Query= MSMg01no045_c11.b1 MSMg01no045_c11.b1 CHROMAT_FILE:
MSMg01no045_c11.b1 PHD_FILE: MSMg01no045_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:02 2005
(626 letters)
>mm_chr12_8785689_8786715
Length = 1027
Score = 1093 bits (565), Expect = 0.0
Identities = 601/621 (96%), Gaps = 14/621 (2%)
Strand = Plus / Plus
Query: 6 ggaattcactggttggggacttgagtgtatcagaggggcacaaagtaacattaactctgg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcactggttggggacttgagtgtatcagaggggcacaaagtaacattaactctgg 265
Query: 66 tatcctctgcagcaaatcggagatcccctctcctaggcgagttctcagtggatatggagg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tatcctctgcagcaaatcggagatcccctctcctaggcgagttctcagtggatatggagg 325
Query: 126 tcaggtttgggcttgtagggccccagcaagagtcgttgatgtcactccagcttctcccga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tcaggtttgggcttgtagggccccagcaagagtcgttgatgtcactccagcttctcccga 385
Query: 186 ggaagatgaggggatgtgttgagggtgcagtgttgggatcacatctctccctgaatggca 245
|||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 386 ggaaga-------------tgagggtgctgtgttgggatcacatctctccctgaatggca 432
Query: 246 tgttggggagggatgaagcccttgcttctgacccctaagcttggtctttaggtggccaca 305
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tgttggggagggatggagcccttgcttctgacccctaagcttggtctttaggtggccaca 492
Query: 306 gtctctgggttctgtcctacctccctgcccttgtgtgcttcaaaggcatgctaaagggac 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gtctctgggttctgtcctacctccctgcccttgtgtgcttcaaaggcatgctaaagggac 552
Query: 366 tctcggccattccgaatgggcacagtgttccttctgttctcccacccctagaaggaggca 425
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 553 tctcggccattccgaatgggcacagtgttccttctgttctcccacccccagaaggaggca 612
Query: 426 ggcctggattgtagattcctagaagtaagtggccctgagcatgctgttgatgaacctggg 485
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ggcctggattgtagattcctagaagtaagtggccctgagcatgctgttgatgaacctgga 672
Query: 486 accgggcaggctgggcatcctaggacctgtctttccatagaagtctgaatcagtctacct 545
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 accaggcaggctgggcatcctaggacctgtctttccatagaagtctgaatcagtctacct 732
Query: 546 ttgggactgagtaagggactcctcacatatcagctggctagtccatcttggctgatctaa 605
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ttgggactgagtaaggggctcctcacatatcagctggctagtccatcttggctgatctaa 792
Query: 606 actcacattaggctgaagaga 626
|| ||||||||||||||||||
Sbjct: 793 ac-cacattaggctgaagaga 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1027
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1017
Effective search space: 626472
Effective search space used: 626472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no045_c11.g1 MSMg01no045_c11.g1 CHROMAT_FILE:
MSMg01no045_c11.g1 PHD_FILE: MSMg01no045_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:02 2005
(445 letters)
>mm_chr12_8814471_8815315
Length = 845
Score = 837 bits (433), Expect = 0.0
Identities = 442/445 (99%)
Strand = Plus / Minus
Query: 1 gaagtgccagcgcagtactgagttaaagttgtgcaaagtcctcgtggactctgtcacaca 60
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 645 gaagtgccagcgcagtactgagttaaagttgtgccaagtcctcatggactctgtcacaca 586
Query: 61 aggtatggacaacccagcagacatgatggtgttgactgggagcatgaagaatttttgagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aggtatggacaacccagcagacatgatggtgttgactgggagcatgaagaatttttgagg 526
Query: 121 ttcattgctgtgggtacaggtaggggagccagggttgagcccaccccatctactatagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ttcattgctgtgggtacaggtaggggagccagggttgagcccaccccatctactatagca 466
Query: 181 tcatttattcaggagagtgatggtaaaggcctgagaaaccttctgggacccacccaaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tcatttattcaggagagtgatggtaaaggcctgagaaaccttctgggacccacccaaccc 406
Query: 241 tgtgcaggataccagagcagctccagttggaggccctttagagtttctgctttcccggtt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 405 tgtgcaggataccagagcagctccagttggaggccctttagagtttctgctttcccagtt 346
Query: 301 ccctgagggagattgggcgcagaagcctttaccgggaagatctgcttcctcttgggattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ccctgagggagattgggcgcagaagcctttaccgggaagatctgcttcctcttgggattt 286
Query: 361 cccagtaacctccctcaggtcatcaggcagcttcacacactgctgcagttcaaagaggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 cccagtaacctccctcaggtcatcaggcagcttcacacactgctgcagttcaaagaggct 226
Query: 421 aggaaaattagagtcctgtatccca 445
|||||||||||||||||||||||||
Sbjct: 225 aggaaaattagagtcctgtatccca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
