BAC Information

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BAC

Clone NameB6Ng01-347J24
Chromosome12 (Build37)
Map Location 61,885,230 - 61,885,678
singlet/doubletsinglet
Overlap genenone
Upstream geneEG622488, LOC665665, Ppia-ps12_475.1
Downstream geneLOC100040300, LOC665677, Nanog-ps2, Lrfn5, LOC665699
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347J24.bB6Ng01-347J24.g
ACCGA129171GA129172
length1,051445
definitionB6Ng01-347J24.b B6Ng01-347J24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagctctatagcccatttttaaattggatttatttagt
tttctggagtctgagtgcttgagttctttttatattttgcatattagtcc
tctgcaggatgtagggttagtaaaaatctttcccttatctgcagactgct
attttgtcctattgacagggtcctttgccttacaaaagcttttcagttaa
atgagttcccatttgttaattgttgatcttagatcctgaaccaatttttg
ttcggtccaggaaaatttcccctatgtcaatatagtcaaggctctttccc
actttctcttcgattagattcagcaaatctggttttatgtggaggtcctt
gatccacttggacttgagttttgtacaaggagataaaaatagattaatta
gccttcttctacttactgactgccagttaagccagcaccacttgttgatt
cttttatcactgtatggttttggcttctttgtcaaaattaggtgaccata
gatgtgtgggtttatttctggattttcaattctattctatcgatcgatct
ctctatctctgtactcccaataccatatgatttttaccactattgctctt
taatagaccttgaaatcagggatggtgattccccaaaaagtgcctttata
gttgagaattattttgctcttatggattttttgttattccatatgaagtt
gaaaattgctccttctacccagatgtagctgtctcttgtgatactatgcc
ggggcctagcaaacacagaagtggatgctcacagtcagctaatggatgga
tcacagggctcccaatggaggagctagagaaagtacccaaggagctaaag
ggaactgcaaccctataggtgggaacacattatgaactaaccagtatccc
ggagctcttgactctagctgcatatgtatcaaaggatggcctagtcgcca
tcactgcaagagaggcccattggacttgcaaacttttatatgctccagta
caggggaaccgccaagggcccaaaagggcgagagtgggttggggtaggga
a

gaattccattttgcttatctgtacttatcattattggacattatgtttgt
gattcatgtgttcttgtccactaaattgcctctccagccctctgaatatt
ttacttatttatatttaagaataattatatatataatacatatatatata
tatatacatatatatgtcattctctatctgtctatctatctatctatcta
tctatctatcgatatatatatatatatatatatatatatatatatatata
tatatatatagacagtcactctctagacagataaataagtatatagacag
atgatagatgataatatagaaataggtatagatacagctatagctatggc
tatggccatggctgtagctttagatatagatatagagaaagagattttat
atatatatatatatatatatatatatatatatatatatatatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_61885230_61885678
seq2: B6Ng01-347J24.g_66_510

seq1  GAATTCCATTTTGCTTATCTGTACTTATCATTATTGGACATTATGTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTTGCTTATCTGTACTTATCATTATTGGACATTATGTTTGT  50

seq1  GATTCATGTGTTCTTGTCCACTAAATTGCCTCTCCAGCCCTCTGAATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATGTGTTCTTGTCCACTAAATTGCCTCTCCAGCCCTCTGAATATT  100

seq1  TTACTTATTTATATTTAAGAATAATTATATATATAATACATATATATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTATTTATATTTAAGAATAATTATATATATAATACATATATATATA  150

seq1  TATATACATATATATGTCATTCTCTATCTGTCTATCTATCTATCTATCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACATATATATGTCATTCTCTATCTGTCTATCTATCTATCTATCTA  200

seq1  TCTATCTATCGATATATATATATATATATATATATATATATATATATATA  250
      |||||||||||    |||||||||||||||||||||||||||||||||||
seq2  TCTATCTATCG----ATATATATATATATATATATATATATATATATATA  246

seq1  TATATATATATATAGACAGTCACTCTCTAGACAGATAAATAAGTATATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATAGACAGTCACTCTCTAGACAGATAAATAAGTATATAG  296

seq1  ACAGATGATAGATGATAATATAGAAATAGGTATAGATACAGCTATAGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGATAGATGATAATATAGAAATAGGTATAGATACAGCTATAGCTA  346

seq1  TGGCTATGGCCATGGCTGTAGCTTTAGATATAGATATAGAGAAAGAGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATGGCCATGGCTGTAGCTTTAGATATAGATATAGAGAAAGAGATT  396

seq1  TTATATATATATATATATATATATATATATATATATATATATATATATG  449
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATATATATATATATATATATATATATATATATATATATATATG  445


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