Query= MSMg01no046_h22.b1 MSMg01no046_h22.b1 CHROMAT_FILE:
MSMg01no046_h22.b1 PHD_FILE: MSMg01no046_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:40 2005
(622 letters)
>mm_chr12_71098748_71099770
Length = 1023
Score = 1181 bits (611), Expect = 0.0
Identities = 617/619 (99%), Gaps = 1/619 (0%)
Strand = Plus / Minus
Query: 5 gaattcctttctgacctc-acctcctgttcctgccctcccgcttccccactccaatcaat 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gaattcctttctgaccacaacctcctgttcctgccctcccgcttccccactccaatcaat 627
Query: 64 ctggcctttgtcttcattgttatttctaggtcctcagtgctgagttgcatgaactaaaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ctggcctttgtcttcattgttatttctaggtcctcagtgctgagttgcatgaactaaaca 567
Query: 124 acatcaccagccgaaggcgtgtatgtcctgctcagacctgccttgaccaagaacgtgact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 acatcaccagccgaaggcgtgtatgtcctgctcagacctgccttgaccaagaacgtgact 507
Query: 184 taggtgaagctttaaagatatgaggctcttaaagataaatacttaaagatgtgttcacac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 taggtgaagctttaaagatatgaggctcttaaagataaatacttaaagatgtgttcacac 447
Query: 244 gggaaaacttggagcaaagtctggcttaaaattatttttccattgctttccccaccctcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gggaaaacttggagcaaagtctggcttaaaattatttttccattgctttccccaccctcc 387
Query: 304 agaggttttcctatatgctaaagcatattcaacatttaatgtctattttttttcccaatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agaggttttcctatatgctaaagcatattcaacatttaatgtctattttttttcccaatt 327
Query: 364 acttctgacagttctaagttcttttaagtcgtgatatggggggtggaaaccatgtaactt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 acttctgacagttctaagttcttttaagtcgtgatatggggggtggaaaccatgtaactt 267
Query: 424 agcttgctaggcacactctctctactgtaccacttcccagtccctccagaactagtatgg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 agcttgctaggcacactctctctactgtaccacttcccagtccctccagaactagtatgg 207
Query: 484 aatctgcatgttctacaactaaagcctgtgatctcatcaggagcagggtattacatagtt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aatctgcatgttctacaactaaagcctgtgatctcatcaggagcagggtattacatagtt 147
Query: 544 ccattagacaaccagcagcaggatcaatagcctatagtgtttgtgggttatggtggtttg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ccattagacaaccagcagcaggatcaatagcctatagtgtttgtgggttatggtggtttg 87
Query: 604 aataaaaatggacttcata 622
|||||||||||||||||||
Sbjct: 86 aataaaaatggacttcata 68
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1023
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1013
Effective search space: 619956
Effective search space used: 619956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_h22.g1 MSMg01no046_h22.g1 CHROMAT_FILE:
MSMg01no046_h22.g1 PHD_FILE: MSMg01no046_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:40 2005
(594 letters)
>mm_chr12_70945963_70946956
Length = 994
Score = 1149 bits (594), Expect = 0.0
Identities = 594/594 (100%)
Strand = Plus / Plus
Query: 1 acctttaagagagaaaggtcaacttgcccctgaatatatgtgcagtgtatgtgtgtgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctttaagagagaaaggtcaacttgcccctgaatatatgtgcagtgtatgtgtgtgaat 260
Query: 61 gttcacccccgcacatgtgtgcagtgtttacctttcacatgtgtacaatgtatgagagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttcacccccgcacatgtgtgcagtgtttacctttcacatgtgtacaatgtatgagagtc 320
Query: 121 tgcttgccctgtgcatgtgtgcagagggctgtcttcctttactgttctccatcttctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcttgccctgtgcatgtgtgcagagggctgtcttcctttactgttctccatcttctttt 380
Query: 181 gggggacagggtctcacatggaacccggagctttgttttgtctagaaaggctgcccagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggggacagggtctcacatggaacccggagctttgttttgtctagaaaggctgcccagta 440
Query: 241 aaactccgggggatctgcctatccctgacaccccagcacgtgagttcaggtacgtggtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaactccgggggatctgcctatccctgacaccccagcacgtgagttcaggtacgtggtgt 500
Query: 301 cacgcccagcttttataagggtgctaagcctaggtctataattgtgtgcacagtgaggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacgcccagcttttataagggtgctaagcctaggtctataattgtgtgcacagtgaggca 560
Query: 361 tcaccgcagacccccgagcaggtttatgacattatttctgagccccttacagtacttttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaccgcagacccccgagcaggtttatgacattatttctgagccccttacagtacttttg 620
Query: 421 ctagtgtgatacaggtgaaaatgagctaataaccccgagtaatcagtacttcatcttccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctagtgtgatacaggtgaaaatgagctaataaccccgagtaatcagtacttcatcttccc 680
Query: 481 aaagtgatgtgagtaatgacaacacctcattggatgcaggtcaaacataggcggctgcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaagtgatgtgagtaatgacaacacctcattggatgcaggtcaaacataggcggctgcag 740
Query: 541 ttctcccagctcgattgctgttattccgacggcccagatatcacagagttggtt 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttctcccagctcgattgctgttattccgacggcccagatatcacagagttggtt 794
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
