XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCC
ATGGTAAACTCAGAGAATTTACAGGCTACCTAGACATCCCTTTCAGAAAT
GATCTAGACATATTTTATTTCTGTTTTTTTTTTCATTTGTTCAGATACCA
TATGAAGACCATGAAAGGAAACGGAAAAATACAAGAATAAGATAAGGAAT
GGAAGGAGAGGCAGAAACCAGGAGTTTGAAACACTGAGAGCCAGTATGAG
ACTTTGCTCTGTCTCTGTCCTTGAGCAATGAATGATACAGCAGAGGCCCT
GACTCAAACCCCATGGAAAAATGAACAAAGGAATAAGGAGAAAGAACCTA
AGTACCAAAGCCTGGTGTTACTTCTGCCATAGTATGAAACTGTTAGAGTA
TCCCAGGGCTAAGATTTCTGACCAGCCCCCACACCCATCTCTATAACCCT
CTGGGCCACTACATGATGACTGCTGGATTGTGGGAAGGAGGTGGAACCTT
CCACTTTGTTCTACAGTTAGGTAGTTAGGTAAGGTTGTATATGTTTGGTA
ATGTCCTTGCTTTTGTAGGTCTCTGCCCCTCTACCTGCACTTTTCTGGAG
ACATCTGTGCTCCGTGATTCAGAACAACAGAACAAGCCACCTTTCCTCTC
ACTGTGAACCAGTTGAGGGGCACAGTTGAGAATGGAGGGATCCTGAGGTC
CACTGAGGTCTAGTA

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTTTTTTCTCTACTCTTGGCTGTAGCTGTGATGT
GGCCAACTGCCTGAGTTCCCGTCTTGACTTCCCAGAAATGATGGGCAATA
ACCTGGGAAACTGTAAGTCAAGTAAGCCATTTCATCGTAGATATTGTTTT
GGCCAGAGTGTTTTAGCCATAGCAGCAGAAATGAAACTGTAACAGTGCTT
CTTAACCAATATCTGTCTATGTCTGGTCATCACTTCTCAGCTCCTATGAG
ATTAACTTTTTAAAAAAAATTGTTTATGTGAGAGACATTACATGGTGTTT
GTGTTTCTGCATGTGGCTTATTTCACTGAACAGAGCATTTTCTAGTTCCA
TTTAAGTTGATAGCAATTTATTGGTACATACATTTCACTTATCTATCCAG
CCATTGAGGAACATTTAGGTTGATTGCATATCTTGGCTATTAGGAATAAT
GCTAGAATATGGAAACCTTTGCCATTCTGATGTGTCTTCTTCATCTCTAT
AACCAAGGCTATGATTATTGTATTGCAAAGTGTTATTATTATTATTATTA
TTATTATTATTATTATTATTATTATTATTGGTTTTAGATTTTTGAGACCC
TTCCATACTGTTTTCCACACAGTGTATATTCTCATGGGAACTGTATAAAT
CCTCCACTTCACAT

Query= MSMg01no052_c20.b1 MSMg01no052_c20.b1 CHROMAT_FILE:
MSMg01no052_c20.b1 PHD_FILE: MSMg01no052_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:42 2005
         (676 letters)



>mm_chr12_15923588_15924664
          Length = 1077

 Score = 1226 bits (634), Expect = 0.0
 Identities = 664/674 (98%), Gaps = 1/674 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccatggtaaactcagagaatttacaggctacctagacatccctttcagaaatga 63
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccatggtaaacagagagaatttacaggctacctagacatccctttcagaaatga 263

                                                                       
Query: 64  tctagacatattttatttctgtttttttttt-catttgttcagataccatatgaagacca 122
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 264 tctagacatattttatttctgtttttttttttcatttgttcagataccatatgaagacca 323

                                                                       
Query: 123 tgaaaggaaacggaaaaatacaagaataagataaggaatggaaggagaggcagaaaccag 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgaaaggaaacggaaaaatacaagaataagataaggaatggaaggagaggcagaaaccag 383

                                                                       
Query: 183 gagtttgaaacactgagagccagtatgagactttgctctgtctctgtccttgagcaatga 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagtttgaaacactgagagccagtatgagactttgctctgtctctgtccttgagcaatga 443

                                                                       
Query: 243 atgatacagcagaggccctgactcaaaccccatggaaaaatgaacaaaggaataaggaga 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atgatacagcagaggccctgactcaaaccccatggaaaaatgaacaaaggaataaggaga 503

                                                                       
Query: 303 aagaacctaagtaccaaagcctggtgttacttctgccatagtatgaaactgttagagtat 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aagaacctaagtaccaaagcctggtgttacttctgccatagtatgaaactgttagagtat 563

                                                                       
Query: 363 cccagggctaagatttctgaccagcccccacacccatctctataaccctctgggccacta 422
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 564 cccagggctaagatttctgaccagcccctacacccatctctataaccctctgggccacta 623

                                                                       
Query: 423 catgatgactgctggattgtgggaaggaggtggaaccttccactttgttctacagttagg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 catgatgactgctggattgtgggaaggaggtggaaccttccactttgttctacagttagg 683

                                                                       
Query: 483 tagttaggtaaggttgtatatgtttggtaatgtccttgcttttgtaggtctctgcccctc 542
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 684 tagttaggtaaggttgtatatgtttggtaatgtccttgcttttgtaggtccctgcccctc 743

                                                                       
Query: 543 tacctgcacttttctggagacatctgtgctccgtgattcagaacaacagaacaagccacc 602
           |||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 744 tacctgcactttactggtgacagctgtgctccgtgattcagaacaacagaacaagccacc 803

                                                                       
Query: 603 tttcctctcactgtgaaccagttgaggggcacagttgagaatggagggatcctgaggtcc 662
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 804 tttcctctcactgtgaaccagttgaggggcacagttgagaatggagggatgctgagatcc 863

                         
Query: 663 actgaggtctagta 676
           ||||||||||||||
Sbjct: 864 actgaggtctagta 877


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1077
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1067
Effective search space:   710622
Effective search space used:   710622
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)