Query= MSMg01no057_o02.b1 MSMg01no057_o02.b1 CHROMAT_FILE:
MSMg01no057_o02.b1 PHD_FILE: MSMg01no057_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:59 2005
(469 letters)
>mm_chr12_35404097_35404964
Length = 868
Score = 868 bits (449), Expect = 0.0
Identities = 464/469 (98%), Gaps = 1/469 (0%)
Strand = Plus / Plus
Query: 1 gagtaaacaaaattaccagttgccttgcacaagagtagagataaaaagtcttatagcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 gagtaaacaaaattaccagttgccttgcacaagagtagagataaaaagttttatagcaaa 260
Query: 61 gcatcctacaatatgtcttctttaggaaggcacctcagatttagtctcttgaaaatgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcatcctacaatatgtcttctttaggaaggcacctcagatttagtctcttgaaaatgttt 320
Query: 121 agacattcacgtgaacatagatattgaggtgattataccgattcaagagtttgcttcctg 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 321 agacattcacgtgaacatagatattgaggtgattataccgaatcaagagtttggttcctg 380
Query: 181 acatgtattcaaattcaaaactggccattggaataagatatcactaacttgctgtgtgtt 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 acatgtattcaaattcaaaactggccattggaataagatatcactagcttgctgtgtgtt 440
Query: 241 gatgtaggtgaatgtatgtgcgctgagtaggtgtataccccccagaaagcataacacata 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 gatgtaggtgaatgtatgtgcgctgagtaggtgtataccccc-agaaagcataacacata 499
Query: 301 agtcaacttcaatggttatctacatatggaaactgaaagattatcacttttatctatcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agtcaacttcaatggttatctacatatggaaactgaaagattatcacttttatctatcaa 559
Query: 361 ctgacgctaagatgttgacaacaaacttgggaaacatacagttgacggaggagcgaatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctgacgctaagatgttgacaacaaacttgggaaacatacagttgacggaggagcgaatgg 619
Query: 421 cacacatcccctaggagcaaaattgtagaactattctaactttgaagat 469
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cacacatcccctaggagcaaaattgtagaactattctaactttgaagat 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 868
Length adjustment: 10
Effective length of query: 459
Effective length of database: 858
Effective search space: 393822
Effective search space used: 393822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_o02.g1 MSMg01no057_o02.g1 CHROMAT_FILE:
MSMg01no057_o02.g1 PHD_FILE: MSMg01no057_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:59 2005
(337 letters)
>mm_chr12_35564967_35565703
Length = 737
Score = 574 bits (297), Expect = e-168
Identities = 327/337 (97%)
Strand = Plus / Minus
Query: 1 tctcccattggtgaggtttgcacctgggtacctttcaggaatgtaagacttaggagaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tctcccattggtgaggtttgcacctgggtacctttcaggaatgtaagacttaggagaaac 478
Query: 61 aaacccctgtgggcatttgcttgtgttataggctttctgtgtctgaaatccttactaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aaacccctgtgggcatttgcttgtgttataggctttctgtgtctgaaatccttactaagt 418
Query: 121 attgattgtgatttcatctgttcccagaacatcttctctgttggagagtgcgttgggctc 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 attgattatgatttcatctgttcccagaacatcttctctgttggagagtgcgttgggctc 358
Query: 181 tgagaatacggagaaagaatcagtatgtcccatgtatctgtgaaacagccgaatgggaga 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tgagaatacggaaaaagaatcagtatgtcccatgtatctgtgaaacagccgaatgggaga 298
Query: 241 gataggtattagtgatgacccaactaattacttaactagtaagaaagcaagaaggggagt 300
||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 297 gataggtattagtgatgacccaactaattacttaattagtaagaaagcaaggaggggagc 238
Query: 301 tatctaggaagaaagccagcaatctgttacggagttc 337
|| |||||||| |||| ||||||||||| |||||||
Sbjct: 237 tacctaggaaggcagccggcaatctgttatggagttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
