Query= MSMg01no052_e19.b1 MSMg01no052_e19.b1 CHROMAT_FILE:
MSMg01no052_e19.b1 PHD_FILE: MSMg01no052_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:53 2005
(552 letters)
>mm_chr12_26924800_26925752
Length = 953
Score = 832 bits (430), Expect = 0.0
Identities = 433/434 (99%), Gaps = 1/434 (0%)
Strand = Plus / Minus
Query: 4 ggaattc-aagtgatcctctggtttcagccatccaggtcctggaattgtacatgggaaac 62
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ggaattcaaagtgatcctctggtttcagccatccaggtcctggaattgtacatgggaaac 375
Query: 63 ttggtgagttctcattctttaaccctaaccccattcatcatatactttcatgattgcata 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttggtgagttctcattctttaaccctaaccccattcatcatatactttcatgattgcata 315
Query: 123 ttattcttgtttctttggtcaacagtcttggtgttgcagtcttattgttcatttaggtta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttattcttgtttctttggtcaacagtcttggtgttgcagtcttattgttcatttaggtta 255
Query: 183 tcatgggagctcgttgatgtgtgttcctgtttgtatatgtacctcttcatgtgtatatgc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tcatgggagctcgttgatgtgtgttcctgtttgtatatgtacctcttcatgtgtatatgc 195
Query: 243 acatgtgtctggggaggtcaggggttcatgttgggtttccttcctaattgctctctactt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 acatgtgtctggggaggtcaggggttcatgttgggtttccttcctaattgctctctactt 135
Query: 303 ttcctgtttcaaggcatggtgtcttgatggtctctgtctgttgctgatttgtttaggcta 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ttcctgtttcaaggcatggtgtcttgatggtctctgtctgttgctgatttgtttaggcta 75
Query: 363 gttgtctagaaaaccccaggaaccttcctctcctgccttcccagtgctggattataagta 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gttgtctagaaaaccccaggaaccttcctctcctgccttcccagtgctggattataagta 15
Query: 423 tccactaccatgac 436
||||||||||||||
Sbjct: 14 tccactaccatgac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 953
Length adjustment: 10
Effective length of query: 542
Effective length of database: 943
Effective search space: 511106
Effective search space used: 511106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_e19.g1 MSMg01no052_e19.g1 CHROMAT_FILE:
MSMg01no052_e19.g1 PHD_FILE: MSMg01no052_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:53 2005
(589 letters)
>mm_chr12_26810770_26811758
Length = 989
Score = 1127 bits (583), Expect = 0.0
Identities = 586/587 (99%)
Strand = Plus / Plus
Query: 3 attcctttctgtttagccctcttgtgccactgctgaggggagggaaggccttgcttccct 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 attcctttctgtttagccctcttgtgccactgctgaggggagggaaggccttgcttccct 262
Query: 63 gggactcctgctgcctaactggatttcctatgtagtagaatgccaggtatatgcatacac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gggactcctgctgcctaactggatttcctatgtagtagaatgccaggtatatgcatacac 322
Query: 123 atatgcaaaagacactgaaattccaggttctcgagtcattgttggaatgaatcgaaggct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atatgcaaaagacactgaaattccaggttctcgagtcattgttggaatgaatcgaaggct 382
Query: 183 gtcaactgcacatttcctggaaggctctgctttacaacctctgaggagacacagaatgtg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtcaactgcacatttcctggaaggctctgctttacaacctctgaggagacacagaatgtg 442
Query: 243 aaggcgacttaggcagagattgataacaacagtttatattaatattccgcacgcatcctt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaggcgacttaggcagagattgataacaacagtttatattaatattccgcacgcatcctt 502
Query: 303 tcttccaaggactccagagtgcctgcaatgagattggattctgccccagtgccggttcca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tcttccaaggactccagagtgcctgcaatgagattggattctgccccagtgccggttcca 562
Query: 363 gcgggaataaatggcagagcttggcagcctcggtgcaaaccttagctctgtctccagagg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gcgggaataaatggcagagcttggcagcctcggtgcaaaccttagctctgtctccagagg 622
Query: 423 atggaaacgcagagccatacaaaggacaaactgcagcctttgttcatgtttggtctgcta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atggaaacgcagagccatacaaaggacaaactgcagcctttgttcatgtttggtctgcta 682
Query: 483 ggcaaagctcaacagctactggacccagaagcatctaggcgggtcttgctagttttgaag 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ggcaaagctcaacagctactggacccagaagcatctaggcgggtcttgctagttttgaag 742
Query: 543 gcttacctgtccatcaccatgtatgggcgtttggattgtggtgtgta 589
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 743 gcttacctgtcaatcaccatgtatgggcgtttggattgtggtgtgta 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space: 566841
Effective search space used: 566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
