BAC Information

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BAC

Clone NameB6Ng01-341P21
Chromosome12 (Build37)
Map Location 98,447,431 - 98,564,701
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039664, EG628277
Downstream geneLOC382626, LOC100039743, LOC667732, LOC628351, LOC100039770, LOC667746, Galc, Gpr65
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341P21.bB6Ng01-341P21.g
ACCGA125214GA125215
length1,059587
definitionB6Ng01-341P21.b B6Ng01-341P21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,447,431 - 98,448,491)(98,564,116 - 98,564,701)
sequence
gaattctgtagttgcttttggagcaggtatttgttttgcttcccaatcca
tgattttttttttttttttttactgattcattcaaattattggtagagtt
gatggtatttatccccacaaagcttagtatgttaaagtagaagccttgat
tattgtatcttctatctacattaagaattccctttgtctctatgtcagcc
cctaacccagcccctaaagattccgaaacagattttcattttggtatctc
cctacatgttagacctttattttaattaaaataaaagagagacggacaga
cagacaaacacaaacacacacacggagagagagtcagacagacagataga
cagacagagacaaacagaggcagagagagacacagagaaagacacaaaga
gagaatgcatgttttcaggtacatataggccagaaaagaacatcagatct
catggtgctctggaaagatatgtgaatcaaaagccagtcctctgcaagag
cagcaagatctcttagatgctaatccatccctccacccctatgtcagatg
tccatattgccattatacagtgaggcaaatgagagttcaagacctgactt
gtccacattattaatgctgaggtttagtatcagagtgttttcttccaaat
cccagcatgaaaacttaaagcagtagcctcatgctggatttcataagtac
tggatttctgcttacctaactttcatttttccattaagtaaaatcatttt
atttgcaatcaatgtctttcacacttgggatcaagagtcattctgtgact
ttaagctttaaaattgtttgtaacaaaatgggggaataaagggtgactat
tacaaaagtgtaaatgtttaatatatagaccaaggaaaattgtcatttta
ctgcatgtcttgagcccttagtaaatacgacaggtgtcagcagcagcaag
gtatccctgggagtctctgtcttatgacacagctgtccaccattaaatgc
tttagaacatgctcagttttagagcattgaatgactattattggggagta
tagacgaag
gaattcatagctacagtgggttcagctggtatgaagtggatgctttgcta
atttcaatataaaagaagaagcttaagtgagtaaacatcatatattttag
ggatatggtggttttcattttcagaaattcaaatcaaaataacttactga
ttaaacatatattctaccagcacagtgcactagactaaaacttgtccaag
gcactaccatacaagcctgtctaaaccctaaaagaagtgaatcaagtttt
gttaatctatagttagtaaaaataacatccccaaatctagattgtccttg
tttttcctattgggatattttactaatatttaattattttgacactttgt
agaccagttaatttgtagtagacagtattgagaataacagaccaggggtt
tatgtatgttaagagggataaagaaaaagaatgtagtgatgagtgtggag
aaaggagaaaggagaaatgaaaacaaaagagcaagacatgagaatggaga
tttggagagacaaagagaaagtattcatgaggaaagcaaaggtttaagtt
tgaagaaaagttaagggaaggagaggagagagggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_98447431_98448491
seq2: B6Ng01-341P21.b_48_1106

seq1  GAATTCTGTAGTTGCTTTTGGAGCAGGTATTTGTTTTGCTTCCCAATCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGTTGCTTTTGGAGCAGGTATTTGTTTTGCTTCCCAATCCA  50

seq1  TGATTTTTTTTTTTTTTTTTTACTGATTCATTCAAATTATTGGTAGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTTTTTTTTTTTTTTACTGATTCATTCAAATTATTGGTAGAGTT  100

seq1  GATGGTATTTATCCCCACAAAGCTTAGTATGTTAAAGTAGAAGCCTTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTATTTATCCCCACAAAGCTTAGTATGTTAAAGTAGAAGCCTTGAT  150

seq1  TATTGTATCTTCTATCTACATTAAGAATTCCCTTTGTCTCTATGTCAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTATCTTCTATCTACATTAAGAATTCCCTTTGTCTCTATGTCAGCC  200

seq1  CCTAACCCAGCCCCTAAAGATTCCGAAACAGATTTTCATTTTGGTATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACCCAGCCCCTAAAGATTCCGAAACAGATTTTCATTTTGGTATCTC  250

seq1  CCTACATGTTAGACCTTTATTTTAATTAAAATAAAAGAGAGACGGACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATGTTAGACCTTTATTTTAATTAAAATAAAAGAGAGACGGACAGA  300

seq1  CAGACAAACACAAACACACACACGGAGAGAGAGTCAGACAGACAGATAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAACACAAACACACACACGGAGAGAGAGTCAGACAGACAGATAGA  350

seq1  CAGACAGAGACAAACAGAGGCAGAGAGAGACACAGAGAAAGACACAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGAGACAAACAGAGGCAGAGAGAGACACAGAGAAAGACACAAAGA  400

seq1  GAGAATGCATGTTTTCAGGTACATATAGGCCAGAAAAGAACATCAGATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGCATGTTTTCAGGTACATATAGGCCAGAAAAGAACATCAGATCT  450

seq1  CATGGTGCTCTGGAAAGATATGTGAATCAAAAGCCAGTCCTCTGCAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGCTCTGGAAAGATATGTGAATCAAAAGCCAGTCCTCTGCAAGAG  500

seq1  CAGCAAGATCTCTTAGATGCTAATCCATCCCTCCACCCCTATGTCAGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGATCTCTTAGATGCTAATCCATCCCTCCACCCCTATGTCAGATG  550

