Query= MSMg01no059_g03.b1 MSMg01no059_g03.b1 CHROMAT_FILE:
MSMg01no059_g03.b1 PHD_FILE: MSMg01no059_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:52 2005
(585 letters)
>mm_chr12_84132012_84132996
Length = 985
Score = 1036 bits (536), Expect = 0.0
Identities = 573/586 (97%), Gaps = 4/586 (0%)
Strand = Plus / Plus
Query: 1 taaaagactttcccagcttccctcaaagcaatgagtgatctactatgacctgaccagaga 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 taaaagactttcccagcttccctcaaagcaatgaatgatctactatgacctgaccagaga 260
Query: 61 tgcgtggtaattttctcctgttgctgctgtagcaatctgtcacgaacttcaaacaatagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcgtggtaattttctcctgttgctgctgtagcaatctgtcacgaacttcaaacaatagg 320
Query: 121 aatttatcagacatttctggagggcagagtctggctgcatctccagatctggtcttctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatttatcagacatttctggagggcagagtctggctgcatctccagatctggtcttctgt 380
Query: 181 cttcaggttttgtgactctgctgtctgcctccctcccagtctgttggaaagactggacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttcaggttttgtgactctgctgtctgcctccctcccagtctgttggaaagactggacag 440
Query: 241 ttgaggttgtattcaatgatttgtgtgatcactccctcttgaggcccttagtcatacatg 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 441 ttgaggttgtattcaatgatttgtgtaatcactccctcttgaggcccttagtcatacccg 500
Query: 301 caaatcctttttgttgtatagagcaacacacctgtgattttgtggattacagcagggaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaatcctttttgttgtatagagcaacacacctgtgattttgtggattacagcagggaca 560
Query: 361 acttgagagtccttattctgtctatcacaattagaagtagactctagggctttcagaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acttgagagtccttattctgtctatcacaattagaagtagactctagggctttcagaaaa 620
Query: 421 tgtatttaaagggggcatcacctggggagaatatcctttgcctgactttcttttcctctc 480
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 tgtatttaaagggggcatcatctggggagaatatcctttgcctgtctttcttttcctctc 680
Query: 481 tttcttctgccttcttcccttctttccctcctcccttcattc-ttttcctccaggaagtg 539
| ||||||||| ||||||||||||||||||| ||||| ||| |||||||||||||||||
Sbjct: 681 t--cttctgcct-cttcccttctttccctccttccttccttccttttcctccaggaagtg 737
Query: 540 accttgaggatggaagccaaccactggttgatgaaagaggagcact 585
||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 738 accttgaggatggaagccaaccactggctgatgaaagaggagcact 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_g03.g1 MSMg01no059_g03.g1 CHROMAT_FILE:
MSMg01no059_g03.g1 PHD_FILE: MSMg01no059_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:52 2005
(576 letters)
>mm_chr12_84558486_84559461
Length = 976
Score = 961 bits (497), Expect = 0.0
Identities = 550/575 (95%), Gaps = 13/575 (2%)
Strand = Plus / Minus
Query: 1 aattcaatttaatttattcaattcaattcaattaattaatttatttatgtgtgtgtgtgt 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 769 aattcaatttaatttattcaattcaattcaattaatttatttatttatgtgtgtgtgtgt 710
Query: 61 ccacatgttggggcatggtgttcataaggaggttagtgcacaatggttctctccttctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ccacatgttggggcatggtgttcataaggaggttagtgcacaatggttctctccttctac 650
Query: 121 cacctggcattcagggattaaactcagatcttcaagcttggcagcaaacatccttattca 180
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 649 cacctggcattcagggattaaactcagatcttcaagtttggcagcaagcatccttattca 590
Query: 181 ccagcccagtctcttcttgatcaattgtccctttctagctctcagtcagaattgaaaacc 240
|| ||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||
Sbjct: 589 ccggcccagtctcttcttgatcaattatccctttctagctctcagtcggaattggaaacc 530
Query: 241 atctggagtcagagcaagcaggggataagctgagaggaagagggagatgtgtactgttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 atctggagtcagagcaagcaggggataagctgagaggaagagggagatgtgtactgttaa 470
Query: 301 actacgataggcgactatggcctctaagtcaccctgtgttctcttgggaactgtggaggg 360
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 469 actacgataggcgactatggcctctaagtcaccctgcgttctcttaggaactgtggaggg 410
Query: 361 tctttgagacgtcctctgtattaatcatcttttccccctcgtggctgtgtaaagtgaacc 420
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 409 tctttgagacgtcctctgtattaatcaccgtttccccctcgtggctgtgtaaagtgaacc 350
Query: 421 caaggaagaaagattttctactggctcacagtgtgaaggcacagtccgtcatggtgagga 480
||||||||||||||| |||||||||| | ||||||||||||||||||||
Sbjct: 349 caaggaagaaagattgtctactggct-----t--------acagtccgtcatggtgagga 303
Query: 481 aggcatggttgttggctatggctggtcatgttgtgtccatagtttggaagcagagagaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aggcatggttgttggctatggctggtcatgttgtgtccatagtttggaagcagagagaga 243
Query: 541 agagcgcccatgctcagcttgctgtcttcttttta 575
|||||||||||||||||||||||||||||||||||
Sbjct: 242 agagcgcccatgctcagcttgctgtcttcttttta 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
