Query= MSMg01no051_f21.b1 MSMg01no051_f21.b1 CHROMAT_FILE:
MSMg01no051_f21.b1 PHD_FILE: MSMg01no051_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:57 2005
(424 letters)
>mm_chr12_97560927_97561751
Length = 825
Score = 717 bits (371), Expect = 0.0
Identities = 398/407 (97%), Gaps = 1/407 (0%)
Strand = Plus / Minus
Query: 18 gaattcgtttccaacaaaatgcatcatcccattcatctctctccattcaactacatccca 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gaattcgtttccaacaaaatgcatcatcccattcatctctctccattcaactacatccca 565
Query: 78 tggttctgtgccatttaagcacctgccagttttccctcttggcagattcttggcctcaga 137
||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 564 tggttctgtgccatttaagcatctggtagttttccctcttggcagattcttggcctcaga 505
Query: 138 atagctattttagtgttttagtagaattaagaacatta-ttttttttcaaaggtgaggag 196
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 504 atagctattttagtgttttagtagaattaagaacattatttttttttcaaaggtgaggag 445
Query: 197 ggcttagacgaaaacttaatgtaacttatattccctgccaaagaaacgctctgagtttag 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggcttagacgaaaacttaatgtaacttatattccctgccaaagaaacgctctgagtttag 385
Query: 257 gaggtaaatctcagagctcctgccctccccttcaggtttcatgcttgttacaaatgtaaa 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaggtaaatctcagagctcctgccctccccttcaggtttcatgcttgttacaaatgtaaa 325
Query: 317 tcttcagagtgcatttgtgtggactttgaatatgagagcacaatgcagttattgtcttaa 376
||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 324 tctccagagtgcatttgtgtggactttgaatatgagagcacaatgcagttattgccagaa 265
Query: 377 gatgccaataaatagcaggatttttaatgtccgggtagtgtttccct 423
||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 264 gatgccaataaatagcaggatttttaatgtctgggtagtgtttccct 218
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 825
Length adjustment: 9
Effective length of query: 415
Effective length of database: 816
Effective search space: 338640
Effective search space used: 338640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no051_f21.g1 MSMg01no051_f21.g1 CHROMAT_FILE:
MSMg01no051_f21.g1 PHD_FILE: MSMg01no051_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:57 2005
(577 letters)
>mm_chr12_97532898_97533874
Length = 977
Score = 1052 bits (544), Expect = 0.0
Identities = 568/576 (98%)
Strand = Plus / Plus
Query: 2 ttcagatttttgtgtccattttgctttcattgaacatacacataattagtatttttggag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttcagatttttgtgtccattttgctttcattgaacatacacataattagtatttttggag 261
Query: 62 gcttgtctgaaatgttatgtaactcactatagtagagtacaattaaatttagctctttct 121
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 262 gcttgtctgaaatgttatgtaacccactatagtagagtacaattaaatttagctctttct 321
Query: 122 agacagtctagactctaaactttttcttgcactttatgttcattttatctctgtattgta 181
|||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||
Sbjct: 322 agacagtctagactctaaacattttcttgtattttatgttcattttatctctgtattgta 381
Query: 182 tctggattgtgatgaaagctacttcctgtgattattttttccttttcatgcttccttttt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tctggattgtgatgaaagctacttcctgtgattattttttccttttcatgcttccttttt 441
Query: 242 tcccctttgttgaattagtcatgtggttaatattttcacttatttcctttctctcaaatt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tcccctttgttgaattagtcatgtggttaatattttcacttatttcctttctctcaaatt 501
Query: 302 gtcactagaatggactgttcttaaaggttagcattccagttttctttaaataatatcttt 361
||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 502 gtcactaaaatggactgttcttaaagggtagaattccagttttctttaaataatatcttt 561
Query: 362 atttaatatgttgattataacctgaataattccatatgatatgtcttatcaccacttctg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 atttaatatgttgattataacctgaataattccatatgatatgtcttatcaccacttctg 621
Query: 422 ccatttgtaactatcttgagacaaaatacctctgtgctctacctttaaatcctatcttgt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ccatttgtaactatcttgagacaaaatacctctgtgctctacctttaaatcctatcttgt 681
Query: 482 ttccattagcatcttgttccattaccaggcaaacagaactttgttttgatattgaaggaa 541
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 682 ttccattagcatcttgttccattaccagggaaacagaactttgttttgatattgaaggaa 741
Query: 542 gaacctttcctgcaggtacactttttttttgagaaa 577
||||||||||||||||||||||||||||||||||||
Sbjct: 742 gaacctttcctgcaggtacactttttttttgagaaa 777
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
