAGATGAAGACTTAATTTTTTTCATTGTTTTCTAGAT  50

seq1  AAAGGTTATTAAATCTAGATTAAAGGATTTTTGTTTATTAAATGTAGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTATTAAATCTAGATTAAAGGATTTTTGTTTATTAAATGTAGCAT  100

seq1  TTGTTTATTTGTACACACATGGAGAGTAGGGGCTCCATCAGATAATATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATTTGTACACACATGGAGAGTAGGGGCTCCATCAGATAATATCT  150

seq1  CTAAACCAAGACTGTTAAACTGGCCAGTCCAAAAACAAAAAAACGTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACCAAGACTGTTAAACTGGCCAGTCCAAAAACAAAAAAACGTCTCT  200

seq1  CTAGAAGCTGGGTACATGGATACACACATACTCTATGTATGTGTGTATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGCTGGGTACATGGATACACACATACTCTATGTATGTGTGTATAT  250

seq1  ATATAATAACATACATACATACATACACACACACACACACTATAATCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATAACATACATACATACATACACACACACACACACTATAATCCTA  300

seq1  GCTACTTGGCAGGTTGAGGCAGGAGGAATCTCAAGGTTGACTGTATAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTGGCAGGTTGAGGCAGGAGGAATCTCAAGGTTGACTGTATAGCC  350

seq1  AGGCCTCATCGTAAAACCACAACAAAAACTTTTCCAGGACTTAAGAGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTCATCGTAAAACCACAACAAAAACTTTTCCAGGACTTAAGAGTTG  400

seq1  CCACAGAAGGGAACAGGGTCATGGTCTTCAGCCTGATTTAAAACAAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAAGGGAACAGGGTCATGGTCTTCAGCCTGATTTAAAACAAAACA  450

seq1  AAGCTAGCTGGGCATAATGATGAATGGCTTTAATCCCAGCATTTAGGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGCTGGGCATAATGATGAATGGCTTTAATCCCAGCATTTAGGAGG  500

seq1  CAGAAACCAACCTGGTCTACATAGAGAGCTCCAAGCCAGCCAGGGATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACCAACCTGGTCTACATAGAGAGCTCCAAGCCAGCCAGGGATACA  550

seq1  CGGTAAGACCCTGTCTCAAAAATACTAAGTAAGACAGGTGTAATGGTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAAGACCCTGTCTCAAAAATACTAAGTAAGACAGGTGTAATGGTGCA  600

seq1  TACCTTTAATTCCAGCTCTCAGGAAGCAGAGGCAGGCAGATCTCTGTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTAATTCCAGCTCTCAGGAAGCAGAGGCAGGCAGATCTCTGTGAG  650

seq1  TTCAGTGCCAGCCTTGTGTACATAATGTGTTTTAGGATAGCCAAGGAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGCCAGCCTTGTGTACATAATGTGTTTTAGGATAGCCAAGGAGAC  700

seq1  ATAGAGAGACCCTGATTCAAAACCGTATTAATAAATAAAACACTGAATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAGACCCTGATTCAAAACCGTATTAATAAATAAAACACTGAATTG  750

seq1  AAACTATTATAATTTGTCAGGTTCAAAGTTTCATAGATCAGTTGCAGACG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATTATAATTTGTCAGGTTCAAAGTTTCATAGATCAGTTGCAGACG  800

seq1  GGCATAGGTGATTGTTTGATATACTGTGTAAGTGTGTGTGTGTATGTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGGTGATTGTTTGATATACTGTGTAAGTGTGTGTGTGTATGTGTG  850

seq1  TATGTATATATGT  863
      ||||||| |||||
seq2  TATGTATGTATGT  863