Query= MSMg01no049_f23.b1 MSMg01no049_f23.b1 CHROMAT_FILE:
MSMg01no049_f23.b1 PHD_FILE: MSMg01no049_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:11:19 2005
(282 letters)
>mm_chr12_32261188_32261869
Length = 682
Score = 493 bits (255), Expect = e-144
Identities = 275/287 (95%), Gaps = 10/287 (3%)
Strand = Plus / Minus
Query: 1 tataaaattcacataatatatatgaatatataccatataaaattcacccccc-----ata 55
|||||||||||||||||||||||||||||||| |||||||||||| | |||
Sbjct: 587 tataaaattcacataatatatatgaatatataaaatataaaattca-----cataatata 533
Query: 56 tatgaatatataaaaatataaaattcatataatatatgaatatatttaaagtgtcttaca 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tatgaatatataaaaatataaaattcatataatatatgaatatatttaaagtgtcttaca 473
Query: 116 gtaggtttttcagatggctttttcttacatcctagtttttgctaacacccccttcttctc 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gtaggtttttcagatggctttttcttacatcctagtttttgctaacacccccttcttctc 413
Query: 176 catcttcctgctcccatttccacctagacctttttgctctaatattctctatttttatat 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 catcttcctgctcccatttccacctagacctttttgctctaatattctctatttttatat 353
Query: 236 ctctatgtcccaatccccacttcttctcaaggacttgacctccacgt 282
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ctctatgtcccaatccccacttcttctcaaggacttgacctccacgt 306
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no049_f23.g1 MSMg01no049_f23.g1 CHROMAT_FILE:
MSMg01no049_f23.g1 PHD_FILE: MSMg01no049_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:11:19 2005
(128 letters)
>mm_chr12_32128714_32129241
Length = 528
Score = 224 bits (116), Expect = 1e-63
Identities = 125/128 (97%)
Strand = Plus / Plus
Query: 1 tgtgatggttgaaacagaattgtgtattccaggaaccaaacataatttttccccaaggat 60
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgatggttgaaacagaattgcggattccaggaaccaaacataatttttccccaaggat 260
Query: 61 ttctagaaagaaaagcgaaccgcgtgagtgaaaaacaaattaataaaagcacttgaattc 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctagaaagaaaagtgaaccgcgtgagtgaaaaacaaattaataaaagcacttgaattc 320
Query: 121 ttaacaaa 128
||||||||
Sbjct: 321 ttaacaaa 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 128
Length of database: 528
Length adjustment: 8
Effective length of query: 120
Effective length of database: 520
Effective search space: 62400
Effective search space used: 62400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