seq1  TCCATATTGCCATTATACAGTGAGGCAAATGAGAGTTCAAGACCTGACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATTGCCATTATACAGTGAGGCAAATGAGAGTTCAAGACCTGACTT  600

seq1  GTCCACATTATTAATGCTGAGGTTTAGTATCAGAGTGTTTTCTTCCAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACATTATTAATGCTGAGGTTTAGTATCAGAGTGTTTTCTTCCAAAT  650

seq1  CCCAGCATGAAAACTTAAAGCAGTAGCCTCATGCTGGATTTCATAAGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCATGAAAACTTAAAGCAGTAGCCTCATGCTGGATTTCATAAGTAC  700

seq1  TGGATTTCTGCTTACCTAACTTTCATTTTTCCATTAAGTAAAATCATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTCTGCTTACCTAACTTTCATTTTTCCATTAAGTAAAATCATTTT  750

seq1  ATTTGCAATCAATGTCTTTCACACTT-GGATCAAGAGTCATTCTGTGACT  799
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATTTGCAATCAATGTCTTTCACACTTGGGATCAAGAGTCATTCTGTGACT  800

seq1  TTAAGCTTTAAAATTGTTTGTAACAAAAT-GGGGAATAAA-GGTGACTAT  847
      ||||||||||||||||||||||||||||| |||||||||| |||||||||
seq2  TTAAGCTTTAAAATTGTTTGTAACAAAATGGGGGAATAAAGGGTGACTAT  850

seq1  TACAAAAGTGTAAATGTTTAATATATAGA-CAAGGAAAATTGTCA-TTTA  895
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  TACAAAAGTGTAAATGTTTAATATATAGACCAAGGAAAATTGTCATTTTA  900

seq1  CTGCATGTCTTGAG-CCTTAGTAAATACGACA-GTGTCAGCAGCAGC-AG  942
      |||||||||||||| ||||||||||||||||| |||||||||||||| ||
seq2  CTGCATGTCTTGAGCCCTTAGTAAATACGACAGGTGTCAGCAGCAGCAAG  950

seq1  GTATCCCT-GGAGTCTCTGTCCTTTATGAACACAGCTGTCAACCAATAAA  991
      |||||||| ||||||||||||  ||||| ||||||||||| |||| ||||
seq2  GTATCCCTGGGAGTCTCTGTC--TTATG-ACACAGCTGTCCACCATTAAA  997

seq1  TGCTTTAGAACAATGCTTCAGTTTTAGAGAAATGAAAATGACTTATGGTT  1041
      ||||||||||| |||| |||||||||||| | ||  |||||| |||  ||
seq2  TGCTTTAGAAC-ATGC-TCAGTTTTAGAGCATTG--AATGAC-TATTATT  1042

seq1  GGGGAAGTAATAGACAGAAG  1061
      |||| ||| |||||| ||||
seq2  GGGG-AGT-ATAGAC-GAAG  1059

seq1: chr12_98564116_98564701
seq2: B6Ng01-341P21.g_69_654 (reverse)

seq1  CTCCCTCTCTCCTCTCCTTCCCTTAACTTTTCTTCAAACTTAAACCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTCTCCTCTCCTTCCCTTAACTTTTCTTCAAACTTAAACCTTTG  50

seq1  CTTTCCTCATGAATACTTTCTCTTTGTCTCTCCAAATCTCCATTCTCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTCATGAATACTTTCTCTTTGTCTCTCCAAATCTCCATTCTCATG  100

seq1  TCTTGCTCTTTTGTTTTCATTTCTCCTTTCTCCTTTCTCCACACTCATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTCTTTTGTTTTCATTTCTCCTTTCTCCTTTCTCCACACTCATCA  150

seq1  CTACATTCTTTTTCTTTATCCCTCTTAACATACATAAACCCCTGGTCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTCTTTTTCTTTATCCCTCTTAACATACATAAACCCCTGGTCTGT  200

seq1  TATTCTCAATACTGTCTACTACAAATTAACTGGTCTACAAAGTGTCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCAATACTGTCTACTACAAATTAACTGGTCTACAAAGTGTCAAAA  250

seq1  TAATTAAATATTAGTAAAATATCCCAATAGGAAAAACAAGGACAATCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAATATTAGTAAAATATCCCAATAGGAAAAACAAGGACAATCTAG  300

seq1  ATTTGGGGATGTTATTTTTACTAACTATAGATTAACAAAACTTGATTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGGATGTTATTTTTACTAACTATAGATTAACAAAACTTGATTCAC  350

seq1  TTCTTTTAGGGTTTAGACAGGCTTGTATGGTAGTGCCTTGGACAAGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTAGGGTTTAGACAGGCTTGTATGGTAGTGCCTTGGACAAGTTTT  400

seq1  AGTCTAGTGCACTGTGCTGGTAGAATATATGTTTAATCAGTAAGTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAGTGCACTGTGCTGGTAGAATATATGTTTAATCAGTAAGTTATTT  450

seq1  TGATTTGAATTTCTGAAAATGAAAACCACCATATCCCTAAAATATATGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGAATTTCTGAAAATGAAAACCACCATATCCCTAAAATATATGAT  500

seq1  GTTTACTCACTTAAGCTTCTTCTTTTATATTGAAATTAGCAAAGCATCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTCACTTAAGCTTCTTCTTTTATATTGAAATTAGCAAAGCATCCA  550

seq1  CTTCATACCAGCTGAACCCACTGTAGCTATGAATTC  586
      ||||||||||||||||||||||||||||||||||||
seq2  CTTCATACCAGCTGAACCCACTGTAGCTATGAATTC  586